RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 STAG1Q8WVM7 1258 aa5.49□□□□□ -1.53
SKP1-209ENST00000522552 MRFAP1L1Q96HT8 127 aa5.49□□□□□ -1.53
SKP1-209ENST00000522552 PRKD2Q9BZL6 878 aa5.49□□□□□ -1.53
SKP1-209ENST00000522552 G3BP2Q9UN86 482 aaKnown RBP5.49□□□□□ -1.53
SKP1-209ENST00000522552 RBM19Q9Y4C8 960 aaKnown RBP5.49□□□□□ -1.53
SKP1-209ENST00000522552 ENPP3O14638 875 aa5.48□□□□□ -1.53
SKP1-209ENST00000522552 ACTN4O43707 911 aaKnown RBP5.48□□□□□ -1.53
SKP1-209ENST00000522552 WEE1P30291 646 aa5.48□□□□□ -1.53
SKP1-209ENST00000522552 GTF2IP78347 998 aa5.48□□□□□ -1.53
SKP1-209ENST00000522552 KCNC4Q03721 635 aa5.48□□□□□ -1.53
SKP1-209ENST00000522552 GRIPAP1Q4V328 841 aa5.48□□□□□ -1.53
SKP1-209ENST00000522552 TMC1Q8TDI8 760 aa5.48□□□□□ -1.53
SKP1-209ENST00000522552 SETDB2Q96T68 719 aa5.48□□□□□ -1.53
SKP1-209ENST00000522552 HINFPQ9BQA5 517 aa5.48□□□□□ -1.53
SKP1-209ENST00000522552 PRR14Q9BWN1 585 aa5.48□□□□□ -1.53
SKP1-209ENST00000522552 DDX56Q9NY93 547 aaKnown RBP5.48□□□□□ -1.53
SKP1-209ENST00000522552 K7ELQ4 463 aaPredicted RBP5.47□□□□□ -1.53
SKP1-209ENST00000522552 TLL1O43897 1013 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 DNAJC6O75061 913 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 IGHA2P01877 340 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 HSP90AB4PQ58FF6 505 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 TEX2Q8IWB9 1127 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 ZNF654Q8IZM8 581 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 CYLDQ9NQC7 956 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 PCDHB9Q9Y5E1 797 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 EIF3JO75822 258 aaKnown RBP5.47□□□□□ -1.53
SKP1-209ENST00000522552 ITGBL1O95965 494 aaPredicted RBP5.47□□□□□ -1.53
SKP1-209ENST00000522552 S100BP04271 92 aaPredicted RBP5.47□□□□□ -1.53
SKP1-209ENST00000522552 CENPBP07199 599 aaPredicted RBP5.47□□□□□ -1.53
SKP1-209ENST00000522552 MPSTP25325 297 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 VPS37DQ86XT2 251 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 CCDC146Q8IYE0 955 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 NKX2-3Q8TAU0 364 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 DMRTB1Q96MA1 342 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 OCSTAMPQ9BR26 566 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.47□□□□□ -1.53
SKP1-209ENST00000522552 IL21Q9HBE4 155 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 SPC25Q9HBM1 224 aa5.47□□□□□ -1.53
SKP1-209ENST00000522552 CREB3O43889 395 aa5.46□□□□□ -1.54
SKP1-209ENST00000522552 ATP2B2Q01814 1243 aa5.46□□□□□ -1.54
SKP1-209ENST00000522552 RALBP1Q15311 655 aa5.46□□□□□ -1.54
SKP1-209ENST00000522552 EVI5LQ96CN4 794 aa5.46□□□□□ -1.54
SKP1-209ENST00000522552 CITED4Q96RK1 184 aa5.46□□□□□ -1.54
SKP1-209ENST00000522552 SPOCK3Q9BQ16 436 aa5.46□□□□□ -1.54
SKP1-209ENST00000522552 GPR182O15218 404 aa5.45□□□□□ -1.54
SKP1-209ENST00000522552 ZPR1O75312 459 aa5.45□□□□□ -1.54
SKP1-209ENST00000522552 F12P00748 615 aaPredicted RBP5.45□□□□□ -1.54
SKP1-209ENST00000522552 SERINC3Q13530 473 aa5.45□□□□□ -1.54
SKP1-209ENST00000522552 SPTY2D1Q68D10 685 aaPredicted RBP5.45□□□□□ -1.54
SKP1-209ENST00000522552 USP48Q86UV5 1035 aa5.45□□□□□ -1.54
SKP1-209ENST00000522552 GAS2L2Q8NHY3 880 aa5.45□□□□□ -1.54
SKP1-209ENST00000522552 COL26A1Q96A83 441 aa5.45□□□□□ -1.54
SKP1-209ENST00000522552 SRA1Q9HD15 236 aaKnown RBP5.45□□□□□ -1.54
SKP1-209ENST00000522552 PRR12Q9ULL5 1215 aa5.45□□□□□ -1.54
SKP1-209ENST00000522552 DOLKQ9UPQ8 538 aa5.45□□□□□ -1.54
SKP1-209ENST00000522552 CTSHP09668 335 aa5.44□□□□□ -1.54
SKP1-209ENST00000522552 ATF4P18848 351 aaPredicted RBP5.44□□□□□ -1.54
SKP1-209ENST00000522552 ATP6V1AP38606 617 aa5.44□□□□□ -1.54
SKP1-209ENST00000522552 TBX4P57082 545 aa5.44□□□□□ -1.54
SKP1-209ENST00000522552 AMPD3Q01432 767 aa5.44□□□□□ -1.54
SKP1-209ENST00000522552 OXLD1Q5BKU9 147 aa5.44□□□□□ -1.54
SKP1-209ENST00000522552 FMNL3Q8IVF7 1028 aa5.44□□□□□ -1.54
SKP1-209ENST00000522552 CCAR1Q8IX12 1150 aaKnown RBP5.44□□□□□ -1.54
SKP1-209ENST00000522552 TSEN2Q8NCE0 465 aaKnown RBP5.44□□□□□ -1.54
SKP1-209ENST00000522552 CRELD1Q96HD1 420 aa5.44□□□□□ -1.54
SKP1-209ENST00000522552 RNPC3Q96LT9 517 aaKnown RBP5.44□□□□□ -1.54
SKP1-209ENST00000522552 CCDC85AQ96PX6 553 aaPredicted RBP5.44□□□□□ -1.54
SKP1-209ENST00000522552 CCDC87Q9NVE4 849 aa5.44□□□□□ -1.54
SKP1-209ENST00000522552 MAP10Q9P2G4 905 aa5.44□□□□□ -1.54
SKP1-209ENST00000522552 PCDHGA11Q9Y5H2 935 aa5.44□□□□□ -1.54
SKP1-209ENST00000522552 FZD6O60353 706 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 GNA15P30679 374 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 GJA8P48165 433 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 MORN1Q5T089 497 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 SCUBE3Q8IX30 993 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 CKAP2LQ8IYA6 745 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 ALKBH8Q96BT7 664 aaKnown RBP5.43□□□□□ -1.54
SKP1-209ENST00000522552 FAM129BQ96TA1 746 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 UBA5Q9GZZ9 404 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 SLC27A5Q9Y2P5 690 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 GPSM3Q9Y4H4 160 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 PPFIA4O75335 1185 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 NR1I2O75469 434 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 PTK2Q05397 1052 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 ENOX2Q16206 610 aaKnown RBP5.43□□□□□ -1.54
SKP1-209ENST00000522552 PLEKHG4Q58EX7 1191 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 NBPF6Q5VWK0 638 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 JDP2Q8WYK2 163 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 NBPF4Q96M43 638 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 PRKAB1Q9Y478 270 aa5.43□□□□□ -1.54
SKP1-209ENST00000522552 PNMA6FA0A0J9YX94 578 aa5.42□□□□□ -1.54
SKP1-209ENST00000522552 PDGFRBP09619 1106 aa5.42□□□□□ -1.54
SKP1-209ENST00000522552 MKL1Q969V6 931 aa5.42□□□□□ -1.54
SKP1-209ENST00000522552 SGSM3Q96HU1 749 aa5.42□□□□□ -1.54
SKP1-209ENST00000522552 TERF2IPQ9NYB0 399 aa5.42□□□□□ -1.54
SKP1-209ENST00000522552 A0A0G2JS52 829 aa5.41□□□□□ -1.54
SKP1-209ENST00000522552 PPP1R12AO14974 1030 aaPredicted RBP5.41□□□□□ -1.54
SKP1-209ENST00000522552 EIF1AXP47813 144 aaKnown RBP5.41□□□□□ -1.54
SKP1-209ENST00000522552 RHBDL3P58872 404 aa5.41□□□□□ -1.54
SKP1-209ENST00000522552 PTPN12Q05209 780 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms