RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 CEP85Q6P2H3 762 aa18.22■□□□□ 0.51
USP35-203ENST00000529308 RAI14Q9P0K7 980 aa18.22■□□□□ 0.51
USP35-203ENST00000529308 TRMT112Q9UI30 125 aaKnown RBP18.22■□□□□ 0.51
USP35-203ENST00000529308 LRRC2Q9BYS8 371 aa18.22■□□□□ 0.51
USP35-203ENST00000529308 GCP02774 474 aa18.22■□□□□ 0.51
USP35-203ENST00000529308 IL13P35225 146 aa18.22■□□□□ 0.51
USP35-203ENST00000529308 BRPF1P55201 1214 aaPredicted RBP18.22■□□□□ 0.51
USP35-203ENST00000529308 ORAI2Q96SN7 254 aa18.22■□□□□ 0.51
USP35-203ENST00000529308 CCDC39Q9UFE4 941 aa18.22■□□□□ 0.51
USP35-203ENST00000529308 NECAB1Q8N987 351 aa18.21■□□□□ 0.51
USP35-203ENST00000529308 BAG4O95429 457 aaKnown RBP18.21■□□□□ 0.51
USP35-203ENST00000529308 CCDC173Q0VFZ6 552 aa18.21■□□□□ 0.51
USP35-203ENST00000529308 TTLL5Q6EMB2 1281 aa18.21■□□□□ 0.51
USP35-203ENST00000529308 CCDC192P0DO97 292 aa18.21■□□□□ 0.51
USP35-203ENST00000529308 ATP2B2Q01814 1243 aa18.21■□□□□ 0.51
USP35-203ENST00000529308 IFIT5Q13325 482 aaKnown RBP18.2■□□□□ 0.5
USP35-203ENST00000529308 FILIP1Q7Z7B0 1213 aa18.2■□□□□ 0.5
USP35-203ENST00000529308 PTPRTO14522 1441 aa18.2■□□□□ 0.5
USP35-203ENST00000529308 TPM1P09493 284 aa18.2■□□□□ 0.5
USP35-203ENST00000529308 DCTPP1Q9H773 170 aa18.2■□□□□ 0.5
USP35-203ENST00000529308 LIMCH1Q9UPQ0 1083 aa18.2■□□□□ 0.5
USP35-203ENST00000529308 PIK3R4Q99570 1358 aa18.19■□□□□ 0.5
USP35-203ENST00000529308 PRKCSHP14314 528 aaPredicted RBP18.19■□□□□ 0.5
USP35-203ENST00000529308 TMX3Q96JJ7 454 aa18.19■□□□□ 0.5
USP35-203ENST00000529308 PLEKHM2Q8IWE5 1019 aa18.19■□□□□ 0.5
USP35-203ENST00000529308 ZSCAN31Q96LW9 406 aaPredicted RBP18.19■□□□□ 0.5
USP35-203ENST00000529308 PUS7Q96PZ0 661 aaKnown RBP18.19■□□□□ 0.5
USP35-203ENST00000529308 RNF123Q5XPI4 1314 aa18.19■□□□□ 0.5
USP35-203ENST00000529308 MINDY4BA8MYZ0 360 aa18.19■□□□□ 0.5
USP35-203ENST00000529308 AIDAQ96BJ3 306 aa18.19■□□□□ 0.5
USP35-203ENST00000529308 HOOK1Q9UJC3 728 aaKnown RBP18.19■□□□□ 0.5
USP35-203ENST00000529308 PBRM1Q86U86 1689 aa18.19■□□□□ 0.5
USP35-203ENST00000529308 LDHAL6AQ6ZMR3 332 aa18.19■□□□□ 0.5
USP35-203ENST00000529308 CKAP2LQ8IYA6 745 aa18.19■□□□□ 0.5
USP35-203ENST00000529308 NOC3LQ8WTT2 800 aaKnown RBP18.19■□□□□ 0.5
USP35-203ENST00000529308 PANK2Q9BZ23 570 aa18.19■□□□□ 0.5
USP35-203ENST00000529308 TTC21AQ8NDW8 1320 aa18.18■□□□□ 0.5
USP35-203ENST00000529308 LGR6Q9HBX8 967 aa18.18■□□□□ 0.5
USP35-203ENST00000529308 MAGI2Q86UL8 1455 aa18.18■□□□□ 0.5
USP35-203ENST00000529308 NACAP1Q9BZK3 213 aa18.18■□□□□ 0.5
USP35-203ENST00000529308 ZNF396Q96N95 335 aaPredicted RBP18.18■□□□□ 0.5
USP35-203ENST00000529308 XBP1P17861 261 aa18.17■□□□□ 0.5
USP35-203ENST00000529308 ATP8B2P98198 1209 aa18.17■□□□□ 0.5
USP35-203ENST00000529308 IKQ13123 557 aaPredicted RBP18.17■□□□□ 0.5
USP35-203ENST00000529308 KRT32Q14532 448 aa18.17■□□□□ 0.5
USP35-203ENST00000529308 LMBR1LQ6UX01 489 aa18.17■□□□□ 0.5
USP35-203ENST00000529308 TARBP1Q13395 1621 aaKnown RBP18.17■□□□□ 0.5
USP35-203ENST00000529308 ABCC1P33527 1531 aa18.17■□□□□ 0.5
USP35-203ENST00000529308 ZGPATQ8N5A5 531 aaKnown RBP18.17■□□□□ 0.5
USP35-203ENST00000529308 DDX17Q92841 729 aaKnown RBP18.17■□□□□ 0.5
USP35-203ENST00000529308 NUP62CLQ9H1M0 184 aa18.17■□□□□ 0.5
USP35-203ENST00000529308 SNRPA1P09661 255 aaKnown RBP18.17■□□□□ 0.5
USP35-203ENST00000529308 HOXC9P31274 260 aa18.17■□□□□ 0.5
USP35-203ENST00000529308 LTKP29376 864 aa18.16■□□□□ 0.5
USP35-203ENST00000529308 NAT10Q9H0A0 1025 aaKnown RBP18.16■□□□□ 0.5
USP35-203ENST00000529308 FLT4P35916 1363 aa18.16■□□□□ 0.5
USP35-203ENST00000529308 CCDC69A6NI79 296 aa18.16■□□□□ 0.5
USP35-203ENST00000529308 OLFM4Q6UX06 510 aa18.16■□□□□ 0.5
USP35-203ENST00000529308 KDM2BQ8NHM5 1336 aa18.16■□□□□ 0.5
USP35-203ENST00000529308 IMMTQ16891 758 aaKnown RBP18.16■□□□□ 0.5
USP35-203ENST00000529308 CADPS2Q86UW7 1296 aa18.16■□□□□ 0.5
USP35-203ENST00000529308 GNL3LQ9NVN8 582 aaKnown RBP18.16■□□□□ 0.5
USP35-203ENST00000529308 U3KPZ7 1027 aaPredicted RBP18.15■□□□□ 0.5
USP35-203ENST00000529308 GRM8O00222 908 aa18.15■□□□□ 0.5
USP35-203ENST00000529308 CPA1P15085 419 aa18.15■□□□□ 0.5
USP35-203ENST00000529308 TRIM22Q8IYM9 498 aa18.15■□□□□ 0.5
USP35-203ENST00000529308 CTNNA3Q9UI47 895 aa18.15■□□□□ 0.5
USP35-203ENST00000529308 IQSEC3Q9UPP2 1182 aaPredicted RBP18.15■□□□□ 0.5
USP35-203ENST00000529308 KLHDC4Q8TBB5 520 aa18.15■□□□□ 0.5
USP35-203ENST00000529308 ANKRD20A12PQ8NF67 263 aa18.15■□□□□ 0.5
USP35-203ENST00000529308 ESYT1Q9BSJ8 1104 aa18.15■□□□□ 0.5
USP35-203ENST00000529308 ATP7AQ04656 1500 aa18.15■□□□□ 0.5
USP35-203ENST00000529308 CCDC144CPQ8IYA2 1237 aa18.14■□□□□ 0.49
USP35-203ENST00000529308 EVI5LQ96CN4 794 aa18.14■□□□□ 0.49
USP35-203ENST00000529308 LETM1O95202 739 aaPredicted RBP18.14■□□□□ 0.49
USP35-203ENST00000529308 IGHMBP2P38935 993 aaKnown RBP18.14■□□□□ 0.49
USP35-203ENST00000529308 UBAC1Q9BSL1 405 aa18.14■□□□□ 0.49
USP35-203ENST00000529308 BRMS1Q9HCU9 246 aa18.14■□□□□ 0.49
USP35-203ENST00000529308 IPO7O95373 1038 aaKnown RBP18.14■□□□□ 0.49
USP35-203ENST00000529308 GJB2P29033 226 aa18.14■□□□□ 0.49
USP35-203ENST00000529308 EXOC5O00471 708 aa18.13■□□□□ 0.49
USP35-203ENST00000529308 FAM177A1Q8N128 213 aaPredicted RBP18.13■□□□□ 0.49
USP35-203ENST00000529308 USP25Q9UHP3 1055 aa18.13■□□□□ 0.49
USP35-203ENST00000529308 KSR2Q6VAB6 950 aa18.13■□□□□ 0.49
USP35-203ENST00000529308 AKAP4Q5JQC9 854 aa18.12■□□□□ 0.49
USP35-203ENST00000529308 UGGT1Q9NYU2 1555 aa18.12■□□□□ 0.49
USP35-203ENST00000529308 NPC1L1Q9UHC9 1359 aa18.12■□□□□ 0.49
USP35-203ENST00000529308 SLC4A8Q2Y0W8 1093 aa18.12■□□□□ 0.49
USP35-203ENST00000529308 CFAP45Q9UL16 551 aa18.12■□□□□ 0.49
USP35-203ENST00000529308 STX6O43752 255 aa18.12■□□□□ 0.49
USP35-203ENST00000529308 CWC25Q9NXE8 425 aaPredicted RBP18.12■□□□□ 0.49
USP35-203ENST00000529308 BRF1Q92994 677 aa18.12■□□□□ 0.49
USP35-203ENST00000529308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.11■□□□□ 0.49
USP35-203ENST00000529308 EIF2AK4Q9P2K8 1649 aaKnown RBP18.11■□□□□ 0.49
USP35-203ENST00000529308 CHL1O00533 1208 aa18.11■□□□□ 0.49
USP35-203ENST00000529308 SERPINC1P01008 464 aa18.11■□□□□ 0.49
USP35-203ENST00000529308 ACSBG1Q96GR2 724 aa18.11■□□□□ 0.49
USP35-203ENST00000529308 YEATS2Q9ULM3 1422 aa18.11■□□□□ 0.49
USP35-203ENST00000529308 ZSCAN25Q6NSZ9 544 aa18.11■□□□□ 0.49
USP35-203ENST00000529308 NAPBQ9H115 298 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms