RNA–Protein interactions for RNA: ENST00000515629.5

SLC38A9-223, Transcript of solute carrier family 38 member 9, human

TSL 2 BASIC

Gene SLC38A9, Length 2,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-223	ENST00000515629	ZMIZ1	Q9ULJ6	1067 aa		5.31	□□□□□ -1.56
SLC38A9-223	ENST00000515629	EID1	Q9Y6B2	187 aa		5.31	□□□□□ -1.56
SLC38A9-223	ENST00000515629	KIF15	Q9NS87	1388 aa		5.31	□□□□□ -1.56
SLC38A9-223	ENST00000515629	SSTR3	P32745	418 aa	Predicted RBP	5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	VAC14	Q08AM6	782 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	HIC1	Q14526	733 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	RRP7BP	Q9NSQ0	103 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	BSDC1	Q9NW68	430 aa	Predicted RBP	5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	FRMD4B	Q9Y2L6	1034 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	PRDM15	P57071	1507 aa	Predicted RBP	5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	TMEM2	Q9UHN6	1383 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	XIRP1	Q702N8	1843 aa	Known RBP	5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	FAM135B	Q49AJ0	1406 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	SCAMP3	O14828	347 aa	Known RBP	5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	IDI1	Q13907	227 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	MAP9	Q49MG5	647 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	RBM33	Q96EV2	1170 aa	Known RBP	5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	IL17RA	Q96F46	866 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	KLF15	Q9UIH9	416 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	TMEM94	Q12767	1356 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	ABCC5	O15440	1437 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	ODR4	Q5SWX8	454 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	PPP1R18	Q6NYC8	613 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	C1orf131	Q8NDD1	294 aa	Known RBP	5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	SLC26A8	Q96RN1	970 aa		5.3	□□□□□ -1.56
SLC38A9-223	ENST00000515629	ERBIN	Q96RT1	1412 aa		5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	PIK3C2B	O00750	1634 aa		5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	DHX8	Q14562	1220 aa	Known RBP	5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	PDIA6	Q15084	440 aa		5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	ZNF746	Q6NUN9	644 aa	Predicted RBP	5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	POTEA	Q6S8J7	498 aa		5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	ATL2	Q8NHH9	583 aa		5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	TSC1	Q92574	1164 aa		5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	JADE2	Q9NQC1	790 aa		5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	CTDP1	Q9Y5B0	961 aa	Predicted RBP	5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	MAFB	Q9Y5Q3	323 aa	Predicted RBP	5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	MAP3K1	Q13233	1512 aa		5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	TTC36	A6NLP5	189 aa		5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	GIGYF1	O75420	1035 aa	Predicted RBP	5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	KCNA6	P17658	529 aa		5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	COPB2	P35606	906 aa		5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	SAFB2	Q14151	953 aa	Known RBP eCLIP	5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	PDILT	Q8N807	584 aa		5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	ZNF512B	Q96KM6	892 aa	Predicted RBP	5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	PAGR1	Q9BTK6	254 aa		5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	INO80B	Q9C086	356 aa	Predicted RBP	5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	TTF2	Q9UNY4	1162 aa	Known RBP	5.29	□□□□□ -1.56
SLC38A9-223	ENST00000515629	GOLGA6C	A6NDK9	693 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	GOLGA6B	A6NDN3	693 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	GOLGA6D	P0CG33	693 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	TMEM259	Q4ZIN3	620 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	TSR2	Q969E8	191 aa	Known RBP	5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	ACBD3	Q9H3P7	528 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	PRM3	Q9NNZ6	103 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	GPCPD1	Q9NPB8	672 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	GOLGA6A	Q9NYA3	693 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	MKRN1	Q9UHC7	482 aa	Known RBP	5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	SH3BP1	Q9Y3L3	701 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	EFCAB6	Q5THR3	1501 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	KANK1	Q14678	1352 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	HSD3B2	P26439	372 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	XPC	Q01831	940 aa	Predicted RBP	5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	WDR75	Q8IWA0	830 aa	Known RBP	5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	BRINP2	Q9C0B6	783 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	OSBPL2	Q9H1P3	480 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	SLAIN2	Q9P270	581 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	CHIC2	Q9UKJ5	165 aa		5.28	□□□□□ -1.56
SLC38A9-223	ENST00000515629	TET3	O43151	1660 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	LDHA	P00338	332 aa	Known RBP	5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	CD53	P19397	219 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	CLCN1	P35523	988 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	LDLRAD1	Q5T700	205 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	ICE2	Q659A1	982 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	METTL16	Q86W50	562 aa	Known RBP	5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	FAM161B	Q96MY7	647 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	CCSER2	Q9H7U1	834 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	DAPK1	P53355	1430 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	NOS1	P29475	1434 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	NBPF11	Q86T75	865 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	NLRP7	Q8WX94	980 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	PHOX2B	Q99453	314 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	NAP1L4	Q99733	375 aa	Known RBP	5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	EMILIN3	Q9NT22	766 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	LIMD1	Q9UGP4	676 aa		5.27	□□□□□ -1.57
SLC38A9-223	ENST00000515629	ROBO1	Q9Y6N7	1651 aa		5.26	□□□□□ -1.57
SLC38A9-223	ENST00000515629	LMTK2	Q8IWU2	1503 aa		5.26	□□□□□ -1.57
SLC38A9-223	ENST00000515629	CSPP1	Q1MSJ5	1256 aa		5.26	□□□□□ -1.57
SLC38A9-223	ENST00000515629	NBPF1	Q3BBV0	1214 aa		5.26	□□□□□ -1.57
SLC38A9-223	ENST00000515629	TTC39B	Q5VTQ0	682 aa	Predicted RBP	5.26	□□□□□ -1.57
SLC38A9-223	ENST00000515629	TTC30B	Q8N4P2	665 aa		5.26	□□□□□ -1.57
SLC38A9-223	ENST00000515629	TSPAN18	Q96SJ8	248 aa		5.26	□□□□□ -1.57
SLC38A9-223	ENST00000515629	QTRT2	Q9H974	415 aa	Known RBP	5.26	□□□□□ -1.57
SLC38A9-223	ENST00000515629	PTPN23	Q9H3S7	1636 aa		5.26	□□□□□ -1.57
SLC38A9-223	ENST00000515629	CROCC2	H7BZ55	1655 aa		5.26	□□□□□ -1.57
SLC38A9-223	ENST00000515629	ANKRD30A	Q9BXX3	1397 aa		5.26	□□□□□ -1.57
SLC38A9-223	ENST00000515629	FGD6	Q6ZV73	1430 aa		5.26	□□□□□ -1.57
SLC38A9-223	ENST00000515629	POU5F1	Q01860	360 aa	Known RBP	5.26	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms