RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 YTHDC1Q96MU7 727 aaKnown RBP19.21■□□□□ 0.67
SRPRA-204ENST00000530680 TEX13AQ9BXU3 409 aaPredicted RBP19.21■□□□□ 0.67
SRPRA-204ENST00000530680 STARD3NLO95772 234 aa19.2■□□□□ 0.66
SRPRA-204ENST00000530680 TSR2Q969E8 191 aaKnown RBP19.2■□□□□ 0.66
SRPRA-204ENST00000530680 LRRC4BQ9NT99 713 aa19.2■□□□□ 0.66
SRPRA-204ENST00000530680 EIF4A1P60842 406 aaKnown RBP19.19■□□□□ 0.66
SRPRA-204ENST00000530680 ITPK1Q13572 414 aa19.19■□□□□ 0.66
SRPRA-204ENST00000530680 DNAJC10Q8IXB1 793 aa19.19■□□□□ 0.66
SRPRA-204ENST00000530680 TUBGCP6Q96RT7 1819 aa19.18■□□□□ 0.66
SRPRA-204ENST00000530680 E9PSI1 815 aa19.18■□□□□ 0.66
SRPRA-204ENST00000530680 C1QTNF8P60827 252 aa19.18■□□□□ 0.66
SRPRA-204ENST00000530680 ZNF827Q17R98 1081 aa19.18■□□□□ 0.66
SRPRA-204ENST00000530680 NPM2Q86SE8 214 aaKnown RBP19.18■□□□□ 0.66
SRPRA-204ENST00000530680 LINC00116Q8NCU8 138 aa19.18■□□□□ 0.66
SRPRA-204ENST00000530680 ZBED9Q6R2W3 1325 aa19.18■□□□□ 0.66
SRPRA-204ENST00000530680 FANCIQ9NVI1 1328 aa19.18■□□□□ 0.66
SRPRA-204ENST00000530680 COL24A1Q17RW2 1714 aa19.17■□□□□ 0.66
SRPRA-204ENST00000530680 ZNF853P0CG23 659 aa19.17■□□□□ 0.66
SRPRA-204ENST00000530680 SLC4A9Q96Q91 983 aa19.17■□□□□ 0.66
SRPRA-204ENST00000530680 TFCP2L1Q9NZI6 479 aa19.17■□□□□ 0.66
SRPRA-204ENST00000530680 ZNF521Q96K83 1311 aa19.17■□□□□ 0.66
SRPRA-204ENST00000530680 UBR3Q6ZT12 1888 aa19.16■□□□□ 0.66
SRPRA-204ENST00000530680 GNPATO15228 680 aa19.16■□□□□ 0.66
SRPRA-204ENST00000530680 CRKLP46109 303 aaKnown RBP19.15■□□□□ 0.66
SRPRA-204ENST00000530680 GPR162Q16538 588 aa19.15■□□□□ 0.66
SRPRA-204ENST00000530680 ZNF330Q9Y3S2 320 aaPredicted RBP19.15■□□□□ 0.66
SRPRA-204ENST00000530680 CNTNAP4Q9C0A0 1308 aa19.15■□□□□ 0.66
SRPRA-204ENST00000530680 MYH14Q7Z406 1995 aaKnown RBP19.14■□□□□ 0.65
SRPRA-204ENST00000530680 GIGYF1O75420 1035 aaPredicted RBP19.14■□□□□ 0.65
SRPRA-204ENST00000530680 CCDC87Q9NVE4 849 aa19.14■□□□□ 0.65
SRPRA-204ENST00000530680 GOLGB1Q14789 3259 aaKnown RBP19.13■□□□□ 0.65
SRPRA-204ENST00000530680 MSH5O43196 834 aa19.13■□□□□ 0.65
SRPRA-204ENST00000530680 PHF14O94880 888 aa19.13■□□□□ 0.65
SRPRA-204ENST00000530680 EIF2S2P20042 333 aaKnown RBP19.13■□□□□ 0.65
SRPRA-204ENST00000530680 POLD1P28340 1107 aa19.13■□□□□ 0.65
SRPRA-204ENST00000530680 DUSP27Q5VZP5 1158 aa19.13■□□□□ 0.65
SRPRA-204ENST00000530680 KLHL34Q8N239 644 aa19.13■□□□□ 0.65
SRPRA-204ENST00000530680 SLC16A10Q8TF71 515 aa19.13■□□□□ 0.65
SRPRA-204ENST00000530680 AKT1S1Q96B36 256 aa19.13■□□□□ 0.65
SRPRA-204ENST00000530680 CHMP4AQ9BY43 222 aa19.13■□□□□ 0.65
SRPRA-204ENST00000530680 RTCBQ9Y3I0 505 aaKnown RBP19.13■□□□□ 0.65
SRPRA-204ENST00000530680 PRAMEF22A3QJZ6 481 aa19.12■□□□□ 0.65
SRPRA-204ENST00000530680 ELL2O00472 640 aaPredicted RBP19.12■□□□□ 0.65
SRPRA-204ENST00000530680 HOXB7P09629 217 aa19.12■□□□□ 0.65
SRPRA-204ENST00000530680 CYP19A1P11511 503 aaPredicted RBP19.12■□□□□ 0.65
SRPRA-204ENST00000530680 CANXP27824 592 aaKnown RBP19.12■□□□□ 0.65
SRPRA-204ENST00000530680 KRT24Q2M2I5 525 aa19.12■□□□□ 0.65
SRPRA-204ENST00000530680 HDGFL1Q5TGJ6 251 aa19.12■□□□□ 0.65
SRPRA-204ENST00000530680 SOS1Q07889 1333 aaPredicted RBP19.11■□□□□ 0.65
SRPRA-204ENST00000530680 RC3H1Q5TC82 1133 aaKnown RBP19.11■□□□□ 0.65
SRPRA-204ENST00000530680 NECTIN2Q92692 538 aa19.11■□□□□ 0.65
SRPRA-204ENST00000530680 SPINK5Q9NQ38 1064 aaPredicted RBP19.11■□□□□ 0.65
SRPRA-204ENST00000530680 C4AP0C0L4 1744 aa19.11■□□□□ 0.65
SRPRA-204ENST00000530680 PNPLA7Q6ZV29 1317 aa19.1■□□□□ 0.65
SRPRA-204ENST00000530680 EXOSC9Q06265 439 aaKnown RBP19.1■□□□□ 0.65
SRPRA-204ENST00000530680 SLFN5Q08AF3 891 aa19.1■□□□□ 0.65
SRPRA-204ENST00000530680 TWISTNBQ3B726 338 aaPredicted RBP19.1■□□□□ 0.65
SRPRA-204ENST00000530680 FLAD1Q8NFF5 587 aa19.1■□□□□ 0.65
SRPRA-204ENST00000530680 CDCA7LQ96GN5 454 aa19.1■□□□□ 0.65
SRPRA-204ENST00000530680 ZBTB1Q9Y2K1 713 aa19.1■□□□□ 0.65
SRPRA-204ENST00000530680 USP16Q9Y5T5 823 aa19.1■□□□□ 0.65
SRPRA-204ENST00000530680 PELP1Q8IZL8 1130 aaKnown RBP19.09■□□□□ 0.65
SRPRA-204ENST00000530680 ERBB4Q15303 1308 aa19.08■□□□□ 0.65
SRPRA-204ENST00000530680 A1BGP04217 495 aa19.08■□□□□ 0.64
SRPRA-204ENST00000530680 SSFA2P28290 1259 aa19.08■□□□□ 0.64
SRPRA-204ENST00000530680 C8orf58Q8NAV2 365 aa19.08■□□□□ 0.64
SRPRA-204ENST00000530680 STK31Q9BXU1 1019 aa19.08■□□□□ 0.64
SRPRA-204ENST00000530680 COL15A1P39059 1388 aa19.07■□□□□ 0.64
SRPRA-204ENST00000530680 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.07■□□□□ 0.64
SRPRA-204ENST00000530680 RPS6KA4O75676 772 aa19.07■□□□□ 0.64
SRPRA-204ENST00000530680 MYL6BP14649 208 aa19.07■□□□□ 0.64
SRPRA-204ENST00000530680 TRAPPC3LQ5T215 181 aa19.07■□□□□ 0.64
SRPRA-204ENST00000530680 CCDC30Q5VVM6 783 aa19.07■□□□□ 0.64
SRPRA-204ENST00000530680 INTS5Q6P9B9 1019 aaKnown RBP19.07■□□□□ 0.64
SRPRA-204ENST00000530680 CACNA1FO60840 1977 aa19.06■□□□□ 0.64
SRPRA-204ENST00000530680 A0A087WZG4 1122 aa19.06■□□□□ 0.64
SRPRA-204ENST00000530680 ADRA2BP18089 450 aa19.06■□□□□ 0.64
SRPRA-204ENST00000530680 RFC4P35249 363 aa19.06■□□□□ 0.64
SRPRA-204ENST00000530680 PIP4K2AP48426 406 aaPredicted RBP19.06■□□□□ 0.64
SRPRA-204ENST00000530680 IL6STP40189 918 aaPredicted RBP19.05■□□□□ 0.64
SRPRA-204ENST00000530680 TSPYL6Q8N831 410 aa19.05■□□□□ 0.64
SRPRA-204ENST00000530680 KIF6Q6ZMV9 814 aa19.04■□□□□ 0.64
SRPRA-204ENST00000530680 NLGN2Q8NFZ4 835 aa19.04■□□□□ 0.64
SRPRA-204ENST00000530680 CHPF2Q9P2E5 772 aa19.04■□□□□ 0.64
SRPRA-204ENST00000530680 DBF4Q9UBU7 674 aaPredicted RBP19.04■□□□□ 0.64
SRPRA-204ENST00000530680 SCN7AQ01118 1682 aa19.04■□□□□ 0.64
SRPRA-204ENST00000530680 ZPR1O75312 459 aa19.03■□□□□ 0.64
SRPRA-204ENST00000530680 BCORQ6W2J9 1755 aa19.03■□□□□ 0.64
SRPRA-204ENST00000530680 DDX21Q9NR30 783 aaKnown RBP eCLIP19.01■□□□□ 0.63
SRPRA-204ENST00000530680 HYPKQ9NX55 129 aa19.01■□□□□ 0.63
SRPRA-204ENST00000530680 NBPF26B4DH59 902 aa19■□□□□ 0.63
SRPRA-204ENST00000530680 TCERG1O14776 1098 aaKnown RBP19■□□□□ 0.63
SRPRA-204ENST00000530680 GRIN3BO60391 1043 aa19■□□□□ 0.63
SRPRA-204ENST00000530680 ANXA1P04083 346 aa19■□□□□ 0.63
SRPRA-204ENST00000530680 CT47B1P0C2W7 299 aaPredicted RBP19■□□□□ 0.63
SRPRA-204ENST00000530680 NBPF10Q6P3W6 841 aaKnown RBP19■□□□□ 0.63
SRPRA-204ENST00000530680 SMIM5Q71RC9 77 aa19■□□□□ 0.63
SRPRA-204ENST00000530680 DZIP3Q86Y13 1208 aaKnown RBP19■□□□□ 0.63
SRPRA-204ENST00000530680 COL23A1Q86Y22 540 aaPredicted RBP19■□□□□ 0.63
SRPRA-204ENST00000530680 NBPF15Q8N660 670 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms