RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 SLC52A2Q9HAB3 445 aa21.69■■□□□ 1.06
VPS51-216ENST00000534591 CACNA1FO60840 1977 aa21.69■■□□□ 1.06
VPS51-216ENST00000534591 BCL9O00512 1426 aa21.69■■□□□ 1.06
VPS51-216ENST00000534591 ABCC4O15439 1325 aa21.68■■□□□ 1.06
VPS51-216ENST00000534591 MRC1P22897 1456 aa21.68■■□□□ 1.06
VPS51-216ENST00000534591 APBA3O96018 575 aa21.67■■□□□ 1.06
VPS51-216ENST00000534591 KDM2BQ8NHM5 1336 aa21.67■■□□□ 1.06
VPS51-216ENST00000534591 SLC4A2P04920 1241 aa21.66■■□□□ 1.06
VPS51-216ENST00000534591 NKX1-1Q15270 411 aaPredicted RBP21.65■■□□□ 1.06
VPS51-216ENST00000534591 CAMKK2Q96RR4 588 aa21.65■■□□□ 1.06
VPS51-216ENST00000534591 HEG1Q9ULI3 1381 aa21.64■■□□□ 1.05
VPS51-216ENST00000534591 KCNQ3O43525 872 aa21.63■■□□□ 1.05
VPS51-216ENST00000534591 HDGFL1Q5TGJ6 251 aa21.63■■□□□ 1.05
VPS51-216ENST00000534591 TOGARAM1Q9Y4F4 1720 aa21.62■■□□□ 1.05
VPS51-216ENST00000534591 ERVV-2B6SEH9 535 aa21.61■■□□□ 1.05
VPS51-216ENST00000534591 KCNQ2O43526 872 aa21.61■■□□□ 1.05
VPS51-216ENST00000534591 INTS3Q68E01 1043 aaKnown RBP21.61■■□□□ 1.05
VPS51-216ENST00000534591 NFATC2IPQ8NCF5 419 aa21.61■■□□□ 1.05
VPS51-216ENST00000534591 ACSBG1Q96GR2 724 aa21.61■■□□□ 1.05
VPS51-216ENST00000534591 ZBTB40Q9NUA8 1239 aa21.61■■□□□ 1.05
VPS51-216ENST00000534591 CABP4P57796 275 aa21.6■■□□□ 1.05
VPS51-216ENST00000534591 ZNF790Q6PG37 636 aa21.6■■□□□ 1.05
VPS51-216ENST00000534591 GIGYF1O75420 1035 aaPredicted RBP21.6■■□□□ 1.05
VPS51-216ENST00000534591 DDX54Q8TDD1 881 aaKnown RBP21.6■■□□□ 1.05
VPS51-216ENST00000534591 BCL11BQ9C0K0 894 aaPredicted RBP21.6■■□□□ 1.05
VPS51-216ENST00000534591 PCDHB15Q9Y5E8 787 aa21.6■■□□□ 1.05
VPS51-216ENST00000534591 ITGB4P16144 1822 aa21.59■■□□□ 1.05
VPS51-216ENST00000534591 RWDD1Q9H446 243 aaPredicted RBP21.59■■□□□ 1.05
VPS51-216ENST00000534591 PSDA5PKW4 1024 aaPredicted RBP21.58■■□□□ 1.04
VPS51-216ENST00000534591 ZBTB7BO15156 539 aaPredicted RBP21.58■■□□□ 1.04
VPS51-216ENST00000534591 FLIIQ13045 1269 aa21.57■■□□□ 1.04
VPS51-216ENST00000534591 G2E3Q7L622 706 aa21.57■■□□□ 1.04
VPS51-216ENST00000534591 IGHDP01880 384 aa21.56■■□□□ 1.04
VPS51-216ENST00000534591 NECTIN2Q92692 538 aa21.56■■□□□ 1.04
VPS51-216ENST00000534591 EIF2S2P20042 333 aaKnown RBP21.55■■□□□ 1.04
VPS51-216ENST00000534591 TTC5Q8N0Z6 440 aa21.55■■□□□ 1.04
VPS51-216ENST00000534591 CCT4P50991 539 aaKnown RBP21.55■■□□□ 1.04
VPS51-216ENST00000534591 DBF4Q9UBU7 674 aaPredicted RBP21.55■■□□□ 1.04
VPS51-216ENST00000534591 SLC39A6Q13433 755 aa21.54■■□□□ 1.04
VPS51-216ENST00000534591 HDAC1Q13547 482 aaPredicted RBP21.54■■□□□ 1.04
VPS51-216ENST00000534591 LY75O60449 1722 aa21.54■■□□□ 1.04
VPS51-216ENST00000534591 PLSCR1O15162 318 aa21.53■■□□□ 1.04
VPS51-216ENST00000534591 FKBP5Q13451 457 aaPredicted RBP21.53■■□□□ 1.04
VPS51-216ENST00000534591 FMNL2Q96PY5 1086 aa21.53■■□□□ 1.04
VPS51-216ENST00000534591 R3HDM1Q15032 1099 aaKnown RBP21.52■■□□□ 1.04
VPS51-216ENST00000534591 PROM2Q8N271 834 aa21.52■■□□□ 1.04
VPS51-216ENST00000534591 CHPF2Q9P2E5 772 aa21.52■■□□□ 1.04
VPS51-216ENST00000534591 PAPPAQ13219 1627 aa21.52■■□□□ 1.03
VPS51-216ENST00000534591 SNRPA1P09661 255 aaKnown RBP21.51■■□□□ 1.03
VPS51-216ENST00000534591 ZNF496Q96IT1 587 aaPredicted RBP21.51■■□□□ 1.03
VPS51-216ENST00000534591 PXDNLA1KZ92 1463 aa21.51■■□□□ 1.03
VPS51-216ENST00000534591 TSHZ2Q9NRE2 1034 aa21.5■■□□□ 1.03
VPS51-216ENST00000534591 LRP5O75197 1615 aa21.5■■□□□ 1.03
VPS51-216ENST00000534591 HYPKQ9NX55 129 aa21.5■■□□□ 1.03
VPS51-216ENST00000534591 ANO8Q9HCE9 1232 aaPredicted RBP21.49■■□□□ 1.03
VPS51-216ENST00000534591 DDX21Q9NR30 783 aaKnown RBP eCLIP21.49■■□□□ 1.03
VPS51-216ENST00000534591 TUBGCP6Q96RT7 1819 aa21.48■■□□□ 1.03
VPS51-216ENST00000534591 CASZ1Q86V15 1759 aa21.48■■□□□ 1.03
VPS51-216ENST00000534591 F6X3S4 739 aa21.48■■□□□ 1.03
VPS51-216ENST00000534591 PHAXQ9H814 394 aaKnown RBP21.48■■□□□ 1.03
VPS51-216ENST00000534591 N4BP2Q86UW6 1770 aaPredicted RBP21.48■■□□□ 1.03
VPS51-216ENST00000534591 PRIM1P49642 420 aaKnown RBP21.47■■□□□ 1.03
VPS51-216ENST00000534591 SLC4A10Q6U841 1118 aa21.47■■□□□ 1.03
VPS51-216ENST00000534591 TMOD3Q9NYL9 352 aa21.47■■□□□ 1.03
VPS51-216ENST00000534591 UBR2Q8IWV8 1755 aa21.46■■□□□ 1.03
VPS51-216ENST00000534591 PRAMEF22A3QJZ6 481 aa21.46■■□□□ 1.03
VPS51-216ENST00000534591 TXNRD1Q16881 649 aa21.46■■□□□ 1.03
VPS51-216ENST00000534591 SYTL4Q96C24 671 aaPredicted RBP21.46■■□□□ 1.03
VPS51-216ENST00000534591 C5P01031 1676 aa21.46■■□□□ 1.03
VPS51-216ENST00000534591 TAF1LQ8IZX4 1826 aa21.44■■□□□ 1.02
VPS51-216ENST00000534591 ERBB4Q15303 1308 aa21.43■■□□□ 1.02
VPS51-216ENST00000534591 PDIA6Q15084 440 aa21.43■■□□□ 1.02
VPS51-216ENST00000534591 SMC5Q8IY18 1101 aa21.43■■□□□ 1.02
VPS51-216ENST00000534591 DNAAF4Q8WXU2 420 aa21.43■■□□□ 1.02
VPS51-216ENST00000534591 LAMB4A4D0S4 1761 aa21.43■■□□□ 1.02
VPS51-216ENST00000534591 KCPQ6ZWJ8 1503 aa21.42■■□□□ 1.02
VPS51-216ENST00000534591 DDX58O95786 925 aaKnown RBP21.42■■□□□ 1.02
VPS51-216ENST00000534591 GNAI3P08754 354 aa21.42■■□□□ 1.02
VPS51-216ENST00000534591 USP16Q9Y5T5 823 aa21.42■■□□□ 1.02
VPS51-216ENST00000534591 ANXA1P04083 346 aa21.41■■□□□ 1.02
VPS51-216ENST00000534591 PROSER3Q2NL68 480 aa21.41■■□□□ 1.02
VPS51-216ENST00000534591 RPAP2Q8IXW5 612 aaPredicted RBP21.41■■□□□ 1.02
VPS51-216ENST00000534591 MEIS3Q99687 375 aa21.41■■□□□ 1.02
VPS51-216ENST00000534591 ATP10DQ9P241 1426 aa21.41■■□□□ 1.02
VPS51-216ENST00000534591 PI4KAP2A4QPH2 592 aa21.4■■□□□ 1.02
VPS51-216ENST00000534591 KSR2Q6VAB6 950 aa21.4■■□□□ 1.02
VPS51-216ENST00000534591 PI4KAP1Q8N8J0 262 aa21.4■■□□□ 1.02
VPS51-216ENST00000534591 PIGBQ92521 554 aa21.4■■□□□ 1.02
VPS51-216ENST00000534591 C1orf115Q9H7X2 142 aa21.4■■□□□ 1.02
VPS51-216ENST00000534591 LRRC4BQ9NT99 713 aa21.4■■□□□ 1.02
VPS51-216ENST00000534591 ADCY9O60503 1353 aa21.4■■□□□ 1.02
VPS51-216ENST00000534591 KCNQ4P56696 695 aa21.39■■□□□ 1.02
VPS51-216ENST00000534591 NBPF14Q5TI25 921 aa21.39■■□□□ 1.02
VPS51-216ENST00000534591 ANKRD44Q8N8A2 993 aa21.39■■□□□ 1.02
VPS51-216ENST00000534591 GCC1Q96CN9 775 aa21.39■■□□□ 1.02
VPS51-216ENST00000534591 SRCIN1Q9C0H9 1055 aa21.39■■□□□ 1.02
VPS51-216ENST00000534591 QSER1Q2KHR3 1735 aa21.39■■□□□ 1.02
VPS51-216ENST00000534591 VSIG10Q8N0Z9 540 aa21.39■■□□□ 1.01
VPS51-216ENST00000534591 PDGFDQ9GZP0 370 aaPredicted RBP21.39■■□□□ 1.01
VPS51-216ENST00000534591 PDZRN3Q9UPQ7 1066 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms