RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 PNMA6EA0A0J9YXQ4 647 aa21.98■■□□□ 1.11
PCDHB18P-201ENST00000524813 SRCIN1Q9C0H9 1055 aa21.98■■□□□ 1.11
PCDHB18P-201ENST00000524813 ACEP12821 1306 aa21.98■■□□□ 1.11
PCDHB18P-201ENST00000524813 NOLC1Q14978 699 aaKnown RBP eCLIP21.97■■□□□ 1.11
PCDHB18P-201ENST00000524813 CCDC183Q5T5S1 534 aa21.97■■□□□ 1.11
PCDHB18P-201ENST00000524813 SMAP1Q8IYB5 467 aaPredicted RBP21.97■■□□□ 1.11
PCDHB18P-201ENST00000524813 TSPYL4Q9UJ04 414 aa21.97■■□□□ 1.11
PCDHB18P-201ENST00000524813 ADCY5O95622 1261 aa21.96■■□□□ 1.11
PCDHB18P-201ENST00000524813 TMEM87AQ8NBN3 555 aa21.96■■□□□ 1.11
PCDHB18P-201ENST00000524813 JARID2Q92833 1246 aaPredicted RBP21.96■■□□□ 1.11
PCDHB18P-201ENST00000524813 STAP2Q9UGK3 403 aa21.96■■□□□ 1.11
PCDHB18P-201ENST00000524813 RPAP1Q9BWH6 1393 aaPredicted RBP21.96■■□□□ 1.11
PCDHB18P-201ENST00000524813 ATP8B2P98198 1209 aa21.96■■□□□ 1.11
PCDHB18P-201ENST00000524813 TPRNQ4KMQ1 711 aa21.96■■□□□ 1.11
PCDHB18P-201ENST00000524813 TTC12Q9H892 705 aaPredicted RBP21.96■■□□□ 1.11
PCDHB18P-201ENST00000524813 CNPY2Q9Y2B0 182 aa21.96■■□□□ 1.11
PCDHB18P-201ENST00000524813 PRIMPOLQ96LW4 560 aa21.95■■□□□ 1.1
PCDHB18P-201ENST00000524813 IL25Q9H293 177 aa21.95■■□□□ 1.1
PCDHB18P-201ENST00000524813 HSP90AB2PQ58FF8 381 aa21.95■■□□□ 1.1
PCDHB18P-201ENST00000524813 CCDC94Q9BW85 323 aaPredicted RBP21.95■■□□□ 1.1
PCDHB18P-201ENST00000524813 FOXO3O43524 673 aa21.94■■□□□ 1.1
PCDHB18P-201ENST00000524813 HCLS1P14317 486 aaPredicted RBP21.94■■□□□ 1.1
PCDHB18P-201ENST00000524813 HSPA4P34932 840 aa21.94■■□□□ 1.1
PCDHB18P-201ENST00000524813 PLEKHG5O94827 1062 aa21.94■■□□□ 1.1
PCDHB18P-201ENST00000524813 GNAI3P08754 354 aa21.94■■□□□ 1.1
PCDHB18P-201ENST00000524813 C17orf53Q8N3J3 647 aaPredicted RBP21.94■■□□□ 1.1
PCDHB18P-201ENST00000524813 TSC1Q92574 1164 aa21.94■■□□□ 1.1
PCDHB18P-201ENST00000524813 NWD1Q149M9 1564 aa21.93■■□□□ 1.1
PCDHB18P-201ENST00000524813 C14orf37Q86TY3 774 aa21.92■■□□□ 1.1
PCDHB18P-201ENST00000524813 STK31Q9BXU1 1019 aa21.92■■□□□ 1.1
PCDHB18P-201ENST00000524813 PLEKHG3A1L390 1219 aa21.92■■□□□ 1.1
PCDHB18P-201ENST00000524813 LETM1O95202 739 aaPredicted RBP21.92■■□□□ 1.1
PCDHB18P-201ENST00000524813 HMGN5P82970 282 aaKnown RBP21.92■■□□□ 1.1
PCDHB18P-201ENST00000524813 RTF1Q92541 710 aaKnown RBP21.92■■□□□ 1.1
PCDHB18P-201ENST00000524813 USP6P35125 1406 aa21.91■■□□□ 1.1
PCDHB18P-201ENST00000524813 TCHHQ07283 1943 aa21.91■■□□□ 1.1
PCDHB18P-201ENST00000524813 ZSCAN22P10073 491 aaPredicted RBP21.91■■□□□ 1.1
PCDHB18P-201ENST00000524813 PRDM10Q9NQV6 1147 aa21.91■■□□□ 1.1
PCDHB18P-201ENST00000524813 FKBP5Q13451 457 aaPredicted RBP21.9■■□□□ 1.1
PCDHB18P-201ENST00000524813 MTHFSDQ2M296 383 aaKnown RBP21.9■■□□□ 1.1
PCDHB18P-201ENST00000524813 ZNF710Q8N1W2 664 aa21.9■■□□□ 1.1
PCDHB18P-201ENST00000524813 LRRFIP2Q9Y608 721 aaKnown RBP21.9■■□□□ 1.1
PCDHB18P-201ENST00000524813 ADGRL3Q9HAR2 1447 aa21.9■■□□□ 1.1
PCDHB18P-201ENST00000524813 EPB41L2O43491 1005 aaKnown RBP21.9■■□□□ 1.1
PCDHB18P-201ENST00000524813 GTF2F1P35269 517 aaKnown RBP eCLIP21.9■■□□□ 1.1
PCDHB18P-201ENST00000524813 UBE2HP62256 183 aa21.9■■□□□ 1.1
PCDHB18P-201ENST00000524813 FLIIQ13045 1269 aa21.9■■□□□ 1.1
PCDHB18P-201ENST00000524813 NGDNQ8NEJ9 315 aaKnown RBP21.9■■□□□ 1.1
PCDHB18P-201ENST00000524813 ARHGEF10O15013 1369 aa21.89■■□□□ 1.1
PCDHB18P-201ENST00000524813 AOX1Q06278 1338 aa21.89■■□□□ 1.1
PCDHB18P-201ENST00000524813 IL1RAPL2Q9NP60 686 aa21.89■■□□□ 1.1
PCDHB18P-201ENST00000524813 LMTK3Q96Q04 1460 aa21.89■■□□□ 1.09
PCDHB18P-201ENST00000524813 ANKARQ7Z5J8 1434 aa21.89■■□□□ 1.09
PCDHB18P-201ENST00000524813 TTC21BQ7Z4L5 1316 aa21.89■■□□□ 1.09
PCDHB18P-201ENST00000524813 KDM4AO75164 1064 aa21.89■■□□□ 1.09
PCDHB18P-201ENST00000524813 SPTLC3Q9NUV7 552 aa21.89■■□□□ 1.09
PCDHB18P-201ENST00000524813 MAP4K4O95819 1239 aaPredicted RBP21.88■■□□□ 1.09
PCDHB18P-201ENST00000524813 NUTM1Q86Y26 1132 aa21.88■■□□□ 1.09
PCDHB18P-201ENST00000524813 MAP3K19Q56UN5 1328 aa21.88■■□□□ 1.09
PCDHB18P-201ENST00000524813 STX6O43752 255 aa21.88■■□□□ 1.09
PCDHB18P-201ENST00000524813 LARP6Q9BRS8 491 aaKnown RBP21.88■■□□□ 1.09
PCDHB18P-201ENST00000524813 SYT1P21579 422 aa21.87■■□□□ 1.09
PCDHB18P-201ENST00000524813 NECTIN2Q92692 538 aa21.87■■□□□ 1.09
PCDHB18P-201ENST00000524813 SNX14Q9Y5W7 946 aa21.87■■□□□ 1.09
PCDHB18P-201ENST00000524813 STRCP1A6NGW2 1772 aa21.87■■□□□ 1.09
PCDHB18P-201ENST00000524813 SOX12O15370 315 aa21.87■■□□□ 1.09
PCDHB18P-201ENST00000524813 FIBPO43427 364 aa21.87■■□□□ 1.09
PCDHB18P-201ENST00000524813 AK2P54819 239 aa21.87■■□□□ 1.09
PCDHB18P-201ENST00000524813 TTC14Q96N46 770 aa21.87■■□□□ 1.09
PCDHB18P-201ENST00000524813 RGPD1P0DJD0 1748 aa21.86■■□□□ 1.09
PCDHB18P-201ENST00000524813 PEAK1Q9H792 1746 aa21.86■■□□□ 1.09
PCDHB18P-201ENST00000524813 PLCB2Q00722 1185 aa21.86■■□□□ 1.09
PCDHB18P-201ENST00000524813 RAD50Q92878 1312 aa21.86■■□□□ 1.09
PCDHB18P-201ENST00000524813 F13A1P00488 732 aa21.85■■□□□ 1.09
PCDHB18P-201ENST00000524813 GIMAP6Q6P9H5 292 aa21.85■■□□□ 1.09
PCDHB18P-201ENST00000524813 PROSER2Q86WR7 435 aaPredicted RBP21.85■■□□□ 1.09
PCDHB18P-201ENST00000524813 LIMCH1Q9UPQ0 1083 aa21.85■■□□□ 1.09
PCDHB18P-201ENST00000524813 KIF3AQ9Y496 699 aa21.85■■□□□ 1.09
PCDHB18P-201ENST00000524813 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.85■■□□□ 1.09
PCDHB18P-201ENST00000524813 OVOS2A0A0J9YW53 1432 aa21.85■■□□□ 1.09
PCDHB18P-201ENST00000524813 OVOS2Q6IE36 1432 aa21.85■■□□□ 1.09
PCDHB18P-201ENST00000524813 FAM177BA6PVY3 158 aa21.84■■□□□ 1.09
PCDHB18P-201ENST00000524813 SGSM2O43147 1006 aa21.84■■□□□ 1.09
PCDHB18P-201ENST00000524813 CCDC30Q5VVM6 783 aa21.84■■□□□ 1.09
PCDHB18P-201ENST00000524813 RUFY3Q7L099 469 aa21.84■■□□□ 1.09
PCDHB18P-201ENST00000524813 FUCA2Q9BTY2 467 aa21.84■■□□□ 1.09
PCDHB18P-201ENST00000524813 SMC3Q9UQE7 1217 aa21.84■■□□□ 1.09
PCDHB18P-201ENST00000524813 RASEFQ8IZ41 740 aa21.84■■□□□ 1.09
PCDHB18P-201ENST00000524813 ATP6V1DQ9Y5K8 247 aa21.83■■□□□ 1.09
PCDHB18P-201ENST00000524813 SOS1Q07889 1333 aaPredicted RBP21.83■■□□□ 1.09
PCDHB18P-201ENST00000524813 LSG1Q9H089 658 aaKnown RBP21.83■■□□□ 1.08
PCDHB18P-201ENST00000524813 USP44Q9H0E7 712 aa21.83■■□□□ 1.08
PCDHB18P-201ENST00000524813 AP5Z1O43299 807 aa21.82■■□□□ 1.08
PCDHB18P-201ENST00000524813 UBTFL1P0CB47 393 aaPredicted RBP21.82■■□□□ 1.08
PCDHB18P-201ENST00000524813 PI4K2BQ8TCG2 481 aa21.82■■□□□ 1.08
PCDHB18P-201ENST00000524813 STRCQ7RTU9 1775 aa21.82■■□□□ 1.08
PCDHB18P-201ENST00000524813 SSH3Q8TE77 659 aa21.81■■□□□ 1.08
PCDHB18P-201ENST00000524813 PIK3C2AO00443 1686 aa21.81■■□□□ 1.08
PCDHB18P-201ENST00000524813 KIAA1524Q8TCG1 905 aa21.81■■□□□ 1.08
PCDHB18P-201ENST00000524813 SURF6O75683 361 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms