RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 YBX3P16989 372 aaKnown RBP eCLIP20.5■□□□□ 0.87
CCDC90B-215ENST00000529745 NFE2L2Q16236 605 aa20.5■□□□□ 0.87
CCDC90B-215ENST00000529745 NLGN1Q8N2Q7 840 aa20.5■□□□□ 0.87
CCDC90B-215ENST00000529745 ZNF496Q96IT1 587 aaPredicted RBP20.5■□□□□ 0.87
CCDC90B-215ENST00000529745 TEX13AQ9BXU3 409 aaPredicted RBP20.5■□□□□ 0.87
CCDC90B-215ENST00000529745 CD2APQ9Y5K6 639 aa20.5■□□□□ 0.87
CCDC90B-215ENST00000529745 SOS1Q07889 1333 aaPredicted RBP20.5■□□□□ 0.87
CCDC90B-215ENST00000529745 LAMB4A4D0S4 1761 aa20.49■□□□□ 0.87
CCDC90B-215ENST00000529745 BTBD11A6QL63 1104 aa20.49■□□□□ 0.87
CCDC90B-215ENST00000529745 GYS1P13807 737 aa20.49■□□□□ 0.87
CCDC90B-215ENST00000529745 MCM10Q7L590 875 aa20.49■□□□□ 0.87
CCDC90B-215ENST00000529745 GPBP1L1Q9HC44 474 aaPredicted RBP20.49■□□□□ 0.87
CCDC90B-215ENST00000529745 KIAA1551Q9HCM1 1747 aa20.49■□□□□ 0.87
CCDC90B-215ENST00000529745 RFC4P35249 363 aa20.48■□□□□ 0.87
CCDC90B-215ENST00000529745 FMNL2Q96PY5 1086 aa20.48■□□□□ 0.87
CCDC90B-215ENST00000529745 USP42Q9H9J4 1324 aaKnown RBP20.48■□□□□ 0.87
CCDC90B-215ENST00000529745 MAPK8IP3Q9UPT6 1336 aa20.47■□□□□ 0.87
CCDC90B-215ENST00000529745 SCN7AQ01118 1682 aa20.46■□□□□ 0.87
CCDC90B-215ENST00000529745 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
CCDC90B-215ENST00000529745 STARD3NLO95772 234 aa20.46■□□□□ 0.87
CCDC90B-215ENST00000529745 ZBTB1Q9Y2K1 713 aa20.46■□□□□ 0.87
CCDC90B-215ENST00000529745 COL15A1P39059 1388 aa20.46■□□□□ 0.87
CCDC90B-215ENST00000529745 NRXN2Q9P2S2 1712 aa20.45■□□□□ 0.86
CCDC90B-215ENST00000529745 DCTN1Q14203 1278 aa20.45■□□□□ 0.86
CCDC90B-215ENST00000529745 TAF7Q15545 349 aaPredicted RBP20.45■□□□□ 0.86
CCDC90B-215ENST00000529745 BCORQ6W2J9 1755 aa20.44■□□□□ 0.86
CCDC90B-215ENST00000529745 KCNQ3O43525 872 aa20.43■□□□□ 0.86
CCDC90B-215ENST00000529745 MMP10P09238 476 aa20.43■□□□□ 0.86
CCDC90B-215ENST00000529745 AFDNP55196 1824 aaKnown RBP20.43■□□□□ 0.86
CCDC90B-215ENST00000529745 BRCA1P38398 1863 aaKnown RBP20.43■□□□□ 0.86
CCDC90B-215ENST00000529745 C10orf71Q711Q0 1435 aa20.43■□□□□ 0.86
CCDC90B-215ENST00000529745 EIF5P55010 431 aaKnown RBP20.42■□□□□ 0.86
CCDC90B-215ENST00000529745 PNISRQ8TF01 805 aaKnown RBP20.42■□□□□ 0.86
CCDC90B-215ENST00000529745 NARFQ9UHQ1 456 aa20.42■□□□□ 0.86
CCDC90B-215ENST00000529745 ADCY9O60503 1353 aa20.42■□□□□ 0.86
CCDC90B-215ENST00000529745 IL6STP40189 918 aaPredicted RBP20.4■□□□□ 0.86
CCDC90B-215ENST00000529745 TMPOP42166 694 aaKnown RBP20.4■□□□□ 0.86
CCDC90B-215ENST00000529745 WDR43Q15061 677 aaKnown RBP eCLIP20.4■□□□□ 0.86
CCDC90B-215ENST00000529745 SRP68Q9UHB9 627 aaKnown RBP20.4■□□□□ 0.86
CCDC90B-215ENST00000529745 N4BP2Q86UW6 1770 aaPredicted RBP20.39■□□□□ 0.86
CCDC90B-215ENST00000529745 SNRPA1P09661 255 aaKnown RBP20.39■□□□□ 0.85
CCDC90B-215ENST00000529745 TM4SF1P30408 202 aa20.39■□□□□ 0.85
CCDC90B-215ENST00000529745 FKBP8Q14318 412 aa20.39■□□□□ 0.85
CCDC90B-215ENST00000529745 ZNF526Q8TF50 670 aaPredicted RBP20.39■□□□□ 0.85
CCDC90B-215ENST00000529745 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
CCDC90B-215ENST00000529745 A0A087WZG4 1122 aa20.38■□□□□ 0.85
CCDC90B-215ENST00000529745 ZPR1O75312 459 aa20.38■□□□□ 0.85
CCDC90B-215ENST00000529745 LMOD3Q0VAK6 560 aa20.38■□□□□ 0.85
CCDC90B-215ENST00000529745 BABAM1Q9NWV8 329 aa20.38■□□□□ 0.85
CCDC90B-215ENST00000529745 CANXP27824 592 aaKnown RBP20.37■□□□□ 0.85
CCDC90B-215ENST00000529745 RIPK4P57078 832 aa20.37■□□□□ 0.85
CCDC90B-215ENST00000529745 USPL1Q5W0Q7 1092 aa20.37■□□□□ 0.85
CCDC90B-215ENST00000529745 DNAJC5GQ8N7S2 189 aa20.37■□□□□ 0.85
CCDC90B-215ENST00000529745 ADAMTS8Q9UP79 889 aa20.37■□□□□ 0.85
CCDC90B-215ENST00000529745 USP16Q9Y5T5 823 aa20.37■□□□□ 0.85
CCDC90B-215ENST00000529745 PARP3Q9Y6F1 533 aa20.37■□□□□ 0.85
CCDC90B-215ENST00000529745 PXDNLA1KZ92 1463 aa20.37■□□□□ 0.85
CCDC90B-215ENST00000529745 APLP1P51693 650 aa20.36■□□□□ 0.85
CCDC90B-215ENST00000529745 TGFB2P61812 414 aa20.36■□□□□ 0.85
CCDC90B-215ENST00000529745 BCL2L12Q9HB09 334 aa20.36■□□□□ 0.85
CCDC90B-215ENST00000529745 A1BGP04217 495 aa20.35■□□□□ 0.85
CCDC90B-215ENST00000529745 DDR1Q08345 913 aa20.35■□□□□ 0.85
CCDC90B-215ENST00000529745 ARFGEF1Q9Y6D6 1849 aa20.34■□□□□ 0.85
CCDC90B-215ENST00000529745 DLEC1Q9Y238 1755 aa20.34■□□□□ 0.85
CCDC90B-215ENST00000529745 POLRMTO00411 1230 aaKnown RBP20.34■□□□□ 0.85
CCDC90B-215ENST00000529745 EIF4A1P60842 406 aaKnown RBP20.34■□□□□ 0.85
CCDC90B-215ENST00000529745 THUMPD2Q9BTF0 503 aaKnown RBP20.34■□□□□ 0.85
CCDC90B-215ENST00000529745 PRAMEF22A3QJZ6 481 aa20.33■□□□□ 0.85
CCDC90B-215ENST00000529745 KIF3CO14782 793 aa20.33■□□□□ 0.85
CCDC90B-215ENST00000529745 CAPN15O75808 1086 aa20.33■□□□□ 0.85
CCDC90B-215ENST00000529745 COL13A1Q5TAT6 717 aaPredicted RBP20.33■□□□□ 0.85
CCDC90B-215ENST00000529745 RGL2O15211 777 aa20.32■□□□□ 0.84
CCDC90B-215ENST00000529745 CCDC146Q8IYE0 955 aa20.32■□□□□ 0.84
CCDC90B-215ENST00000529745 MIS18AQ9NYP9 233 aa20.32■□□□□ 0.84
CCDC90B-215ENST00000529745 NFIXQ14938 502 aa20.31■□□□□ 0.84
CCDC90B-215ENST00000529745 TRIM35Q9UPQ4 493 aa20.31■□□□□ 0.84
CCDC90B-215ENST00000529745 PCNTO95613 3336 aa20.3■□□□□ 0.84
CCDC90B-215ENST00000529745 ANKRD31Q8N7Z5 1873 aa20.3■□□□□ 0.84
CCDC90B-215ENST00000529745 NBPF26B4DH59 902 aa20.29■□□□□ 0.84
CCDC90B-215ENST00000529745 CAMTA2O94983 1202 aa20.29■□□□□ 0.84
CCDC90B-215ENST00000529745 NBPF10Q6P3W6 841 aaKnown RBP20.29■□□□□ 0.84
CCDC90B-215ENST00000529745 NBPF15Q8N660 670 aa20.29■□□□□ 0.84
CCDC90B-215ENST00000529745 NUP98P52948 1817 aa20.28■□□□□ 0.84
CCDC90B-215ENST00000529745 PRELPP51888 382 aa20.28■□□□□ 0.84
CCDC90B-215ENST00000529745 TSPYL4Q9UJ04 414 aa20.28■□□□□ 0.84
CCDC90B-215ENST00000529745 ERBB4Q15303 1308 aa20.27■□□□□ 0.84
CCDC90B-215ENST00000529745 CLEC4GQ6UXB4 293 aa20.27■□□□□ 0.84
CCDC90B-215ENST00000529745 NPM2Q86SE8 214 aaKnown RBP20.27■□□□□ 0.84
CCDC90B-215ENST00000529745 DZIP3Q86Y13 1208 aaKnown RBP20.27■□□□□ 0.84
CCDC90B-215ENST00000529745 TBC1D2BQ9UPU7 963 aa20.27■□□□□ 0.84
CCDC90B-215ENST00000529745 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.84
CCDC90B-215ENST00000529745 CHL1O00533 1208 aa20.26■□□□□ 0.83
CCDC90B-215ENST00000529745 ANP32CO43423 234 aa20.26■□□□□ 0.83
CCDC90B-215ENST00000529745 CCDC184Q52MB2 194 aa20.26■□□□□ 0.83
CCDC90B-215ENST00000529745 WDR90Q96KV7 1748 aa20.25■□□□□ 0.83
CCDC90B-215ENST00000529745 CARMIL3Q8ND23 1372 aa20.25■□□□□ 0.83
CCDC90B-215ENST00000529745 SERPINB2P05120 415 aa20.25■□□□□ 0.83
CCDC90B-215ENST00000529745 KCNA3P22001 575 aa20.25■□□□□ 0.83
CCDC90B-215ENST00000529745 TBC1D9BQ66K14 1250 aa20.25■□□□□ 0.83
CCDC90B-215ENST00000529745 DPEP1P16444 411 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms