RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 COL15A1P39059 1388 aa29.52■■■□□ 2.32
BEST1-207ENST00000533521 ZPR1O75312 459 aa29.52■■■□□ 2.32
BEST1-207ENST00000533521 TGFB2P61812 414 aa29.52■■■□□ 2.32
BEST1-207ENST00000533521 NFE2L2Q16236 605 aa29.52■■■□□ 2.32
BEST1-207ENST00000533521 PARP3Q9Y6F1 533 aa29.52■■■□□ 2.32
BEST1-207ENST00000533521 C10orf71Q711Q0 1435 aa29.52■■■□□ 2.32
BEST1-207ENST00000533521 EIF5P55010 431 aaKnown RBP29.51■■■□□ 2.31
BEST1-207ENST00000533521 TAF7Q15545 349 aaPredicted RBP29.51■■■□□ 2.31
BEST1-207ENST00000533521 SRP68Q9UHB9 627 aaKnown RBP29.51■■■□□ 2.31
BEST1-207ENST00000533521 UTRNP46939 3433 aa29.5■■■□□ 2.31
BEST1-207ENST00000533521 MAPK8IP3Q9UPT6 1336 aa29.49■■■□□ 2.31
BEST1-207ENST00000533521 A0A087WZG4 1122 aa29.49■■■□□ 2.31
BEST1-207ENST00000533521 YBX3P16989 372 aaKnown RBP eCLIP29.49■■■□□ 2.31
BEST1-207ENST00000533521 TM4SF1P30408 202 aa29.49■■■□□ 2.31
BEST1-207ENST00000533521 FKBP8Q14318 412 aa29.49■■■□□ 2.31
BEST1-207ENST00000533521 IL6STP40189 918 aaPredicted RBP29.48■■■□□ 2.31
BEST1-207ENST00000533521 PNISRQ8TF01 805 aaKnown RBP29.48■■■□□ 2.31
BEST1-207ENST00000533521 DCTN1Q14203 1278 aa29.47■■■□□ 2.31
BEST1-207ENST00000533521 KIAA1551Q9HCM1 1747 aa29.47■■■□□ 2.31
BEST1-207ENST00000533521 KCNQ3O43525 872 aa29.46■■■□□ 2.31
BEST1-207ENST00000533521 USPL1Q5W0Q7 1092 aa29.46■■■□□ 2.31
BEST1-207ENST00000533521 PELP1Q8IZL8 1130 aaKnown RBP29.46■■■□□ 2.31
BEST1-207ENST00000533521 PRKRIP1Q9H875 184 aaPredicted RBP29.46■■■□□ 2.31
BEST1-207ENST00000533521 GOLGB1Q14789 3259 aaKnown RBP29.45■■■□□ 2.31
BEST1-207ENST00000533521 SNRPA1P09661 255 aaKnown RBP29.45■■■□□ 2.31
BEST1-207ENST00000533521 CANXP27824 592 aaKnown RBP29.45■■■□□ 2.31
BEST1-207ENST00000533521 PXDNLA1KZ92 1463 aa29.44■■■□□ 2.3
BEST1-207ENST00000533521 DDR1Q08345 913 aa29.43■■■□□ 2.3
BEST1-207ENST00000533521 POLRMTO00411 1230 aaKnown RBP29.42■■■□□ 2.3
BEST1-207ENST00000533521 KDM3BQ7LBC6 1761 aa29.41■■■□□ 2.3
BEST1-207ENST00000533521 BCL2L12Q9HB09 334 aa29.41■■■□□ 2.3
BEST1-207ENST00000533521 NRXN2Q9P2S2 1712 aa29.4■■■□□ 2.3
BEST1-207ENST00000533521 USP16Q9Y5T5 823 aa29.4■■■□□ 2.3
BEST1-207ENST00000533521 BRCA1P38398 1863 aaKnown RBP29.39■■■□□ 2.3
BEST1-207ENST00000533521 N4BP2Q86UW6 1770 aaPredicted RBP29.39■■■□□ 2.29
BEST1-207ENST00000533521 SCN7AQ01118 1682 aa29.38■■■□□ 2.29
BEST1-207ENST00000533521 A1BGP04217 495 aa29.38■■■□□ 2.29
BEST1-207ENST00000533521 LMOD3Q0VAK6 560 aa29.38■■■□□ 2.29
BEST1-207ENST00000533521 NFIXQ14938 502 aa29.38■■■□□ 2.29
BEST1-207ENST00000533521 NPM2Q86SE8 214 aaKnown RBP29.38■■■□□ 2.29
BEST1-207ENST00000533521 BABAM1Q9NWV8 329 aa29.38■■■□□ 2.29
BEST1-207ENST00000533521 AFDNP55196 1824 aaKnown RBP29.37■■■□□ 2.29
BEST1-207ENST00000533521 RGL2O15211 777 aa29.37■■■□□ 2.29
BEST1-207ENST00000533521 TMPOP42166 694 aaKnown RBP29.36■■■□□ 2.29
BEST1-207ENST00000533521 ZNF784Q8NCA9 323 aaPredicted RBP29.36■■■□□ 2.29
BEST1-207ENST00000533521 LAMB4A4D0S4 1761 aa29.35■■■□□ 2.29
BEST1-207ENST00000533521 WDR43Q15061 677 aaKnown RBP eCLIP29.35■■■□□ 2.29
BEST1-207ENST00000533521 A0A0G2JLW4 131 aa29.34■■■□□ 2.29
BEST1-207ENST00000533521 RIPK4P57078 832 aa29.34■■■□□ 2.29
BEST1-207ENST00000533521 RUNDC1Q96C34 613 aa29.34■■■□□ 2.29
BEST1-207ENST00000533521 DPEP1P16444 411 aa29.33■■■□□ 2.29
BEST1-207ENST00000533521 BCORQ6W2J9 1755 aa29.32■■■□□ 2.28
BEST1-207ENST00000533521 KCNA3P22001 575 aa29.32■■■□□ 2.28
BEST1-207ENST00000533521 PRAMEF22A3QJZ6 481 aa29.31■■■□□ 2.28
BEST1-207ENST00000533521 GIGYF1O75420 1035 aaPredicted RBP29.31■■■□□ 2.28
BEST1-207ENST00000533521 SERPINB2P05120 415 aa29.31■■■□□ 2.28
BEST1-207ENST00000533521 EIF4A1P60842 406 aaKnown RBP29.31■■■□□ 2.28
BEST1-207ENST00000533521 CLEC4GQ6UXB4 293 aa29.31■■■□□ 2.28
BEST1-207ENST00000533521 MIS18AQ9NYP9 233 aa29.31■■■□□ 2.28
BEST1-207ENST00000533521 ARFGEF1Q9Y6D6 1849 aa29.31■■■□□ 2.28
BEST1-207ENST00000533521 CAMTA2O94983 1202 aa29.3■■■□□ 2.28
BEST1-207ENST00000533521 THUMPD2Q9BTF0 503 aaKnown RBP29.3■■■□□ 2.28
BEST1-207ENST00000533521 TBC1D2BQ9UPU7 963 aa29.3■■■□□ 2.28
BEST1-207ENST00000533521 DZIP3Q86Y13 1208 aaKnown RBP29.29■■■□□ 2.28
BEST1-207ENST00000533521 PIM2Q9P1W9 311 aa29.29■■■□□ 2.28
BEST1-207ENST00000533521 ADAMTS8Q9UP79 889 aa29.29■■■□□ 2.28
BEST1-207ENST00000533521 NBPF26B4DH59 902 aa29.27■■■□□ 2.28
BEST1-207ENST00000533521 TBC1D9BQ66K14 1250 aa29.27■■■□□ 2.28
BEST1-207ENST00000533521 NBPF10Q6P3W6 841 aaKnown RBP29.27■■■□□ 2.28
BEST1-207ENST00000533521 NBPF15Q8N660 670 aa29.27■■■□□ 2.28
BEST1-207ENST00000533521 PDZRN3Q9UPQ7 1066 aa29.27■■■□□ 2.28
BEST1-207ENST00000533521 ZNF330Q9Y3S2 320 aaPredicted RBP29.27■■■□□ 2.28
BEST1-207ENST00000533521 CARMIL3Q8ND23 1372 aa29.26■■■□□ 2.28
BEST1-207ENST00000533521 ZNF316A6NFI3 1004 aaPredicted RBP29.25■■■□□ 2.27
BEST1-207ENST00000533521 BCS1LQ9Y276 419 aa29.25■■■□□ 2.27
BEST1-207ENST00000533521 ZNF652Q9Y2D9 606 aa29.25■■■□□ 2.27
BEST1-207ENST00000533521 ERBB4Q15303 1308 aa29.24■■■□□ 2.27
BEST1-207ENST00000533521 DLEC1Q9Y238 1755 aa29.24■■■□□ 2.27
BEST1-207ENST00000533521 SETDB2Q96T68 719 aa29.24■■■□□ 2.27
BEST1-207ENST00000533521 TSPYL4Q9UJ04 414 aa29.24■■■□□ 2.27
BEST1-207ENST00000533521 ADCY9O60503 1353 aa29.23■■■□□ 2.27
BEST1-207ENST00000533521 DALRD3Q5D0E6 543 aaKnown RBP29.22■■■□□ 2.27
BEST1-207ENST00000533521 CCDC146Q8IYE0 955 aa29.22■■■□□ 2.27
BEST1-207ENST00000533521 BRIP1Q9BX63 1249 aa29.21■■■□□ 2.27
BEST1-207ENST00000533521 TRIM35Q9UPQ4 493 aa29.21■■■□□ 2.27
BEST1-207ENST00000533521 BICDL1Q6ZP65 573 aa29.2■■■□□ 2.26
BEST1-207ENST00000533521 WWC3Q9ULE0 1092 aa29.2■■■□□ 2.26
BEST1-207ENST00000533521 CHL1O00533 1208 aa29.19■■■□□ 2.26
BEST1-207ENST00000533521 CHRNA5P30532 468 aa29.19■■■□□ 2.26
BEST1-207ENST00000533521 PIP4K2AP48426 406 aaPredicted RBP29.19■■■□□ 2.26
BEST1-207ENST00000533521 ERVV-1B6SEH8 477 aa29.18■■■□□ 2.26
BEST1-207ENST00000533521 ANKRD31Q8N7Z5 1873 aa29.18■■■□□ 2.26
BEST1-207ENST00000533521 PDE6BP35913 854 aa29.17■■■□□ 2.26
BEST1-207ENST00000533521 PRR5LQ6MZQ0 368 aa29.17■■■□□ 2.26
BEST1-207ENST00000533521 RRP7AQ9Y3A4 280 aaKnown RBP29.17■■■□□ 2.26
BEST1-207ENST00000533521 H0YIN7 160 aa29.16■■■□□ 2.26
BEST1-207ENST00000533521 NEUROD2Q15784 382 aa29.15■■■□□ 2.26
BEST1-207ENST00000533521 ARHGAP27Q6ZUM4 889 aa29.15■■■□□ 2.26
BEST1-207ENST00000533521 CNBD1Q8NA66 436 aa29.15■■■□□ 2.26
BEST1-207ENST00000533521 C2CD5Q86YS7 1000 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms