RNA–Protein interactions for RNA: ENST00000534011.5

FOXRED1-217, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 1,955 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-217ENST00000534011 USP48Q86UV5 1035 aa16.77■□□□□ 0.27
FOXRED1-217ENST00000534011 RNF214Q8ND24 703 aa16.77■□□□□ 0.27
FOXRED1-217ENST00000534011 USP44Q9H0E7 712 aa16.77■□□□□ 0.27
FOXRED1-217ENST00000534011 POLA2Q14181 598 aa16.76■□□□□ 0.27
FOXRED1-217ENST00000534011 CCDC183Q5T5S1 534 aa16.76■□□□□ 0.27
FOXRED1-217ENST00000534011 UNC5CLQ8IV45 518 aa16.76■□□□□ 0.27
FOXRED1-217ENST00000534011 TSPOAP1O95153 1857 aa16.76■□□□□ 0.27
FOXRED1-217ENST00000534011 KIAA2012Q0VF49 1180 aa16.75■□□□□ 0.27
FOXRED1-217ENST00000534011 NOL8Q76FK4 1167 aaKnown RBP16.75■□□□□ 0.27
FOXRED1-217ENST00000534011 UPF3BQ9BZI7 483 aaKnown RBP16.75■□□□□ 0.27
FOXRED1-217ENST00000534011 SGSM2O43147 1006 aa16.75■□□□□ 0.27
FOXRED1-217ENST00000534011 RBM10P98175 930 aaKnown RBP16.75■□□□□ 0.27
FOXRED1-217ENST00000534011 TTC14Q96N46 770 aa16.75■□□□□ 0.27
FOXRED1-217ENST00000534011 ESF1Q9H501 851 aaKnown RBP16.75■□□□□ 0.27
FOXRED1-217ENST00000534011 GADD45BO75293 160 aaPredicted RBP16.74■□□□□ 0.27
FOXRED1-217ENST00000534011 PTMAP06454 111 aaKnown RBP16.74■□□□□ 0.27
FOXRED1-217ENST00000534011 MLECQ14165 292 aa16.74■□□□□ 0.27
FOXRED1-217ENST00000534011 CRYBG1Q9Y4K1 1723 aa16.74■□□□□ 0.27
FOXRED1-217ENST00000534011 MAP3K5Q99683 1374 aa16.74■□□□□ 0.27
FOXRED1-217ENST00000534011 ZSCAN22P10073 491 aaPredicted RBP16.73■□□□□ 0.27
FOXRED1-217ENST00000534011 TAF7Q15545 349 aaPredicted RBP16.73■□□□□ 0.27
FOXRED1-217ENST00000534011 PI4K2BQ8TCG2 481 aa16.73■□□□□ 0.27
FOXRED1-217ENST00000534011 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.73■□□□□ 0.27
FOXRED1-217ENST00000534011 ATP6V1DQ9Y5K8 247 aa16.73■□□□□ 0.27
FOXRED1-217ENST00000534011 AMPHP49418 695 aa16.73■□□□□ 0.27
FOXRED1-217ENST00000534011 UBE2HP62256 183 aa16.73■□□□□ 0.27
FOXRED1-217ENST00000534011 KIF1BPQ96EK5 621 aa16.73■□□□□ 0.27
FOXRED1-217ENST00000534011 CHMP4AQ9BY43 222 aa16.73■□□□□ 0.27
FOXRED1-217ENST00000534011 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
FOXRED1-217ENST00000534011 FAM13BQ9NYF5 915 aa16.72■□□□□ 0.27
FOXRED1-217ENST00000534011 LIMCH1Q9UPQ0 1083 aa16.72■□□□□ 0.27
FOXRED1-217ENST00000534011 SNX14Q9Y5W7 946 aa16.72■□□□□ 0.27
FOXRED1-217ENST00000534011 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.72■□□□□ 0.27
FOXRED1-217ENST00000534011 HSP90AB4PQ58FF6 505 aa16.71■□□□□ 0.27
FOXRED1-217ENST00000534011 CNTROBQ8N137 903 aa16.71■□□□□ 0.27
FOXRED1-217ENST00000534011 RHPN1Q8TCX5 695 aa16.71■□□□□ 0.27
FOXRED1-217ENST00000534011 LSG1Q9H089 658 aaKnown RBP16.71■□□□□ 0.27
FOXRED1-217ENST00000534011 IL25Q9H293 177 aa16.71■□□□□ 0.27
FOXRED1-217ENST00000534011 NWD1Q149M9 1564 aa16.71■□□□□ 0.27
FOXRED1-217ENST00000534011 PIK3C2AO00443 1686 aa16.71■□□□□ 0.27
FOXRED1-217ENST00000534011 USP54Q70EL1 1684 aa16.71■□□□□ 0.27
FOXRED1-217ENST00000534011 TCHHQ07283 1943 aa16.71■□□□□ 0.27
FOXRED1-217ENST00000534011 PPP1R42Q7Z4L9 355 aa16.7■□□□□ 0.26
FOXRED1-217ENST00000534011 IL17REQ8NFR9 667 aa16.7■□□□□ 0.26
FOXRED1-217ENST00000534011 IL1RAPL2Q9NP60 686 aa16.7■□□□□ 0.26
FOXRED1-217ENST00000534011 SOX12O15370 315 aa16.69■□□□□ 0.26
FOXRED1-217ENST00000534011 STX6O43752 255 aa16.69■□□□□ 0.26
FOXRED1-217ENST00000534011 SURF6O75683 361 aaKnown RBP16.69■□□□□ 0.26
FOXRED1-217ENST00000534011 PIBF1Q8WXW3 757 aa16.69■□□□□ 0.26
FOXRED1-217ENST00000534011 PRIMPOLQ96LW4 560 aa16.69■□□□□ 0.26
FOXRED1-217ENST00000534011 GDPD2Q9HCC8 539 aa16.69■□□□□ 0.26
FOXRED1-217ENST00000534011 TTC41PQ6P2S7 1318 aa16.69■□□□□ 0.26
FOXRED1-217ENST00000534011 HOXB7P09629 217 aa16.69■□□□□ 0.26
FOXRED1-217ENST00000534011 NUTM1Q86Y26 1132 aa16.69■□□□□ 0.26
FOXRED1-217ENST00000534011 PDIA4P13667 645 aaKnown RBP16.68■□□□□ 0.26
FOXRED1-217ENST00000534011 SYT1P21579 422 aa16.68■□□□□ 0.26
FOXRED1-217ENST00000534011 F13A1P00488 732 aa16.68■□□□□ 0.26
FOXRED1-217ENST00000534011 AK2P54819 239 aa16.68■□□□□ 0.26
FOXRED1-217ENST00000534011 FOXD4L6Q3SYB3 417 aaPredicted RBP16.68■□□□□ 0.26
FOXRED1-217ENST00000534011 HDGFL1Q5TGJ6 251 aa16.68■□□□□ 0.26
FOXRED1-217ENST00000534011 FOXD4L3Q6VB84 417 aaPredicted RBP16.68■□□□□ 0.26
FOXRED1-217ENST00000534011 RUFY3Q7L099 469 aa16.68■□□□□ 0.26
FOXRED1-217ENST00000534011 MYRIPQ8NFW9 859 aa16.68■□□□□ 0.26
FOXRED1-217ENST00000534011 TM6SF1Q9BZW5 370 aa16.68■□□□□ 0.26
FOXRED1-217ENST00000534011 SMC3Q9UQE7 1217 aa16.68■□□□□ 0.26
FOXRED1-217ENST00000534011 DIP2AQ14689 1571 aa16.67■□□□□ 0.26
FOXRED1-217ENST00000534011 NUTM2FA1L443 756 aa16.67■□□□□ 0.26
FOXRED1-217ENST00000534011 HMGN5P82970 282 aaKnown RBP16.67■□□□□ 0.26
FOXRED1-217ENST00000534011 RUFY2Q8WXA3 655 aa16.67■□□□□ 0.26
FOXRED1-217ENST00000534011 KCNB2Q92953 911 aa16.67■□□□□ 0.26
FOXRED1-217ENST00000534011 ZSCAN31Q96LW9 406 aaPredicted RBP16.67■□□□□ 0.26
FOXRED1-217ENST00000534011 CNPY2Q9Y2B0 182 aa16.67■□□□□ 0.26
FOXRED1-217ENST00000534011 GLRX3O76003 335 aaKnown RBP16.66■□□□□ 0.26
FOXRED1-217ENST00000534011 HOXC9P31274 260 aa16.66■□□□□ 0.26
FOXRED1-217ENST00000534011 NGDNQ8NEJ9 315 aaKnown RBP16.66■□□□□ 0.26
FOXRED1-217ENST00000534011 SH2B1Q9NRF2 756 aaPredicted RBP16.66■□□□□ 0.26
FOXRED1-217ENST00000534011 SPTLC3Q9NUV7 552 aa16.66■□□□□ 0.26
FOXRED1-217ENST00000534011 CEMIPQ8WUJ3 1361 aa16.66■□□□□ 0.26
FOXRED1-217ENST00000534011 ANKARQ7Z5J8 1434 aa16.66■□□□□ 0.26
FOXRED1-217ENST00000534011 SRGAP3O43295 1099 aa16.66■□□□□ 0.26
FOXRED1-217ENST00000534011 VPS53Q5VIR6 699 aa16.66■□□□□ 0.26
FOXRED1-217ENST00000534011 RASEFQ8IZ41 740 aa16.66■□□□□ 0.26
FOXRED1-217ENST00000534011 NECTIN2Q92692 538 aa16.66■□□□□ 0.26
FOXRED1-217ENST00000534011 FUCA2Q9BTY2 467 aa16.66■□□□□ 0.26
FOXRED1-217ENST00000534011 MED1Q15648 1581 aaPredicted RBP16.66■□□□□ 0.26
FOXRED1-217ENST00000534011 KDM4AO75164 1064 aa16.65■□□□□ 0.26
FOXRED1-217ENST00000534011 ADCY5O95622 1261 aa16.65■□□□□ 0.26
FOXRED1-217ENST00000534011 LTKP29376 864 aa16.65■□□□□ 0.26
FOXRED1-217ENST00000534011 GTF2F1P35269 517 aaKnown RBP eCLIP16.65■□□□□ 0.262e-18■■■■■ 58.6
FOXRED1-217ENST00000534011 MTX1Q13505 466 aa16.65■□□□□ 0.26
FOXRED1-217ENST00000534011 HYPKQ9NX55 129 aa16.65■□□□□ 0.26
FOXRED1-217ENST00000534011 USP25Q9UHP3 1055 aa16.65■□□□□ 0.26
FOXRED1-217ENST00000534011 MARF1Q9Y4F3 1742 aaKnown RBP16.64■□□□□ 0.25
FOXRED1-217ENST00000534011 TPM3P06753 285 aa16.64■□□□□ 0.25
FOXRED1-217ENST00000534011 NOLC1Q14978 699 aaKnown RBP eCLIP16.64■□□□□ 0.25
FOXRED1-217ENST00000534011 KIF13AQ9H1H9 1805 aa16.64■□□□□ 0.25
FOXRED1-217ENST00000534011 BEND3Q5T5X7 828 aa16.64■□□□□ 0.25
FOXRED1-217ENST00000534011 PHAXQ9H814 394 aaKnown RBP16.64■□□□□ 0.25
FOXRED1-217ENST00000534011 HCLS1P14317 486 aaPredicted RBP16.63■□□□□ 0.25
FOXRED1-217ENST00000534011 DNAAF4Q8WXU2 420 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 297 ms