RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 WDR17Q8IZU2 1322 aa10.19□□□□□ -0.78
SOX6-210ENST00000528252 HEG1Q9ULI3 1381 aa10.19□□□□□ -0.78
SOX6-210ENST00000528252 SMARCA5O60264 1052 aaPredicted RBP10.19□□□□□ -0.78
SOX6-210ENST00000528252 BMP2KLQ5H9B9 411 aa10.19□□□□□ -0.78
SOX6-210ENST00000528252 DNAAF4Q8WXU2 420 aa10.19□□□□□ -0.78
SOX6-210ENST00000528252 DCAF5Q96JK2 942 aa10.19□□□□□ -0.78
SOX6-210ENST00000528252 SRCIN1Q9C0H9 1055 aa10.19□□□□□ -0.78
SOX6-210ENST00000528252 MFAP1P55081 439 aaKnown RBP10.18□□□□□ -0.78
SOX6-210ENST00000528252 STRN4Q9NRL3 753 aa10.18□□□□□ -0.78
SOX6-210ENST00000528252 PRDM4Q9UKN5 801 aa10.18□□□□□ -0.78
SOX6-210ENST00000528252 LRRFIP2Q9Y608 721 aaKnown RBP10.18□□□□□ -0.78
SOX6-210ENST00000528252 KDM3BQ7LBC6 1761 aa10.18□□□□□ -0.78
SOX6-210ENST00000528252 UBTFL1P0CB47 393 aaPredicted RBP10.18□□□□□ -0.78
SOX6-210ENST00000528252 PLEKHM2Q8IWE5 1019 aa10.18□□□□□ -0.78
SOX6-210ENST00000528252 TBC1D32Q96NH3 1257 aa10.18□□□□□ -0.78
SOX6-210ENST00000528252 PNMA6EA0A0J9YXQ4 647 aa10.17□□□□□ -0.78
SOX6-210ENST00000528252 L1TD1Q5T7N2 865 aaKnown RBP10.17□□□□□ -0.78
SOX6-210ENST00000528252 OTUD7AQ8TE49 926 aaPredicted RBP10.17□□□□□ -0.78
SOX6-210ENST00000528252 CRYBG1Q9Y4K1 1723 aa10.17□□□□□ -0.78
SOX6-210ENST00000528252 ABCC6O95255 1503 aa10.17□□□□□ -0.78
SOX6-210ENST00000528252 CACNA1FO60840 1977 aa10.17□□□□□ -0.78
SOX6-210ENST00000528252 EVA1CP58658 441 aa10.17□□□□□ -0.78
SOX6-210ENST00000528252 BEND3Q5T5X7 828 aa10.17□□□□□ -0.78
SOX6-210ENST00000528252 ZNF496Q96IT1 587 aaPredicted RBP10.17□□□□□ -0.78
SOX6-210ENST00000528252 EXOC6BQ9Y2D4 811 aa10.17□□□□□ -0.78
SOX6-210ENST00000528252 HSP90AB1P08238 724 aaKnown RBP10.16□□□□□ -0.78
SOX6-210ENST00000528252 ATP8B2P98198 1209 aa10.16□□□□□ -0.78
SOX6-210ENST00000528252 LARP1Q6PKG0 1096 aaKnown RBP10.16□□□□□ -0.78
SOX6-210ENST00000528252 ZCRB1Q8TBF4 217 aaKnown RBP10.16□□□□□ -0.78
SOX6-210ENST00000528252 PANK2Q9BZ23 570 aa10.16□□□□□ -0.78
SOX6-210ENST00000528252 VIRMAQ69YN4 1812 aaKnown RBP10.16□□□□□ -0.78
SOX6-210ENST00000528252 CABP4P57796 275 aa10.16□□□□□ -0.78
SOX6-210ENST00000528252 ADCY9O60503 1353 aa10.16□□□□□ -0.78
SOX6-210ENST00000528252 NBPF7P0C2Y1 421 aaPredicted RBP10.15□□□□□ -0.78
SOX6-210ENST00000528252 XRCC6P12956 609 aaKnown RBP eCLIP10.15□□□□□ -0.78
SOX6-210ENST00000528252 PDE4CQ08493 712 aa10.15□□□□□ -0.78
SOX6-210ENST00000528252 AIMP1Q12904 312 aaKnown RBP10.15□□□□□ -0.78
SOX6-210ENST00000528252 TTC5Q8N0Z6 440 aa10.15□□□□□ -0.78
SOX6-210ENST00000528252 CARD10Q9BWT7 1032 aa10.15□□□□□ -0.78
SOX6-210ENST00000528252 DDX21Q9NR30 783 aaKnown RBP eCLIP10.15□□□□□ -0.78
SOX6-210ENST00000528252 HYPKQ9NX55 129 aa10.15□□□□□ -0.78
SOX6-210ENST00000528252 MAP3K2Q9Y2U5 619 aa10.15□□□□□ -0.78
SOX6-210ENST00000528252 PXDNLA1KZ92 1463 aa10.15□□□□□ -0.78
SOX6-210ENST00000528252 COL5A2P05997 1499 aaPredicted RBP10.15□□□□□ -0.78
SOX6-210ENST00000528252 GSPT1P15170 499 aaKnown RBP10.15□□□□□ -0.78
SOX6-210ENST00000528252 C22orf23Q9BZE7 217 aa10.15□□□□□ -0.78
SOX6-210ENST00000528252 IL2RBP14784 551 aa10.14□□□□□ -0.79
SOX6-210ENST00000528252 PDIA6Q15084 440 aa10.14□□□□□ -0.79
SOX6-210ENST00000528252 KSR2Q6VAB6 950 aa10.14□□□□□ -0.79
SOX6-210ENST00000528252 DDX54Q8TDD1 881 aaKnown RBP10.14□□□□□ -0.79
SOX6-210ENST00000528252 PLEKHG2Q9H7P9 1386 aa10.14□□□□□ -0.79
SOX6-210ENST00000528252 ADAMTS7Q9UKP4 1686 aa10.14□□□□□ -0.79
SOX6-210ENST00000528252 MYL6BP14649 208 aa10.14□□□□□ -0.79
SOX6-210ENST00000528252 USP16Q9Y5T5 823 aa10.14□□□□□ -0.79
SOX6-210ENST00000528252 PCDH11XQ9BZA7 1347 aa10.13□□□□□ -0.79
SOX6-210ENST00000528252 PCDH11YQ9BZA8 1340 aa10.13□□□□□ -0.79
SOX6-210ENST00000528252 TTC22Q5TAA0 569 aa10.13□□□□□ -0.79
SOX6-210ENST00000528252 TBC1D9Q6ZT07 1266 aa10.13□□□□□ -0.79
SOX6-210ENST00000528252 SNRPA1P09661 255 aaKnown RBP10.13□□□□□ -0.79
SOX6-210ENST00000528252 CWF19L2Q2TBE0 894 aaKnown RBP10.13□□□□□ -0.79
SOX6-210ENST00000528252 PPP1R42Q7Z4L9 355 aa10.13□□□□□ -0.79
SOX6-210ENST00000528252 FMNL2Q96PY5 1086 aa10.13□□□□□ -0.79
SOX6-210ENST00000528252 SIPA1L3O60292 1781 aaPredicted RBP10.13□□□□□ -0.79
SOX6-210ENST00000528252 DDX58O95786 925 aaKnown RBP10.13□□□□□ -0.79
SOX6-210ENST00000528252 PIP4K2AP48426 406 aaPredicted RBP10.13□□□□□ -0.79
SOX6-210ENST00000528252 TMEM132AQ24JP5 1023 aa10.13□□□□□ -0.79
SOX6-210ENST00000528252 SSH3Q8TE77 659 aa10.13□□□□□ -0.79
SOX6-210ENST00000528252 LRRCC1Q9C099 1032 aa10.13□□□□□ -0.79
SOX6-210ENST00000528252 BTG4Q9NY30 223 aa10.13□□□□□ -0.79
SOX6-210ENST00000528252 SRGAP3O43295 1099 aa10.12□□□□□ -0.79
SOX6-210ENST00000528252 C9orf78Q9NZ63 289 aaPredicted RBP10.12□□□□□ -0.79
SOX6-210ENST00000528252 SCN11AQ9UI33 1791 aa10.12□□□□□ -0.79
SOX6-210ENST00000528252 CDC45O75419 566 aa10.12□□□□□ -0.79
SOX6-210ENST00000528252 COPS6Q7L5N1 327 aa10.12□□□□□ -0.79
SOX6-210ENST00000528252 XAGE3Q8WTP9 111 aa10.12□□□□□ -0.79
SOX6-210ENST00000528252 PDCL3Q9H2J4 239 aa10.12□□□□□ -0.79
SOX6-210ENST00000528252 SURF6O75683 361 aaKnown RBP10.11□□□□□ -0.79
SOX6-210ENST00000528252 ALDH1L1O75891 902 aa10.11□□□□□ -0.79
SOX6-210ENST00000528252 BECN1Q14457 450 aa10.11□□□□□ -0.79
SOX6-210ENST00000528252 RIC3Q7Z5B4 369 aa10.11□□□□□ -0.79
SOX6-210ENST00000528252 LINS1Q8NG48 757 aa10.11□□□□□ -0.79
SOX6-210ENST00000528252 IBTKQ9P2D0 1353 aaPredicted RBP10.11□□□□□ -0.79
SOX6-210ENST00000528252 SDSP20132 328 aa10.11□□□□□ -0.79
SOX6-210ENST00000528252 PDE1AP54750 535 aa10.11□□□□□ -0.79
SOX6-210ENST00000528252 ERBB4Q15303 1308 aa10.1□□□□□ -0.79
SOX6-210ENST00000528252 MRC1P22897 1456 aa10.1□□□□□ -0.79
SOX6-210ENST00000528252 NHSL1Q5SYE7 1610 aa10.1□□□□□ -0.79
SOX6-210ENST00000528252 ERVV-2B6SEH9 535 aa10.1□□□□□ -0.79
SOX6-210ENST00000528252 POLA2Q14181 598 aa10.1□□□□□ -0.79
SOX6-210ENST00000528252 TSHZ3Q63HK5 1081 aa10.1□□□□□ -0.79
SOX6-210ENST00000528252 PKD1L3Q7Z443 1732 aa10.1□□□□□ -0.79
SOX6-210ENST00000528252 GOLGA6L3A6NEY3 463 aa10.1□□□□□ -0.79
SOX6-210ENST00000528252 NKX1-1Q15270 411 aaPredicted RBP10.1□□□□□ -0.79
SOX6-210ENST00000528252 IL1RAPL2Q9NP60 686 aa10.1□□□□□ -0.79
SOX6-210ENST00000528252 PTCD1O75127 700 aaKnown RBP10.09□□□□□ -0.79
SOX6-210ENST00000528252 TBC1D2Q9BYX2 928 aa10.09□□□□□ -0.79
SOX6-210ENST00000528252 SLKQ9H2G2 1235 aaPredicted RBP10.09□□□□□ -0.79
SOX6-210ENST00000528252 OSBPL3Q9H4L5 887 aa10.09□□□□□ -0.79
SOX6-210ENST00000528252 GRM8O00222 908 aa10.09□□□□□ -0.79
SOX6-210ENST00000528252 IGKV5-2P06315 115 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms