RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 RHPN1Q8TCX5 695 aa13.73□□□□□ -0.21
NUDCD1-203ENST00000519607 FOXD4L4Q8WXT5 416 aaPredicted RBP13.73□□□□□ -0.21
NUDCD1-203ENST00000519607 RBSNQ9H1K0 784 aa13.73□□□□□ -0.21
NUDCD1-203ENST00000519607 SRGAP3O43295 1099 aa13.73□□□□□ -0.21
NUDCD1-203ENST00000519607 HSPA4P34932 840 aa13.73□□□□□ -0.21
NUDCD1-203ENST00000519607 PHAXQ9H814 394 aaKnown RBP13.73□□□□□ -0.21
NUDCD1-203ENST00000519607 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
NUDCD1-203ENST00000519607 WDR33Q9C0J8 1336 aaKnown RBP13.73□□□□□ -0.21
NUDCD1-203ENST00000519607 PHF14O94880 888 aa13.72□□□□□ -0.21
NUDCD1-203ENST00000519607 EIF2S2P20042 333 aaKnown RBP13.72□□□□□ -0.21
NUDCD1-203ENST00000519607 NOL8Q76FK4 1167 aaKnown RBP13.72□□□□□ -0.21
NUDCD1-203ENST00000519607 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
NUDCD1-203ENST00000519607 MARF1Q9Y4F3 1742 aaKnown RBP13.72□□□□□ -0.21
NUDCD1-203ENST00000519607 LTN1O94822 1766 aa13.72□□□□□ -0.21
NUDCD1-203ENST00000519607 SYCE3A1L190 88 aa13.71□□□□□ -0.21
NUDCD1-203ENST00000519607 UNC5CLQ8IV45 518 aa13.71□□□□□ -0.21
NUDCD1-203ENST00000519607 TMEM63CQ9P1W3 806 aa13.71□□□□□ -0.21
NUDCD1-203ENST00000519607 RBM27Q9P2N5 1060 aaKnown RBP13.71□□□□□ -0.21
NUDCD1-203ENST00000519607 CEMIPQ8WUJ3 1361 aa13.71□□□□□ -0.21
NUDCD1-203ENST00000519607 SETD1BQ9UPS6 1966 aaKnown RBP13.71□□□□□ -0.21
NUDCD1-203ENST00000519607 DNAAF4Q8WXU2 420 aa13.71□□□□□ -0.21
NUDCD1-203ENST00000519607 IP6K1Q92551 441 aa13.71□□□□□ -0.21
NUDCD1-203ENST00000519607 UPF3BQ9BZI7 483 aaKnown RBP13.71□□□□□ -0.21
NUDCD1-203ENST00000519607 TPM2P07951 284 aa13.7□□□□□ -0.22
NUDCD1-203ENST00000519607 PDLIM2Q96JY6 352 aa13.7□□□□□ -0.22
NUDCD1-203ENST00000519607 SGSM2O43147 1006 aa13.7□□□□□ -0.22
NUDCD1-203ENST00000519607 KCNA6P17658 529 aa13.7□□□□□ -0.22
NUDCD1-203ENST00000519607 EIF4A1P60842 406 aaKnown RBP13.7□□□□□ -0.22
NUDCD1-203ENST00000519607 TEFQ10587 303 aa13.7□□□□□ -0.22
NUDCD1-203ENST00000519607 OS9Q13438 667 aaPredicted RBP13.7□□□□□ -0.22
NUDCD1-203ENST00000519607 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.7□□□□□ -0.22
NUDCD1-203ENST00000519607 RUFY2Q8WXA3 655 aa13.7□□□□□ -0.22
NUDCD1-203ENST00000519607 TTC41PQ6P2S7 1318 aa13.69□□□□□ -0.22
NUDCD1-203ENST00000519607 RAD50Q92878 1312 aa13.69□□□□□ -0.22
NUDCD1-203ENST00000519607 PI4K2BQ8TCG2 481 aa13.69□□□□□ -0.22
NUDCD1-203ENST00000519607 FER1L4A9Z1Z3 1794 aa13.69□□□□□ -0.22
NUDCD1-203ENST00000519607 PI4KAP2A4QPH2 592 aa13.69□□□□□ -0.22
NUDCD1-203ENST00000519607 GLRX3O76003 335 aaKnown RBP13.69□□□□□ -0.22
NUDCD1-203ENST00000519607 USHBP1Q8N6Y0 703 aa13.69□□□□□ -0.22
NUDCD1-203ENST00000519607 PI4KAP1Q8N8J0 262 aa13.69□□□□□ -0.22
NUDCD1-203ENST00000519607 KCNH5Q8NCM2 988 aa13.69□□□□□ -0.22
NUDCD1-203ENST00000519607 GPATCH3Q96I76 525 aa13.69□□□□□ -0.22
NUDCD1-203ENST00000519607 NOL7Q9UMY1 257 aaKnown RBP13.69□□□□□ -0.22
NUDCD1-203ENST00000519607 PHF8Q9UPP1 1060 aa13.69□□□□□ -0.22
NUDCD1-203ENST00000519607 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.69□□□□□ -0.22
NUDCD1-203ENST00000519607 MCM5P33992 734 aa13.68□□□□□ -0.22
NUDCD1-203ENST00000519607 BEND3Q5T5X7 828 aa13.68□□□□□ -0.22
NUDCD1-203ENST00000519607 TSPY26PQ9H489 355 aa13.68□□□□□ -0.22
NUDCD1-203ENST00000519607 CHPF2Q9P2E5 772 aa13.68□□□□□ -0.22
NUDCD1-203ENST00000519607 KDM3BQ7LBC6 1761 aa13.68□□□□□ -0.22
NUDCD1-203ENST00000519607 BTBD11A6QL63 1104 aa13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 NBPF7P0C2Y1 421 aaPredicted RBP13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 PLEKHO1Q53GL0 409 aaPredicted RBP13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 CLASRPQ8N2M8 674 aaKnown RBP13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 DBF4Q9UBU7 674 aaPredicted RBP13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 ATP6V1DQ9Y5K8 247 aa13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 TCHHQ07283 1943 aa13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 OFD1O75665 1012 aa13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 MAP4K4O95819 1239 aaPredicted RBP13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 AKAP4Q5JQC9 854 aa13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 ERC1Q8IUD2 1116 aa13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 DIAPH3Q9NSV4 1193 aa13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 CCDC39Q9UFE4 941 aa13.67□□□□□ -0.22
NUDCD1-203ENST00000519607 RRP9O43818 475 aaKnown RBP13.66□□□□□ -0.22
NUDCD1-203ENST00000519607 HSP90AA2PQ14568 343 aaPredicted RBP13.66□□□□□ -0.22
NUDCD1-203ENST00000519607 GLIPR1L2Q4G1C9 344 aa13.66□□□□□ -0.22
NUDCD1-203ENST00000519607 AMOTQ4VCS5 1084 aa13.66□□□□□ -0.22
NUDCD1-203ENST00000519607 NSFL1CQ9UNZ2 370 aaKnown RBP13.66□□□□□ -0.22
NUDCD1-203ENST00000519607 LIMCH1Q9UPQ0 1083 aa13.66□□□□□ -0.22
NUDCD1-203ENST00000519607 SNX14Q9Y5W7 946 aa13.66□□□□□ -0.22
NUDCD1-203ENST00000519607 ADGRL3Q9HAR2 1447 aa13.66□□□□□ -0.22
NUDCD1-203ENST00000519607 CHAMP1Q96JM3 812 aa13.66□□□□□ -0.22
NUDCD1-203ENST00000519607 LGR6Q9HBX8 967 aa13.66□□□□□ -0.22
NUDCD1-203ENST00000519607 C9orf78Q9NZ63 289 aaPredicted RBP13.66□□□□□ -0.22
NUDCD1-203ENST00000519607 USP42Q9H9J4 1324 aaKnown RBP13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 ALDH1L1O75891 902 aa13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 LETM1O95202 739 aaPredicted RBP13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 TERF1P54274 439 aa13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 PSME1Q06323 249 aa13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 NBPF6Q5VWK0 638 aa13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 CWC27Q6UX04 472 aaKnown RBP13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 FAM184AQ8NB25 1140 aa13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 NBPF4Q96M43 638 aa13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 LSG1Q9H089 658 aaKnown RBP13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 MED1Q15648 1581 aaPredicted RBP13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 ZNF500O60304 480 aaPredicted RBP13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 MTX1Q13505 466 aa13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 CSPP1Q1MSJ5 1256 aa13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 C1orf141Q5JVX7 400 aa13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 ZNF530Q6P9A1 599 aaPredicted RBP13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 USP48Q86UV5 1035 aa13.65□□□□□ -0.22
NUDCD1-203ENST00000519607 LMO7Q8WWI1 1683 aa13.64□□□□□ -0.23
NUDCD1-203ENST00000519607 PRKCSHP14314 528 aaPredicted RBP13.64□□□□□ -0.23
NUDCD1-203ENST00000519607 UBE2Q2Q8WVN8 375 aa13.64□□□□□ -0.23
NUDCD1-203ENST00000519607 IL25Q9H293 177 aa13.64□□□□□ -0.23
NUDCD1-203ENST00000519607 SMC3Q9UQE7 1217 aa13.64□□□□□ -0.23
NUDCD1-203ENST00000519607 IFIT2P09913 472 aaKnown RBP13.64□□□□□ -0.23
NUDCD1-203ENST00000519607 TMEM87AQ8NBN3 555 aa13.64□□□□□ -0.23
NUDCD1-203ENST00000519607 TTC14Q96N46 770 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms