RNA–Protein interactions for RNA: ENST00000532334.1

CTTN-214, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-214ENST00000532334 PDGFDQ9GZP0 370 aaPredicted RBP9.06□□□□□ -0.96
CTTN-214ENST00000532334 TSPYL4Q9UJ04 414 aa9.06□□□□□ -0.96
CTTN-214ENST00000532334 CASZ1Q86V15 1759 aa9.05□□□□□ -0.96
CTTN-214ENST00000532334 GNAI1P63096 354 aa9.05□□□□□ -0.96
CTTN-214ENST00000532334 PPP4R3CPQ6ZMV5 832 aa9.05□□□□□ -0.96
CTTN-214ENST00000532334 COL23A1Q86Y22 540 aaPredicted RBP9.05□□□□□ -0.96
CTTN-214ENST00000532334 CCDC87Q9NVE4 849 aa9.05□□□□□ -0.96
CTTN-214ENST00000532334 RTCBQ9Y3I0 505 aaKnown RBP9.05□□□□□ -0.96
CTTN-214ENST00000532334 USP16Q9Y5T5 823 aa9.05□□□□□ -0.96
CTTN-214ENST00000532334 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.04□□□□□ -0.96
CTTN-214ENST00000532334 PRAMEF22A3QJZ6 481 aa9.04□□□□□ -0.96
CTTN-214ENST00000532334 GNPATO15228 680 aa9.04□□□□□ -0.96
CTTN-214ENST00000532334 EIF5P55010 431 aaKnown RBP9.04□□□□□ -0.96
CTTN-214ENST00000532334 MBIPQ9NS73 344 aa9.04□□□□□ -0.96
CTTN-214ENST00000532334 UBR3Q6ZT12 1888 aa9.04□□□□□ -0.96
CTTN-214ENST00000532334 SOS1Q07889 1333 aaPredicted RBP9.04□□□□□ -0.96
CTTN-214ENST00000532334 MYH14Q7Z406 1995 aaKnown RBP9.03□□□□□ -0.96
CTTN-214ENST00000532334 HOXB7P09629 217 aa9.03□□□□□ -0.96
CTTN-214ENST00000532334 IL6STP40189 918 aaPredicted RBP9.03□□□□□ -0.96
CTTN-214ENST00000532334 TRAPPC3LQ5T215 181 aa9.03□□□□□ -0.96
CTTN-214ENST00000532334 ARHGEF1Q92888 912 aaKnown RBP9.03□□□□□ -0.96
CTTN-214ENST00000532334 SGIP1Q9BQI5 828 aa9.03□□□□□ -0.96
CTTN-214ENST00000532334 MTFR1LQ9H019 292 aa9.03□□□□□ -0.96
CTTN-214ENST00000532334 ZBTB1Q9Y2K1 713 aa9.03□□□□□ -0.96
CTTN-214ENST00000532334 TUBGCP6Q96RT7 1819 aa9.03□□□□□ -0.96
CTTN-214ENST00000532334 A1BGP04217 495 aa9.02□□□□□ -0.97
CTTN-214ENST00000532334 SMIM5Q71RC9 77 aa9.02□□□□□ -0.97
CTTN-214ENST00000532334 LAS1LQ9Y4W2 734 aaKnown RBP9.02□□□□□ -0.97
CTTN-214ENST00000532334 ERBB4Q15303 1308 aa9.02□□□□□ -0.97
CTTN-214ENST00000532334 NBPF26B4DH59 902 aa9.01□□□□□ -0.97
CTTN-214ENST00000532334 PTGER2P43116 358 aa9.01□□□□□ -0.97
CTTN-214ENST00000532334 COL24A1Q17RW2 1714 aa9.01□□□□□ -0.97
CTTN-214ENST00000532334 KRT24Q2M2I5 525 aa9.01□□□□□ -0.97
CTTN-214ENST00000532334 NBPF10Q6P3W6 841 aaKnown RBP9.01□□□□□ -0.97
CTTN-214ENST00000532334 LRP10Q7Z4F1 713 aa9.01□□□□□ -0.97
CTTN-214ENST00000532334 NBPF15Q8N660 670 aa9.01□□□□□ -0.97
CTTN-214ENST00000532334 SPON1Q9HCB6 807 aa9.01□□□□□ -0.97
CTTN-214ENST00000532334 SPINK5Q9NQ38 1064 aaPredicted RBP9.01□□□□□ -0.97
CTTN-214ENST00000532334 COL15A1P39059 1388 aa9□□□□□ -0.97
CTTN-214ENST00000532334 A0A087WZG4 1122 aa9□□□□□ -0.97
CTTN-214ENST00000532334 SENP3-EIF4A1A0A087X0R7 540 aa9□□□□□ -0.97
CTTN-214ENST00000532334 RGL2O15211 777 aa9□□□□□ -0.97
CTTN-214ENST00000532334 PHF14O94880 888 aa9□□□□□ -0.97
CTTN-214ENST00000532334 ZBTB7AO95365 584 aa9□□□□□ -0.97
CTTN-214ENST00000532334 GYS1P13807 737 aa9□□□□□ -0.97
CTTN-214ENST00000532334 CANXP27824 592 aaKnown RBP9□□□□□ -0.97
CTTN-214ENST00000532334 RFC4P35249 363 aa9□□□□□ -0.97
CTTN-214ENST00000532334 PDIA6Q15084 440 aa9□□□□□ -0.97
CTTN-214ENST00000532334 DUSP27Q5VZP5 1158 aa9□□□□□ -0.97
CTTN-214ENST00000532334 TRMT2AQ8IZ69 625 aaKnown RBP9□□□□□ -0.97
CTTN-214ENST00000532334 C8orf58Q8NAV2 365 aa9□□□□□ -0.97
CTTN-214ENST00000532334 NARFQ9UHQ1 456 aa9□□□□□ -0.97
CTTN-214ENST00000532334 SALL2Q9Y467 1007 aaPredicted RBP9□□□□□ -0.97
CTTN-214ENST00000532334 USP42Q9H9J4 1324 aaKnown RBP9□□□□□ -0.97
CTTN-214ENST00000532334 LAMB4A4D0S4 1761 aa8.99□□□□□ -0.97
CTTN-214ENST00000532334 LRP5O75197 1615 aa8.99□□□□□ -0.97
CTTN-214ENST00000532334 GOLGA2Q08379 1002 aa8.99□□□□□ -0.97
CTTN-214ENST00000532334 NLGN1Q8N2Q7 840 aa8.99□□□□□ -0.97
CTTN-214ENST00000532334 TSR2Q969E8 191 aaKnown RBP8.99□□□□□ -0.97
CTTN-214ENST00000532334 CHMP4AQ9BY43 222 aa8.99□□□□□ -0.97
CTTN-214ENST00000532334 ATF5Q9Y2D1 282 aaPredicted RBP8.99□□□□□ -0.97
CTTN-214ENST00000532334 FANCIQ9NVI1 1328 aa8.99□□□□□ -0.97
CTTN-214ENST00000532334 E9PSI1 815 aa8.98□□□□□ -0.97
CTTN-214ENST00000532334 MSH5O43196 834 aa8.98□□□□□ -0.97
CTTN-214ENST00000532334 TM4SF1P30408 202 aa8.98□□□□□ -0.97
CTTN-214ENST00000532334 SLFN5Q08AF3 891 aa8.98□□□□□ -0.97
CTTN-214ENST00000532334 TSPYL6Q8N831 410 aa8.98□□□□□ -0.97
CTTN-214ENST00000532334 MYH16Q9H6N6 1097 aa8.98□□□□□ -0.97
CTTN-214ENST00000532334 BCL2L12Q9HB09 334 aa8.98□□□□□ -0.97
CTTN-214ENST00000532334 DDX21Q9NR30 783 aaKnown RBP eCLIP8.98□□□□□ -0.97
CTTN-214ENST00000532334 C4AP0C0L4 1744 aa8.97□□□□□ -0.97
CTTN-214ENST00000532334 ERVV-1B6SEH8 477 aa8.97□□□□□ -0.97
CTTN-214ENST00000532334 ZPR1O75312 459 aa8.97□□□□□ -0.97
CTTN-214ENST00000532334 CAMTA2O94983 1202 aa8.97□□□□□ -0.97
CTTN-214ENST00000532334 EIF2S2P20042 333 aaKnown RBP8.97□□□□□ -0.97
CTTN-214ENST00000532334 PIP4K2AP48426 406 aaPredicted RBP8.97□□□□□ -0.97
CTTN-214ENST00000532334 HDGFL1Q5TGJ6 251 aa8.97□□□□□ -0.97
CTTN-214ENST00000532334 USPL1Q5W0Q7 1092 aa8.97□□□□□ -0.97
CTTN-214ENST00000532334 CLEC4GQ6UXB4 293 aa8.97□□□□□ -0.97
CTTN-214ENST00000532334 DBF4Q9UBU7 674 aaPredicted RBP8.97□□□□□ -0.97
CTTN-214ENST00000532334 SRP68Q9UHB9 627 aaKnown RBP8.97□□□□□ -0.97
CTTN-214ENST00000532334 VAMP4O75379 141 aa8.96□□□□□ -0.98
CTTN-214ENST00000532334 EXOSC9Q06265 439 aaKnown RBP8.96□□□□□ -0.98
CTTN-214ENST00000532334 FKBP8Q14318 412 aa8.96□□□□□ -0.98
CTTN-214ENST00000532334 PROSER3Q2NL68 480 aa8.96□□□□□ -0.98
CTTN-214ENST00000532334 TWISTNBQ3B726 338 aaPredicted RBP8.96□□□□□ -0.98
CTTN-214ENST00000532334 DZIP3Q86Y13 1208 aaKnown RBP8.96□□□□□ -0.98
CTTN-214ENST00000532334 TBC1D2BQ9UPU7 963 aa8.96□□□□□ -0.98
CTTN-214ENST00000532334 ELL2O00472 640 aaPredicted RBP8.95□□□□□ -0.98
CTTN-214ENST00000532334 POLD1P28340 1107 aa8.95□□□□□ -0.98
CTTN-214ENST00000532334 CCDC30Q5VVM6 783 aa8.95□□□□□ -0.98
CTTN-214ENST00000532334 MSL1Q68DK7 614 aa8.95□□□□□ -0.98
CTTN-214ENST00000532334 TTLL7Q6ZT98 887 aa8.95□□□□□ -0.98
CTTN-214ENST00000532334 NPM2Q86SE8 214 aaKnown RBP8.95□□□□□ -0.98
CTTN-214ENST00000532334 CDCA7LQ96GN5 454 aa8.95□□□□□ -0.98
CTTN-214ENST00000532334 ARXQ96QS3 562 aa8.95□□□□□ -0.98
CTTN-214ENST00000532334 HYPKQ9NX55 129 aa8.95□□□□□ -0.98
CTTN-214ENST00000532334 CHPF2Q9P2E5 772 aa8.95□□□□□ -0.98
CTTN-214ENST00000532334 POLRMTO00411 1230 aaKnown RBP8.94□□□□□ -0.98
CTTN-214ENST00000532334 MMP10P09238 476 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms