RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 MYH7P12883 1935 aa10.19□□□□□ -0.78
SORL1-207ENST00000528339 TRIM27P14373 513 aa10.19□□□□□ -0.78
SORL1-207ENST00000528339 RC3H1Q5TC82 1133 aaKnown RBP10.19□□□□□ -0.78
SORL1-207ENST00000528339 LMOD2Q6P5Q4 547 aa10.19□□□□□ -0.78
SORL1-207ENST00000528339 DDB1Q16531 1140 aa10.19□□□□□ -0.78
SORL1-207ENST00000528339 C20orf194Q5TEA3 1177 aa10.19□□□□□ -0.78
SORL1-207ENST00000528339 PALLDQ8WX93 1383 aa10.19□□□□□ -0.78
SORL1-207ENST00000528339 KIF16BQ96L93 1317 aa10.18□□□□□ -0.78
SORL1-207ENST00000528339 AK9Q5TCS8 1911 aa10.18□□□□□ -0.78
SORL1-207ENST00000528339 BTBD11A6QL63 1104 aa10.18□□□□□ -0.78
SORL1-207ENST00000528339 C1orf141Q5JVX7 400 aa10.18□□□□□ -0.78
SORL1-207ENST00000528339 PLSCR1O15162 318 aa10.18□□□□□ -0.78
SORL1-207ENST00000528339 EXOC5O00471 708 aa10.18□□□□□ -0.78
SORL1-207ENST00000528339 PROM2Q8N271 834 aa10.18□□□□□ -0.78
SORL1-207ENST00000528339 STRN4Q9NRL3 753 aa10.18□□□□□ -0.78
SORL1-207ENST00000528339 TAF1P21675 1872 aa10.17□□□□□ -0.78
SORL1-207ENST00000528339 SEPT12Q8IYM1 358 aa10.17□□□□□ -0.78
SORL1-207ENST00000528339 ITPK1Q13572 414 aa10.17□□□□□ -0.78
SORL1-207ENST00000528339 QTRT2Q9H974 415 aaKnown RBP10.17□□□□□ -0.78
SORL1-207ENST00000528339 DDX21Q9NR30 783 aaKnown RBP eCLIP10.17□□□□□ -0.78
SORL1-207ENST00000528339 TNNQ9UQP3 1299 aa10.17□□□□□ -0.78
SORL1-207ENST00000528339 DDX60LQ5H9U9 1706 aaKnown RBP10.17□□□□□ -0.78
SORL1-207ENST00000528339 ZBTB7BO15156 539 aaPredicted RBP10.17□□□□□ -0.78
SORL1-207ENST00000528339 FAM98CQ17RN3 349 aaKnown RBP10.17□□□□□ -0.78
SORL1-207ENST00000528339 ZBTB40Q9NUA8 1239 aa10.17□□□□□ -0.78
SORL1-207ENST00000528339 NGLY1Q96IV0 654 aa10.16□□□□□ -0.78
SORL1-207ENST00000528339 TSPYL4Q9UJ04 414 aa10.16□□□□□ -0.78
SORL1-207ENST00000528339 ASAP1Q9ULH1 1129 aa10.16□□□□□ -0.78
SORL1-207ENST00000528339 DUOX1Q9NRD9 1551 aa10.16□□□□□ -0.78
SORL1-207ENST00000528339 CENPBP07199 599 aaPredicted RBP10.16□□□□□ -0.78
SORL1-207ENST00000528339 PROSER3Q2NL68 480 aa10.16□□□□□ -0.78
SORL1-207ENST00000528339 ATF7IPQ6VMQ6 1270 aa10.16□□□□□ -0.78
SORL1-207ENST00000528339 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
SORL1-207ENST00000528339 MYH13Q9UKX3 1938 aa10.16□□□□□ -0.78
SORL1-207ENST00000528339 CDK5RAP2Q96SN8 1893 aa10.16□□□□□ -0.78
SORL1-207ENST00000528339 EVA1CP58658 441 aa10.16□□□□□ -0.78
SORL1-207ENST00000528339 TRIM28Q13263 835 aaKnown RBP10.16□□□□□ -0.78
SORL1-207ENST00000528339 G2E3Q7L622 706 aa10.16□□□□□ -0.78
SORL1-207ENST00000528339 FER1L6Q2WGJ9 1857 aa10.15□□□□□ -0.78
SORL1-207ENST00000528339 EIF5P55010 431 aaKnown RBP10.15□□□□□ -0.78
SORL1-207ENST00000528339 SNRPA1P09661 255 aaKnown RBP10.15□□□□□ -0.78
SORL1-207ENST00000528339 MTX1Q13505 466 aa10.15□□□□□ -0.78
SORL1-207ENST00000528339 CNGB1Q14028 1251 aaPredicted RBP10.15□□□□□ -0.78
SORL1-207ENST00000528339 BEND3Q5T5X7 828 aa10.15□□□□□ -0.78
SORL1-207ENST00000528339 FMNL2Q96PY5 1086 aa10.15□□□□□ -0.78
SORL1-207ENST00000528339 MIS18AQ9NYP9 233 aa10.15□□□□□ -0.78
SORL1-207ENST00000528339 CACNA1SQ13698 1873 aa10.15□□□□□ -0.78
SORL1-207ENST00000528339 NUTM2BA6NNL0 878 aaPredicted RBP10.15□□□□□ -0.79
SORL1-207ENST00000528339 NUTM2EB1AL46 878 aaPredicted RBP10.15□□□□□ -0.79
SORL1-207ENST00000528339 NUTM2AQ8IVF1 878 aaPredicted RBP10.15□□□□□ -0.79
SORL1-207ENST00000528339 LAMB1P07942 1786 aa10.14□□□□□ -0.79
SORL1-207ENST00000528339 RTL9Q8NET4 1388 aa10.14□□□□□ -0.79
SORL1-207ENST00000528339 RTF1Q92541 710 aaKnown RBP10.14□□□□□ -0.79
SORL1-207ENST00000528339 LAMA4Q16363 1823 aa10.14□□□□□ -0.79
SORL1-207ENST00000528339 KCNQ2O43526 872 aa10.14□□□□□ -0.79
SORL1-207ENST00000528339 AMIGO3Q86WK7 504 aa10.14□□□□□ -0.79
SORL1-207ENST00000528339 DICER1Q9UPY3 1922 aaKnown RBP10.14□□□□□ -0.79
SORL1-207ENST00000528339 MVPQ14764 893 aaKnown RBP10.14□□□□□ -0.79
SORL1-207ENST00000528339 LINC00116Q8NCU8 138 aa10.14□□□□□ -0.79
SORL1-207ENST00000528339 KAZALD1Q96I82 304 aa10.14□□□□□ -0.79
SORL1-207ENST00000528339 USP16Q9Y5T5 823 aa10.14□□□□□ -0.79
SORL1-207ENST00000528339 ISCA1Q9BUE6 129 aa10.13□□□□□ -0.79
SORL1-207ENST00000528339 NOB1Q9ULX3 412 aaKnown RBP10.13□□□□□ -0.79
SORL1-207ENST00000528339 CSB-PGBD3P0DP91 1061 aa10.13□□□□□ -0.79
SORL1-207ENST00000528339 LRRC4BQ9NT99 713 aa10.13□□□□□ -0.79
SORL1-207ENST00000528339 SALL3Q9BXA9 1300 aa10.13□□□□□ -0.79
SORL1-207ENST00000528339 YTHDC1Q96MU7 727 aaKnown RBP10.12□□□□□ -0.79
SORL1-207ENST00000528339 SUPT16HQ9Y5B9 1047 aaKnown RBP10.12□□□□□ -0.79
SORL1-207ENST00000528339 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
SORL1-207ENST00000528339 CCDC30Q5VVM6 783 aa10.12□□□□□ -0.79
SORL1-207ENST00000528339 SIRT2Q8IXJ6 389 aa10.12□□□□□ -0.79
SORL1-207ENST00000528339 CAMKK2Q96RR4 588 aa10.12□□□□□ -0.79
SORL1-207ENST00000528339 IGKV5-2P06315 115 aa10.12□□□□□ -0.79
SORL1-207ENST00000528339 SLC27A3Q5K4L6 730 aa10.12□□□□□ -0.79
SORL1-207ENST00000528339 PLA2G12BQ9BX93 195 aa10.12□□□□□ -0.79
SORL1-207ENST00000528339 TEX13AQ9BXU3 409 aaPredicted RBP10.12□□□□□ -0.79
SORL1-207ENST00000528339 HYPKQ9NX55 129 aa10.12□□□□□ -0.79
SORL1-207ENST00000528339 DBF4Q9UBU7 674 aaPredicted RBP10.12□□□□□ -0.79
SORL1-207ENST00000528339 MYO5AQ9Y4I1 1855 aaKnown RBP10.12□□□□□ -0.79
SORL1-207ENST00000528339 ERVV-1B6SEH8 477 aa10.11□□□□□ -0.79
SORL1-207ENST00000528339 PRIM1P49642 420 aaKnown RBP10.11□□□□□ -0.79
SORL1-207ENST00000528339 CABP4P57796 275 aa10.11□□□□□ -0.79
SORL1-207ENST00000528339 SLC39A6Q13433 755 aa10.11□□□□□ -0.79
SORL1-207ENST00000528339 BCL2L12Q9HB09 334 aa10.11□□□□□ -0.79
SORL1-207ENST00000528339 CHPF2Q9P2E5 772 aa10.11□□□□□ -0.79
SORL1-207ENST00000528339 IL6STP40189 918 aaPredicted RBP10.11□□□□□ -0.79
SORL1-207ENST00000528339 HDAC1Q13547 482 aaPredicted RBP10.11□□□□□ -0.79
SORL1-207ENST00000528339 RABL6Q3YEC7 729 aaPredicted RBP10.11□□□□□ -0.79
SORL1-207ENST00000528339 FAM196AQ6ZSG2 479 aa10.11□□□□□ -0.79
SORL1-207ENST00000528339 ILDR1Q86SU0 546 aaPredicted RBP10.11□□□□□ -0.79
SORL1-207ENST00000528339 ECM29Q5VYK3 1845 aa10.11□□□□□ -0.79
SORL1-207ENST00000528339 FLIIQ13045 1269 aa10.11□□□□□ -0.79
SORL1-207ENST00000528339 POLA2Q14181 598 aa10.11□□□□□ -0.79
SORL1-207ENST00000528339 NEUROD2Q15784 382 aa10.11□□□□□ -0.79
SORL1-207ENST00000528339 KRT27Q7Z3Y8 459 aa10.11□□□□□ -0.79
SORL1-207ENST00000528339 TMOD3Q9NYL9 352 aa10.11□□□□□ -0.79
SORL1-207ENST00000528339 ZNF34Q8IZ26 560 aa10.1□□□□□ -0.79
SORL1-207ENST00000528339 SMARCC1Q92922 1105 aaPredicted RBP10.1□□□□□ -0.79
SORL1-207ENST00000528339 CAMTA2O94983 1202 aa10.1□□□□□ -0.79
SORL1-207ENST00000528339 ZKSCAN2Q63HK3 967 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms