RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
CCDC90B-208ENST00000527025 ZNF579Q8NAF0 562 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-208ENST00000527025 MTFR1LQ9H019 292 aa11.82□□□□□ -0.52
CCDC90B-208ENST00000527025 DNAJC10Q8IXB1 793 aa11.81□□□□□ -0.52
CCDC90B-208ENST00000527025 CICQ96RK0 1608 aaPredicted RBP11.81□□□□□ -0.52
CCDC90B-208ENST00000527025 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
CCDC90B-208ENST00000527025 PHF14O94880 888 aa11.8□□□□□ -0.52
CCDC90B-208ENST00000527025 INTS5Q6P9B9 1019 aaKnown RBP11.8□□□□□ -0.52
CCDC90B-208ENST00000527025 THUMPD2Q9BTF0 503 aaKnown RBP11.8□□□□□ -0.52
CCDC90B-208ENST00000527025 ADAMTS8Q9UP79 889 aa11.8□□□□□ -0.52
CCDC90B-208ENST00000527025 GNPATO15228 680 aa11.79□□□□□ -0.52
CCDC90B-208ENST00000527025 MSL1Q68DK7 614 aa11.79□□□□□ -0.52
CCDC90B-208ENST00000527025 CCDC146Q8IYE0 955 aa11.79□□□□□ -0.52
CCDC90B-208ENST00000527025 ZNF496Q96IT1 587 aaPredicted RBP11.79□□□□□ -0.52
CCDC90B-208ENST00000527025 AK7Q96M32 723 aa11.79□□□□□ -0.52
CCDC90B-208ENST00000527025 MIS18AQ9NYP9 233 aa11.79□□□□□ -0.52
CCDC90B-208ENST00000527025 CYP19A1P11511 503 aaPredicted RBP11.78□□□□□ -0.52
CCDC90B-208ENST00000527025 CRKLP46109 303 aaKnown RBP11.78□□□□□ -0.52
CCDC90B-208ENST00000527025 CLCN6P51797 869 aa11.78□□□□□ -0.52
CCDC90B-208ENST00000527025 NFE2L2Q16236 605 aa11.78□□□□□ -0.52
CCDC90B-208ENST00000527025 RC3H1Q5TC82 1133 aaKnown RBP11.78□□□□□ -0.52
CCDC90B-208ENST00000527025 ZNF790Q6PG37 636 aa11.78□□□□□ -0.52
CCDC90B-208ENST00000527025 SLC16A10Q8TF71 515 aa11.78□□□□□ -0.52
CCDC90B-208ENST00000527025 CNTNAP4Q9C0A0 1308 aa11.78□□□□□ -0.52
CCDC90B-208ENST00000527025 PRAMEF22A3QJZ6 481 aa11.77□□□□□ -0.53
CCDC90B-208ENST00000527025 TEFQ10587 303 aa11.77□□□□□ -0.53
CCDC90B-208ENST00000527025 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
CCDC90B-208ENST00000527025 UTRNP46939 3433 aa11.77□□□□□ -0.53
CCDC90B-208ENST00000527025 C4AP0C0L4 1744 aa11.77□□□□□ -0.53
CCDC90B-208ENST00000527025 GOLGB1Q14789 3259 aaKnown RBP11.76□□□□□ -0.53
CCDC90B-208ENST00000527025 BTBD11A6QL63 1104 aa11.76□□□□□ -0.53
CCDC90B-208ENST00000527025 HTATSF1O43719 755 aaKnown RBP11.76□□□□□ -0.53
CCDC90B-208ENST00000527025 RPS6KA4O75676 772 aa11.76□□□□□ -0.53
CCDC90B-208ENST00000527025 SSFA2P28290 1259 aa11.76□□□□□ -0.53
CCDC90B-208ENST00000527025 ARXQ96QS3 562 aa11.76□□□□□ -0.53
CCDC90B-208ENST00000527025 FHDC1Q9C0D6 1143 aaPredicted RBP11.76□□□□□ -0.53
CCDC90B-208ENST00000527025 RRP7AQ9Y3A4 280 aaKnown RBP11.76□□□□□ -0.53
CCDC90B-208ENST00000527025 TMPOP42166 694 aaKnown RBP11.75□□□□□ -0.53
CCDC90B-208ENST00000527025 FLAD1Q8NFF5 587 aa11.75□□□□□ -0.53
CCDC90B-208ENST00000527025 SYT17Q9BSW7 474 aa11.75□□□□□ -0.53
CCDC90B-208ENST00000527025 PPP1R1BQ9UD71 204 aaPredicted RBP11.75□□□□□ -0.53
CCDC90B-208ENST00000527025 HEG1Q9ULI3 1381 aa11.75□□□□□ -0.53
CCDC90B-208ENST00000527025 RIPK4P57078 832 aa11.74□□□□□ -0.53
CCDC90B-208ENST00000527025 TRAPPC3LQ5T215 181 aa11.74□□□□□ -0.53
CCDC90B-208ENST00000527025 VSIG10Q8N0Z9 540 aa11.74□□□□□ -0.53
CCDC90B-208ENST00000527025 RTF1Q92541 710 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-208ENST00000527025 SRP68Q9UHB9 627 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-208ENST00000527025 TRIM35Q9UPQ4 493 aa11.74□□□□□ -0.53
CCDC90B-208ENST00000527025 ZBTB1Q9Y2K1 713 aa11.74□□□□□ -0.53
CCDC90B-208ENST00000527025 RTCBQ9Y3I0 505 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-208ENST00000527025 USP16Q9Y5T5 823 aa11.74□□□□□ -0.53
CCDC90B-208ENST00000527025 KDM3BQ7LBC6 1761 aa11.74□□□□□ -0.53
CCDC90B-208ENST00000527025 GALR2O43603 387 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-208ENST00000527025 GYS1P13807 737 aa11.73□□□□□ -0.53
CCDC90B-208ENST00000527025 TAF7Q15545 349 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-208ENST00000527025 RUNDC1Q96C34 613 aa11.73□□□□□ -0.53
CCDC90B-208ENST00000527025 CCDC87Q9NVE4 849 aa11.73□□□□□ -0.53
CCDC90B-208ENST00000527025 SOS1Q07889 1333 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-208ENST00000527025 MAPK8IP3Q9UPT6 1336 aa11.72□□□□□ -0.53
CCDC90B-208ENST00000527025 SENP3-EIF4A1A0A087X0R7 540 aa11.72□□□□□ -0.53
CCDC90B-208ENST00000527025 A1BGP04217 495 aa11.72□□□□□ -0.53
CCDC90B-208ENST00000527025 PIP4K2AP48426 406 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-208ENST00000527025 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-208ENST00000527025 NEUROD2Q15784 382 aa11.72□□□□□ -0.53
CCDC90B-208ENST00000527025 TTC5Q8N0Z6 440 aa11.72□□□□□ -0.53
CCDC90B-208ENST00000527025 NLGN2Q8NFZ4 835 aa11.72□□□□□ -0.53
CCDC90B-208ENST00000527025 PNISRQ8TF01 805 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-208ENST00000527025 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-208ENST00000527025 CANXP27824 592 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-208ENST00000527025 FKBP8Q14318 412 aa11.71□□□□□ -0.53
CCDC90B-208ENST00000527025 WDR43Q15061 677 aaKnown RBP eCLIP11.71□□□□□ -0.53
CCDC90B-208ENST00000527025 DCBLD2Q96PD2 775 aa11.71□□□□□ -0.53
CCDC90B-208ENST00000527025 FMNL2Q96PY5 1086 aa11.71□□□□□ -0.53
CCDC90B-208ENST00000527025 PNNQ9H307 717 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-208ENST00000527025 BCL2L12Q9HB09 334 aa11.71□□□□□ -0.53
CCDC90B-208ENST00000527025 USP42Q9H9J4 1324 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-208ENST00000527025 NBPF26B4DH59 902 aa11.7□□□□□ -0.54
CCDC90B-208ENST00000527025 POLD1P28340 1107 aa11.7□□□□□ -0.54
CCDC90B-208ENST00000527025 EIF5P55010 431 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-208ENST00000527025 NBPF10Q6P3W6 841 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-208ENST00000527025 NBPF15Q8N660 670 aa11.7□□□□□ -0.54
CCDC90B-208ENST00000527025 APAF1O14727 1248 aa11.69□□□□□ -0.54
CCDC90B-208ENST00000527025 ANP32CO43423 234 aa11.69□□□□□ -0.54
CCDC90B-208ENST00000527025 NEFMP07197 916 aa11.69□□□□□ -0.54
CCDC90B-208ENST00000527025 MMP10P09238 476 aa11.69□□□□□ -0.54
CCDC90B-208ENST00000527025 RFC4P35249 363 aa11.69□□□□□ -0.54
CCDC90B-208ENST00000527025 EIF4A1P60842 406 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-208ENST00000527025 USPL1Q5W0Q7 1092 aa11.69□□□□□ -0.54
CCDC90B-208ENST00000527025 GIGYF1O75420 1035 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-208ENST00000527025 STARD3NLO95772 234 aa11.68□□□□□ -0.54
CCDC90B-208ENST00000527025 SNRPA1P09661 255 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-208ENST00000527025 TM4SF1P30408 202 aa11.68□□□□□ -0.54
CCDC90B-208ENST00000527025 DDR1Q08345 913 aa11.68□□□□□ -0.54
CCDC90B-208ENST00000527025 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
CCDC90B-208ENST00000527025 COL15A1P39059 1388 aa11.67□□□□□ -0.54
CCDC90B-208ENST00000527025 KIAA1551Q9HCM1 1747 aa11.67□□□□□ -0.54
CCDC90B-208ENST00000527025 KRT24Q2M2I5 525 aa11.67□□□□□ -0.54
CCDC90B-208ENST00000527025 DIEXFQ68CQ4 756 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-208ENST00000527025 NLGN1Q8N2Q7 840 aa11.67□□□□□ -0.54
CCDC90B-208ENST00000527025 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms