RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 USP16Q9Y5T5 823 aa28.91■■■□□ 2.22
LRRK1-208ENST00000532029 MYH16Q9H6N6 1097 aa28.9■■■□□ 2.22
LRRK1-208ENST00000532029 RTCBQ9Y3I0 505 aaKnown RBP28.9■■■□□ 2.22
LRRK1-208ENST00000532029 KRT24Q2M2I5 525 aa28.88■■■□□ 2.21
LRRK1-208ENST00000532029 INTS5Q6P9B9 1019 aaKnown RBP28.88■■■□□ 2.21
LRRK1-208ENST00000532029 FLAD1Q8NFF5 587 aa28.88■■■□□ 2.21
LRRK1-208ENST00000532029 RPS6KA4O75676 772 aa28.87■■■□□ 2.21
LRRK1-208ENST00000532029 PHF14O94880 888 aa28.87■■■□□ 2.21
LRRK1-208ENST00000532029 FANCIQ9NVI1 1328 aa28.87■■■□□ 2.21
LRRK1-208ENST00000532029 LAMB4A4D0S4 1761 aa28.86■■■□□ 2.21
LRRK1-208ENST00000532029 SSFA2P28290 1259 aa28.86■■■□□ 2.21
LRRK1-208ENST00000532029 SPINK5Q9NQ38 1064 aaPredicted RBP28.86■■■□□ 2.21
LRRK1-208ENST00000532029 ZBTB1Q9Y2K1 713 aa28.86■■■□□ 2.21
LRRK1-208ENST00000532029 PNPLA7Q6ZV29 1317 aa28.86■■■□□ 2.21
LRRK1-208ENST00000532029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.85■■■□□ 2.21
LRRK1-208ENST00000532029 E9PSI1 815 aa28.85■■■□□ 2.21
LRRK1-208ENST00000532029 MSH5O43196 834 aa28.85■■■□□ 2.21
LRRK1-208ENST00000532029 A1BGP04217 495 aa28.85■■■□□ 2.21
LRRK1-208ENST00000532029 CANXP27824 592 aaKnown RBP28.85■■■□□ 2.21
LRRK1-208ENST00000532029 QSER1Q2KHR3 1735 aa28.85■■■□□ 2.21
LRRK1-208ENST00000532029 HOXB7P09629 217 aa28.84■■■□□ 2.21
LRRK1-208ENST00000532029 DUSP27Q5VZP5 1158 aa28.84■■■□□ 2.21
LRRK1-208ENST00000532029 TUBGCP6Q96RT7 1819 aa28.84■■■□□ 2.21
LRRK1-208ENST00000532029 UBR3Q6ZT12 1888 aa28.83■■■□□ 2.21
LRRK1-208ENST00000532029 EIF2S2P20042 333 aaKnown RBP28.83■■■□□ 2.21
LRRK1-208ENST00000532029 TRAPPC3LQ5T215 181 aa28.83■■■□□ 2.21
LRRK1-208ENST00000532029 MYH14Q7Z406 1995 aaKnown RBP28.82■■■□□ 2.2
LRRK1-208ENST00000532029 ELL2O00472 640 aaPredicted RBP28.82■■■□□ 2.2
LRRK1-208ENST00000532029 ADRA2BP18089 450 aa28.82■■■□□ 2.2
LRRK1-208ENST00000532029 SMIM5Q71RC9 77 aa28.82■■■□□ 2.2
LRRK1-208ENST00000532029 COL23A1Q86Y22 540 aaPredicted RBP28.82■■■□□ 2.2
LRRK1-208ENST00000532029 SOS1Q07889 1333 aaPredicted RBP28.81■■■□□ 2.2
LRRK1-208ENST00000532029 NPM2Q86SE8 214 aaKnown RBP28.81■■■□□ 2.2
LRRK1-208ENST00000532029 AMIGO3Q86WK7 504 aa28.81■■■□□ 2.2
LRRK1-208ENST00000532029 C8orf58Q8NAV2 365 aa28.81■■■□□ 2.2
LRRK1-208ENST00000532029 SLFN5Q08AF3 891 aa28.8■■■□□ 2.2
LRRK1-208ENST00000532029 ZNF330Q9Y3S2 320 aaPredicted RBP28.8■■■□□ 2.2
LRRK1-208ENST00000532029 ERBB4Q15303 1308 aa28.79■■■□□ 2.2
LRRK1-208ENST00000532029 IL6STP40189 918 aaPredicted RBP28.79■■■□□ 2.2
LRRK1-208ENST00000532029 HDGFL1Q5TGJ6 251 aa28.79■■■□□ 2.2
LRRK1-208ENST00000532029 NECTIN2Q92692 538 aa28.79■■■□□ 2.2
LRRK1-208ENST00000532029 ZBED9Q6R2W3 1325 aa28.78■■■□□ 2.2
LRRK1-208ENST00000532029 PIP4K2AP48426 406 aaPredicted RBP28.78■■■□□ 2.2
LRRK1-208ENST00000532029 EXOSC9Q06265 439 aaKnown RBP28.78■■■□□ 2.2
LRRK1-208ENST00000532029 CDCA7LQ96GN5 454 aa28.78■■■□□ 2.2
LRRK1-208ENST00000532029 CHMP4AQ9BY43 222 aa28.78■■■□□ 2.2
LRRK1-208ENST00000532029 PDGFDQ9GZP0 370 aaPredicted RBP28.78■■■□□ 2.2
LRRK1-208ENST00000532029 COL15A1P39059 1388 aa28.77■■■□□ 2.2
LRRK1-208ENST00000532029 A0A087WZG4 1122 aa28.77■■■□□ 2.2
LRRK1-208ENST00000532029 RFC4P35249 363 aa28.77■■■□□ 2.2
LRRK1-208ENST00000532029 TWISTNBQ3B726 338 aaPredicted RBP28.77■■■□□ 2.2
LRRK1-208ENST00000532029 ARHGEF1Q92888 912 aaKnown RBP28.77■■■□□ 2.2
LRRK1-208ENST00000532029 CASZ1Q86V15 1759 aa28.76■■■□□ 2.19
LRRK1-208ENST00000532029 NBPF26B4DH59 902 aa28.76■■■□□ 2.19
LRRK1-208ENST00000532029 EIF5P55010 431 aaKnown RBP28.76■■■□□ 2.19
LRRK1-208ENST00000532029 NBPF10Q6P3W6 841 aaKnown RBP28.76■■■□□ 2.19
LRRK1-208ENST00000532029 NBPF15Q8N660 670 aa28.76■■■□□ 2.19
LRRK1-208ENST00000532029 TSPYL6Q8N831 410 aa28.76■■■□□ 2.19
LRRK1-208ENST00000532029 SLC16A10Q8TF71 515 aa28.76■■■□□ 2.19
LRRK1-208ENST00000532029 MYL6BP14649 208 aa28.73■■■□□ 2.19
LRRK1-208ENST00000532029 ARXQ96QS3 562 aa28.73■■■□□ 2.19
LRRK1-208ENST00000532029 SRCAPQ6ZRS2 3230 aa28.72■■■□□ 2.19
LRRK1-208ENST00000532029 ZBTB7AO95365 584 aa28.72■■■□□ 2.19
LRRK1-208ENST00000532029 CCDC30Q5VVM6 783 aa28.72■■■□□ 2.19
LRRK1-208ENST00000532029 ZPR1O75312 459 aa28.71■■■□□ 2.19
LRRK1-208ENST00000532029 DDX21Q9NR30 783 aaKnown RBP eCLIP28.71■■■□□ 2.19
LRRK1-208ENST00000532029 CHPF2Q9P2E5 772 aa28.71■■■□□ 2.19
LRRK1-208ENST00000532029 TRMT2AQ8IZ69 625 aaKnown RBP28.7■■■□□ 2.18
LRRK1-208ENST00000532029 MTFR1LQ9H019 292 aa28.7■■■□□ 2.18
LRRK1-208ENST00000532029 DBF4Q9UBU7 674 aaPredicted RBP28.7■■■□□ 2.18
LRRK1-208ENST00000532029 C4AP0C0L4 1744 aa28.69■■■□□ 2.18
LRRK1-208ENST00000532029 PDIA6Q15084 440 aa28.69■■■□□ 2.18
LRRK1-208ENST00000532029 DZIP3Q86Y13 1208 aaKnown RBP28.69■■■□□ 2.18
LRRK1-208ENST00000532029 NARFQ9UHQ1 456 aa28.69■■■□□ 2.18
LRRK1-208ENST00000532029 USP42Q9H9J4 1324 aaKnown RBP28.69■■■□□ 2.18
LRRK1-208ENST00000532029 VAMP4O75379 141 aa28.68■■■□□ 2.18
LRRK1-208ENST00000532029 ANXA1P04083 346 aa28.68■■■□□ 2.18
LRRK1-208ENST00000532029 SRP68Q9UHB9 627 aaKnown RBP28.68■■■□□ 2.18
LRRK1-208ENST00000532029 TBC1D2BQ9UPU7 963 aa28.68■■■□□ 2.18
LRRK1-208ENST00000532029 PROSER3Q2NL68 480 aa28.67■■■□□ 2.18
LRRK1-208ENST00000532029 STK31Q9BXU1 1019 aa28.67■■■□□ 2.18
LRRK1-208ENST00000532029 ATF5Q9Y2D1 282 aaPredicted RBP28.67■■■□□ 2.18
LRRK1-208ENST00000532029 USPL1Q5W0Q7 1092 aa28.66■■■□□ 2.18
LRRK1-208ENST00000532029 MSL1Q68DK7 614 aa28.66■■■□□ 2.18
LRRK1-208ENST00000532029 SPON1Q9HCB6 807 aa28.66■■■□□ 2.18
LRRK1-208ENST00000532029 KIF6Q6ZMV9 814 aa28.65■■■□□ 2.18
LRRK1-208ENST00000532029 YTHDC1Q96MU7 727 aaKnown RBP28.65■■■□□ 2.18
LRRK1-208ENST00000532029 HYPKQ9NX55 129 aa28.65■■■□□ 2.18
LRRK1-208ENST00000532029 GYS1P13807 737 aa28.64■■■□□ 2.18
LRRK1-208ENST00000532029 NLGN1Q8N2Q7 840 aa28.64■■■□□ 2.18
LRRK1-208ENST00000532029 TCERG1O14776 1098 aaKnown RBP28.63■■■□□ 2.17
LRRK1-208ENST00000532029 AIMP1Q12904 312 aaKnown RBP28.62■■■□□ 2.17
LRRK1-208ENST00000532029 LRP10Q7Z4F1 713 aa28.62■■■□□ 2.17
LRRK1-208ENST00000532029 CAMTA2O94983 1202 aa28.61■■■□□ 2.17
LRRK1-208ENST00000532029 POLD1P28340 1107 aa28.61■■■□□ 2.17
LRRK1-208ENST00000532029 TTLL7Q6ZT98 887 aa28.61■■■□□ 2.17
LRRK1-208ENST00000532029 COPS6Q7L5N1 327 aa28.61■■■□□ 2.17
LRRK1-208ENST00000532029 XAGE3Q8WTP9 111 aa28.61■■■□□ 2.17
LRRK1-208ENST00000532029 LRP5O75197 1615 aa28.61■■■□□ 2.17
LRRK1-208ENST00000532029 SCN7AQ01118 1682 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms