RNA–Protein interactions for RNA: ENST00000524361.5

LINC00534-204, long intergenic non-protein coding RNA 534, humanhuman

TSL 3

Gene LINC00534, Length 620 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-204ENST00000524361 POLD1P28340 1107 aa8.56□□□□□ -1.04
LINC00534-204ENST00000524361 ZNF784Q8NCA9 323 aaPredicted RBP8.56□□□□□ -1.04
LINC00534-204ENST00000524361 NLGN2Q8NFZ4 835 aa8.56□□□□□ -1.04
LINC00534-204ENST00000524361 NSD2O96028 1365 aa8.56□□□□□ -1.04
LINC00534-204ENST00000524361 SBF2Q86WG5 1849 aa8.55□□□□□ -1.04
LINC00534-204ENST00000524361 KIF3CO14782 793 aa8.55□□□□□ -1.04
LINC00534-204ENST00000524361 SLC16A10Q8TF71 515 aa8.55□□□□□ -1.04
LINC00534-204ENST00000524361 EYA1Q99502 592 aa8.55□□□□□ -1.04
LINC00534-204ENST00000524361 INSRP06213 1382 aa8.55□□□□□ -1.04
LINC00534-204ENST00000524361 NSD3Q9BZ95 1437 aa8.54□□□□□ -1.04
LINC00534-204ENST00000524361 AMIGO3Q86WK7 504 aa8.54□□□□□ -1.04
LINC00534-204ENST00000524361 PIGBQ92521 554 aa8.54□□□□□ -1.04
LINC00534-204ENST00000524361 ZSWIM6Q9HCJ5 1215 aa8.54□□□□□ -1.04
LINC00534-204ENST00000524361 POLKQ9UBT6 870 aa8.54□□□□□ -1.04
LINC00534-204ENST00000524361 UTRNP46939 3433 aa8.54□□□□□ -1.04
LINC00534-204ENST00000524361 CGNL1Q0VF96 1302 aa8.54□□□□□ -1.04
LINC00534-204ENST00000524361 RTL1A6NKG5 1358 aa8.53□□□□□ -1.04
LINC00534-204ENST00000524361 FLT4P35916 1363 aa8.53□□□□□ -1.04
LINC00534-204ENST00000524361 RIMBP2O15034 1052 aa8.53□□□□□ -1.04
LINC00534-204ENST00000524361 PPP1R37O75864 691 aa8.53□□□□□ -1.04
LINC00534-204ENST00000524361 PHF14O94880 888 aa8.53□□□□□ -1.04
LINC00534-204ENST00000524361 HSPA5P11021 654 aaKnown RBP8.53□□□□□ -1.04
LINC00534-204ENST00000524361 PANK3Q9H999 370 aa8.53□□□□□ -1.04
LINC00534-204ENST00000524361 WWC3Q9ULE0 1092 aa8.53□□□□□ -1.04
LINC00534-204ENST00000524361 SMG6Q86US8 1419 aaKnown RBP8.53□□□□□ -1.04
LINC00534-204ENST00000524361 CASZ1Q86V15 1759 aa8.53□□□□□ -1.04
LINC00534-204ENST00000524361 WASHC2AQ641Q2 1341 aa8.53□□□□□ -1.04
LINC00534-204ENST00000524361 PCDH11XQ9BZA7 1347 aa8.53□□□□□ -1.04
LINC00534-204ENST00000524361 PCDH11YQ9BZA8 1340 aa8.53□□□□□ -1.04
LINC00534-204ENST00000524361 PALLDQ8WX93 1383 aa8.52□□□□□ -1.05
LINC00534-204ENST00000524361 EIF4A2Q14240 407 aaKnown RBP8.52□□□□□ -1.05
LINC00534-204ENST00000524361 CCER1Q8TC90 406 aaPredicted RBP8.52□□□□□ -1.05
LINC00534-204ENST00000524361 ASAP1Q9ULH1 1129 aa8.52□□□□□ -1.05
LINC00534-204ENST00000524361 SPG7Q9UQ90 795 aa8.52□□□□□ -1.05
LINC00534-204ENST00000524361 LTN1O94822 1766 aa8.52□□□□□ -1.05
LINC00534-204ENST00000524361 MYOM1P52179 1685 aa8.52□□□□□ -1.05
LINC00534-204ENST00000524361 NHSQ6T4R5 1651 aa8.52□□□□□ -1.05
LINC00534-204ENST00000524361 WNK3Q9BYP7 1800 aa8.52□□□□□ -1.05
LINC00534-204ENST00000524361 C2orf72A6NCS6 295 aa8.51□□□□□ -1.05
LINC00534-204ENST00000524361 YBX3P16989 372 aaKnown RBP eCLIP8.51□□□□□ -1.05
LINC00534-204ENST00000524361 ARSIQ5FYB1 569 aa8.51□□□□□ -1.05
LINC00534-204ENST00000524361 VARS2Q5ST30 1063 aaKnown RBP8.51□□□□□ -1.05
LINC00534-204ENST00000524361 KHSRPQ92945 711 aaKnown RBP eCLIP8.51□□□□□ -1.054e-7■■□□□ 13.9
LINC00534-204ENST00000524361 RGPD3A6NKT7 1758 aaPredicted RBP8.5□□□□□ -1.05
LINC00534-204ENST00000524361 RGPD4Q7Z3J3 1758 aa8.5□□□□□ -1.05
LINC00534-204ENST00000524361 USP54Q70EL1 1684 aa8.5□□□□□ -1.05
LINC00534-204ENST00000524361 EIF4G2P78344 907 aaKnown RBP eCLIP8.5□□□□□ -1.05
LINC00534-204ENST00000524361 NKX1-1Q15270 411 aaPredicted RBP8.5□□□□□ -1.05
LINC00534-204ENST00000524361 LINC00116Q8NCU8 138 aa8.5□□□□□ -1.05
LINC00534-204ENST00000524361 AK7Q96M32 723 aa8.5□□□□□ -1.05
LINC00534-204ENST00000524361 TMOD3Q9NYL9 352 aa8.5□□□□□ -1.05
LINC00534-204ENST00000524361 BTAF1O14981 1849 aa8.5□□□□□ -1.05
LINC00534-204ENST00000524361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.49□□□□□ -1.05
LINC00534-204ENST00000524361 LOC102724428A0A0B4J2F2 783 aa8.49□□□□□ -1.05
LINC00534-204ENST00000524361 PHKG2P15735 406 aa8.49□□□□□ -1.05
LINC00534-204ENST00000524361 ATP6V1AP38606 617 aa8.49□□□□□ -1.05
LINC00534-204ENST00000524361 SIK1P57059 783 aa8.49□□□□□ -1.05
LINC00534-204ENST00000524361 ITPK1Q13572 414 aa8.49□□□□□ -1.05
LINC00534-204ENST00000524361 CNGB1Q14028 1251 aaPredicted RBP8.49□□□□□ -1.05
LINC00534-204ENST00000524361 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC00534-204ENST00000524361 IFNL2Q8IZJ0 200 aa8.49□□□□□ -1.05
LINC00534-204ENST00000524361 SMARCC1Q92922 1105 aaPredicted RBP8.49□□□□□ -1.05
LINC00534-204ENST00000524361 ATG3Q9NT62 314 aa8.49□□□□□ -1.05
LINC00534-204ENST00000524361 PAPPAQ13219 1627 aa8.49□□□□□ -1.05
LINC00534-204ENST00000524361 FAM208AQ9UK61 1670 aaKnown RBP8.49□□□□□ -1.05
LINC00534-204ENST00000524361 KAT6BQ8WYB5 2073 aa8.49□□□□□ -1.05
LINC00534-204ENST00000524361 KIF24Q5T7B8 1368 aa8.48□□□□□ -1.05
LINC00534-204ENST00000524361 GNPATO15228 680 aa8.48□□□□□ -1.05
LINC00534-204ENST00000524361 MORC1Q86VD1 984 aa8.48□□□□□ -1.05
LINC00534-204ENST00000524361 MAP3K5Q99683 1374 aa8.48□□□□□ -1.05
LINC00534-204ENST00000524361 GTPBP6O43824 516 aaPredicted RBP8.47□□□□□ -1.05
LINC00534-204ENST00000524361 AEBP1Q8IUX7 1158 aa8.47□□□□□ -1.05
LINC00534-204ENST00000524361 FLAD1Q8NFF5 587 aa8.47□□□□□ -1.05
LINC00534-204ENST00000524361 RGPD2P0DJD1 1756 aa8.47□□□□□ -1.05
LINC00534-204ENST00000524361 SENP3-EIF4A1A0A087X0R7 540 aa8.46□□□□□ -1.06
LINC00534-204ENST00000524361 GRIN3BO60391 1043 aa8.46□□□□□ -1.06
LINC00534-204ENST00000524361 C1QTNF8P60827 252 aa8.46□□□□□ -1.06
LINC00534-204ENST00000524361 SLC4A9Q96Q91 983 aa8.46□□□□□ -1.06
LINC00534-204ENST00000524361 CD2APQ9Y5K6 639 aa8.46□□□□□ -1.06
LINC00534-204ENST00000524361 CLSPNQ9HAW4 1339 aa8.46□□□□□ -1.06
LINC00534-204ENST00000524361 PTCD1O75127 700 aaKnown RBP8.45□□□□□ -1.06
LINC00534-204ENST00000524361 MTHFSP49914 203 aa8.45□□□□□ -1.06
LINC00534-204ENST00000524361 CABP4P57796 275 aa8.45□□□□□ -1.06
LINC00534-204ENST00000524361 PLEKHO1Q53GL0 409 aaPredicted RBP8.45□□□□□ -1.06
LINC00534-204ENST00000524361 SULT6B1Q6IMI4 303 aa8.45□□□□□ -1.06
LINC00534-204ENST00000524361 ZNF530Q6P9A1 599 aaPredicted RBP8.45□□□□□ -1.06
LINC00534-204ENST00000524361 ZNF687Q8N1G0 1237 aa8.45□□□□□ -1.06
LINC00534-204ENST00000524361 ZNF526Q8TF50 670 aaPredicted RBP8.45□□□□□ -1.06
LINC00534-204ENST00000524361 KNSTRNQ9Y448 316 aa8.45□□□□□ -1.06
LINC00534-204ENST00000524361 DOT1LQ8TEK3 1739 aa8.45□□□□□ -1.06
LINC00534-204ENST00000524361 GOLGB1Q14789 3259 aaKnown RBP8.44□□□□□ -1.06
LINC00534-204ENST00000524361 MMP10P09238 476 aa8.44□□□□□ -1.06
LINC00534-204ENST00000524361 SSFA2P28290 1259 aa8.44□□□□□ -1.06
LINC00534-204ENST00000524361 NEUROD2Q15784 382 aa8.44□□□□□ -1.06
LINC00534-204ENST00000524361 TRAPPC3LQ5T215 181 aa8.44□□□□□ -1.06
LINC00534-204ENST00000524361 NFATC2IPQ8NCF5 419 aa8.44□□□□□ -1.06
LINC00534-204ENST00000524361 ARHGEF1Q92888 912 aaKnown RBP8.44□□□□□ -1.06
LINC00534-204ENST00000524361 IGSF1Q8N6C5 1336 aa8.44□□□□□ -1.06
LINC00534-204ENST00000524361 ERVV-2B6SEH9 535 aa8.43□□□□□ -1.06
LINC00534-204ENST00000524361 GIGYF1O75420 1035 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms