RNA–Protein interactions for RNA: ENST00000519655.6

AF117829.1-201, humanhuman

TSL 5 BASIC

Gene AF117829.1, Length 1,398 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF117829.1-201ENST00000519655 EIF4A1P60842 406 aaKnown RBP28.92■■■□□ 2.22
AF117829.1-201ENST00000519655 CCDC27Q2M243 656 aa28.92■■■□□ 2.22
AF117829.1-201ENST00000519655 RPS6KA4O75676 772 aa28.91■■■□□ 2.22
AF117829.1-201ENST00000519655 INTS5Q6P9B9 1019 aaKnown RBP28.91■■■□□ 2.22
AF117829.1-201ENST00000519655 SALL2Q9Y467 1007 aaPredicted RBP28.91■■■□□ 2.22
AF117829.1-201ENST00000519655 PRAMEF22A3QJZ6 481 aa28.9■■■□□ 2.22
AF117829.1-201ENST00000519655 CHL1O00533 1208 aa28.9■■■□□ 2.22
AF117829.1-201ENST00000519655 NCBP3Q53F19 620 aaKnown RBP28.9■■■□□ 2.22
AF117829.1-201ENST00000519655 CFAP44Q96MT7 982 aa28.9■■■□□ 2.22
AF117829.1-201ENST00000519655 COL24A1Q17RW2 1714 aa28.9■■■□□ 2.22
AF117829.1-201ENST00000519655 WWC1Q8IX03 1113 aa28.89■■■□□ 2.22
AF117829.1-201ENST00000519655 SLC16A10Q8TF71 515 aa28.89■■■□□ 2.22
AF117829.1-201ENST00000519655 ZBTB1Q9Y2K1 713 aa28.89■■■□□ 2.22
AF117829.1-201ENST00000519655 MTFR1LQ9H019 292 aa28.88■■■□□ 2.21
AF117829.1-201ENST00000519655 USP16Q9Y5T5 823 aa28.88■■■□□ 2.21
AF117829.1-201ENST00000519655 SPON1Q9HCB6 807 aa28.88■■■□□ 2.21
AF117829.1-201ENST00000519655 IFT57Q9NWB7 429 aa28.88■■■□□ 2.21
AF117829.1-201ENST00000519655 ADRA2BP18089 450 aa28.87■■■□□ 2.21
AF117829.1-201ENST00000519655 GNAI1P63096 354 aa28.87■■■□□ 2.21
AF117829.1-201ENST00000519655 TRAPPC3LQ5T215 181 aa28.87■■■□□ 2.21
AF117829.1-201ENST00000519655 ATF5Q9Y2D1 282 aaPredicted RBP28.87■■■□□ 2.21
AF117829.1-201ENST00000519655 GIGYF1O75420 1035 aaPredicted RBP28.86■■■□□ 2.21
AF117829.1-201ENST00000519655 ZNF853P0CG23 659 aa28.86■■■□□ 2.21
AF117829.1-201ENST00000519655 CANXP27824 592 aaKnown RBP28.86■■■□□ 2.21
AF117829.1-201ENST00000519655 SOS1Q07889 1333 aaPredicted RBP28.85■■■□□ 2.21
AF117829.1-201ENST00000519655 MBIPQ9NS73 344 aa28.85■■■□□ 2.21
AF117829.1-201ENST00000519655 NGEFQ8N5V2 710 aa28.84■■■□□ 2.21
AF117829.1-201ENST00000519655 ARHGEF1Q92888 912 aaKnown RBP28.84■■■□□ 2.21
AF117829.1-201ENST00000519655 COL15A1P39059 1388 aa28.83■■■□□ 2.21
AF117829.1-201ENST00000519655 A1BGP04217 495 aa28.83■■■□□ 2.21
AF117829.1-201ENST00000519655 RFC4P35249 363 aa28.82■■■□□ 2.2
AF117829.1-201ENST00000519655 MSL1Q68DK7 614 aa28.81■■■□□ 2.2
AF117829.1-201ENST00000519655 ZNF330Q9Y3S2 320 aaPredicted RBP28.8■■■□□ 2.2
AF117829.1-201ENST00000519655 IL16Q14005 1332 aa28.79■■■□□ 2.2
AF117829.1-201ENST00000519655 PIP4K2AP48426 406 aaPredicted RBP28.79■■■□□ 2.2
AF117829.1-201ENST00000519655 KRT24Q2M2I5 525 aa28.79■■■□□ 2.2
AF117829.1-201ENST00000519655 PTGER2P43116 358 aa28.78■■■□□ 2.2
AF117829.1-201ENST00000519655 WDR63Q8IWG1 891 aa28.78■■■□□ 2.2
AF117829.1-201ENST00000519655 IL6STP40189 918 aaPredicted RBP28.77■■■□□ 2.2
AF117829.1-201ENST00000519655 EIF5P55010 431 aaKnown RBP28.77■■■□□ 2.2
AF117829.1-201ENST00000519655 SCN7AQ01118 1682 aa28.77■■■□□ 2.2
AF117829.1-201ENST00000519655 BCORQ6W2J9 1755 aa28.76■■■□□ 2.19
AF117829.1-201ENST00000519655 USP42Q9H9J4 1324 aaKnown RBP28.76■■■□□ 2.19
AF117829.1-201ENST00000519655 NPM2Q86SE8 214 aaKnown RBP28.75■■■□□ 2.19
AF117829.1-201ENST00000519655 TSR2Q969E8 191 aaKnown RBP28.75■■■□□ 2.19
AF117829.1-201ENST00000519655 SGIP1Q9BQI5 828 aa28.75■■■□□ 2.19
AF117829.1-201ENST00000519655 SRP68Q9UHB9 627 aaKnown RBP28.75■■■□□ 2.19
AF117829.1-201ENST00000519655 EIF2S2P20042 333 aaKnown RBP28.75■■■□□ 2.19
AF117829.1-201ENST00000519655 POLD1P28340 1107 aa28.75■■■□□ 2.19
AF117829.1-201ENST00000519655 A0A087WZG4 1122 aa28.74■■■□□ 2.19
AF117829.1-201ENST00000519655 NBPF26B4DH59 902 aa28.74■■■□□ 2.19
AF117829.1-201ENST00000519655 ZPR1O75312 459 aa28.74■■■□□ 2.19
AF117829.1-201ENST00000519655 NBPF10Q6P3W6 841 aaKnown RBP28.74■■■□□ 2.19
AF117829.1-201ENST00000519655 NBPF15Q8N660 670 aa28.74■■■□□ 2.19
AF117829.1-201ENST00000519655 PPP1R1BQ9UD71 204 aaPredicted RBP28.74■■■□□ 2.19
AF117829.1-201ENST00000519655 GYS1P13807 737 aa28.73■■■□□ 2.19
AF117829.1-201ENST00000519655 HOXB7P09629 217 aa28.72■■■□□ 2.19
AF117829.1-201ENST00000519655 DUSP27Q5VZP5 1158 aa28.72■■■□□ 2.19
AF117829.1-201ENST00000519655 NARFQ9UHQ1 456 aa28.72■■■□□ 2.19
AF117829.1-201ENST00000519655 ZNF521Q96K83 1311 aa28.71■■■□□ 2.19
AF117829.1-201ENST00000519655 USPL1Q5W0Q7 1092 aa28.71■■■□□ 2.19
AF117829.1-201ENST00000519655 NECTIN2Q92692 538 aa28.71■■■□□ 2.19
AF117829.1-201ENST00000519655 ARXQ96QS3 562 aa28.71■■■□□ 2.19
AF117829.1-201ENST00000519655 ERBB4Q15303 1308 aa28.7■■■□□ 2.19
AF117829.1-201ENST00000519655 FANCIQ9NVI1 1328 aa28.7■■■□□ 2.18
AF117829.1-201ENST00000519655 NLGN1Q8N2Q7 840 aa28.69■■■□□ 2.18
AF117829.1-201ENST00000519655 TBC1D2BQ9UPU7 963 aa28.69■■■□□ 2.18
AF117829.1-201ENST00000519655 ELL2O00472 640 aaPredicted RBP28.68■■■□□ 2.18
AF117829.1-201ENST00000519655 MYL6BP14649 208 aa28.68■■■□□ 2.18
AF117829.1-201ENST00000519655 HDGFL1Q5TGJ6 251 aa28.68■■■□□ 2.18
AF117829.1-201ENST00000519655 C8orf58Q8NAV2 365 aa28.68■■■□□ 2.18
AF117829.1-201ENST00000519655 DZIP3Q86Y13 1208 aaKnown RBP28.67■■■□□ 2.18
AF117829.1-201ENST00000519655 SPINK5Q9NQ38 1064 aaPredicted RBP28.67■■■□□ 2.18
AF117829.1-201ENST00000519655 FKBP8Q14318 412 aa28.66■■■□□ 2.18
AF117829.1-201ENST00000519655 NUP98P52948 1817 aa28.66■■■□□ 2.18
AF117829.1-201ENST00000519655 MYH16Q9H6N6 1097 aa28.65■■■□□ 2.18
AF117829.1-201ENST00000519655 SRCAPQ6ZRS2 3230 aa28.65■■■□□ 2.18
AF117829.1-201ENST00000519655 MMP10P09238 476 aa28.64■■■□□ 2.18
AF117829.1-201ENST00000519655 ANXA1P04083 346 aa28.63■■■□□ 2.17
AF117829.1-201ENST00000519655 PDIA6Q15084 440 aa28.63■■■□□ 2.17
AF117829.1-201ENST00000519655 TSPYL6Q8N831 410 aa28.63■■■□□ 2.17
AF117829.1-201ENST00000519655 BCL2L12Q9HB09 334 aa28.63■■■□□ 2.17
AF117829.1-201ENST00000519655 AFDNP55196 1824 aaKnown RBP28.63■■■□□ 2.17
AF117829.1-201ENST00000519655 CAMTA2O94983 1202 aa28.62■■■□□ 2.17
AF117829.1-201ENST00000519655 GOLGA2Q08379 1002 aa28.62■■■□□ 2.17
AF117829.1-201ENST00000519655 PROSER3Q2NL68 480 aa28.62■■■□□ 2.17
AF117829.1-201ENST00000519655 CHPF2Q9P2E5 772 aa28.62■■■□□ 2.17
AF117829.1-201ENST00000519655 CACNA1FO60840 1977 aa28.61■■■□□ 2.17
AF117829.1-201ENST00000519655 DDX21Q9NR30 783 aaKnown RBP eCLIP28.61■■■□□ 2.17
AF117829.1-201ENST00000519655 TWISTNBQ3B726 338 aaPredicted RBP28.6■■■□□ 2.17
AF117829.1-201ENST00000519655 KLHL34Q8N239 644 aa28.6■■■□□ 2.17
AF117829.1-201ENST00000519655 HNRNPUQ00839 825 aaKnown RBP eCLIP28.59■■■□□ 2.17
AF117829.1-201ENST00000519655 EXOSC9Q06265 439 aaKnown RBP28.59■■■□□ 2.17
AF117829.1-201ENST00000519655 LRP10Q7Z4F1 713 aa28.59■■■□□ 2.17
AF117829.1-201ENST00000519655 FHDC1Q9C0D6 1143 aaPredicted RBP28.59■■■□□ 2.17
AF117829.1-201ENST00000519655 DBF4Q9UBU7 674 aaPredicted RBP28.59■■■□□ 2.17
AF117829.1-201ENST00000519655 PARP3Q9Y6F1 533 aa28.59■■■□□ 2.17
AF117829.1-201ENST00000519655 KIF6Q6ZMV9 814 aa28.58■■■□□ 2.17
AF117829.1-201ENST00000519655 TTLL7Q6ZT98 887 aa28.58■■■□□ 2.17
AF117829.1-201ENST00000519655 KIF13BQ9NQT8 1826 aa28.58■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms