RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 UBR3Q6ZT12 1888 aa12.78□□□□□ -0.36
RACK1-234ENST00000515417 SSFA2P28290 1259 aa12.78□□□□□ -0.36
RACK1-234ENST00000515417 RC3H1Q5TC82 1133 aaKnown RBP12.78□□□□□ -0.36
RACK1-234ENST00000515417 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
RACK1-234ENST00000515417 FMNL2Q96PY5 1086 aa12.78□□□□□ -0.36
RACK1-234ENST00000515417 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
RACK1-234ENST00000515417 ZBTB1Q9Y2K1 713 aa12.78□□□□□ -0.36
RACK1-234ENST00000515417 COL5A3P25940 1745 aaPredicted RBP12.78□□□□□ -0.36
RACK1-234ENST00000515417 COL24A1Q17RW2 1714 aa12.78□□□□□ -0.36
RACK1-234ENST00000515417 QSER1Q2KHR3 1735 aa12.78□□□□□ -0.36
RACK1-234ENST00000515417 UBR2Q8IWV8 1755 aa12.78□□□□□ -0.36
RACK1-234ENST00000515417 MYH14Q7Z406 1995 aaKnown RBP12.78□□□□□ -0.36
RACK1-234ENST00000515417 RPS6KA4O75676 772 aa12.77□□□□□ -0.37
RACK1-234ENST00000515417 PIP4K2AP48426 406 aaPredicted RBP12.77□□□□□ -0.37
RACK1-234ENST00000515417 FLAD1Q8NFF5 587 aa12.77□□□□□ -0.37
RACK1-234ENST00000515417 ZNF526Q8TF50 670 aaPredicted RBP12.77□□□□□ -0.37
RACK1-234ENST00000515417 ARHGEF1Q92888 912 aaKnown RBP12.77□□□□□ -0.37
RACK1-234ENST00000515417 SRP68Q9UHB9 627 aaKnown RBP12.77□□□□□ -0.37
RACK1-234ENST00000515417 ZNF831Q5JPB2 1677 aa12.77□□□□□ -0.37
RACK1-234ENST00000515417 CANXP27824 592 aaKnown RBP12.76□□□□□ -0.37
RACK1-234ENST00000515417 LMOD3Q0VAK6 560 aa12.76□□□□□ -0.37
RACK1-234ENST00000515417 TRAPPC3LQ5T215 181 aa12.76□□□□□ -0.37
RACK1-234ENST00000515417 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
RACK1-234ENST00000515417 SLC16A10Q8TF71 515 aa12.76□□□□□ -0.37
RACK1-234ENST00000515417 ZNF330Q9Y3S2 320 aaPredicted RBP12.76□□□□□ -0.37
RACK1-234ENST00000515417 LAS1LQ9Y4W2 734 aaKnown RBP12.76□□□□□ -0.37
RACK1-234ENST00000515417 SOS1Q07889 1333 aaPredicted RBP12.76□□□□□ -0.37
RACK1-234ENST00000515417 A1BGP04217 495 aa12.75□□□□□ -0.37
RACK1-234ENST00000515417 HMGB2P26583 209 aaKnown RBP12.75□□□□□ -0.37
RACK1-234ENST00000515417 FAM9BQ8IZU0 186 aa12.75□□□□□ -0.37
RACK1-234ENST00000515417 CICQ96RK0 1608 aaPredicted RBP12.75□□□□□ -0.37
RACK1-234ENST00000515417 TSPYL4Q9UJ04 414 aa12.75□□□□□ -0.37
RACK1-234ENST00000515417 USP16Q9Y5T5 823 aa12.75□□□□□ -0.37
RACK1-234ENST00000515417 ATP10DQ9P241 1426 aa12.74□□□□□ -0.37
RACK1-234ENST00000515417 STARD3NLO95772 234 aa12.74□□□□□ -0.37
RACK1-234ENST00000515417 RFC4P35249 363 aa12.74□□□□□ -0.37
RACK1-234ENST00000515417 EIF4A1P60842 406 aaKnown RBP12.74□□□□□ -0.37
RACK1-234ENST00000515417 COL15A1P39059 1388 aa12.73□□□□□ -0.37
RACK1-234ENST00000515417 SNRPA1P09661 255 aaKnown RBP12.73□□□□□ -0.37
RACK1-234ENST00000515417 ADRA2BP18089 450 aa12.73□□□□□ -0.37
RACK1-234ENST00000515417 SALL2Q9Y467 1007 aaPredicted RBP12.73□□□□□ -0.37
RACK1-234ENST00000515417 GYS1P13807 737 aa12.72□□□□□ -0.37
RACK1-234ENST00000515417 KRT24Q2M2I5 525 aa12.72□□□□□ -0.37
RACK1-234ENST00000515417 KDM3BQ7LBC6 1761 aa12.71□□□□□ -0.37
RACK1-234ENST00000515417 USP42Q9H9J4 1324 aaKnown RBP12.71□□□□□ -0.37
RACK1-234ENST00000515417 MMP10P09238 476 aa12.71□□□□□ -0.37
RACK1-234ENST00000515417 FKBP8Q14318 412 aa12.71□□□□□ -0.37
RACK1-234ENST00000515417 USPL1Q5W0Q7 1092 aa12.71□□□□□ -0.37
RACK1-234ENST00000515417 TEX13AQ9BXU3 409 aaPredicted RBP12.71□□□□□ -0.37
RACK1-234ENST00000515417 C4AP0C0L4 1744 aa12.71□□□□□ -0.38
RACK1-234ENST00000515417 NBPF26B4DH59 902 aa12.7□□□□□ -0.38
RACK1-234ENST00000515417 CHL1O00533 1208 aa12.7□□□□□ -0.38
RACK1-234ENST00000515417 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
RACK1-234ENST00000515417 DIEXFQ68CQ4 756 aaKnown RBP12.7□□□□□ -0.38
RACK1-234ENST00000515417 NBPF10Q6P3W6 841 aaKnown RBP12.7□□□□□ -0.38
RACK1-234ENST00000515417 NBPF15Q8N660 670 aa12.7□□□□□ -0.38
RACK1-234ENST00000515417 NECTIN2Q92692 538 aa12.7□□□□□ -0.38
RACK1-234ENST00000515417 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
RACK1-234ENST00000515417 ZPR1O75312 459 aa12.69□□□□□ -0.38
RACK1-234ENST00000515417 MBIPQ9NS73 344 aa12.69□□□□□ -0.38
RACK1-234ENST00000515417 GRIN3BO60391 1043 aa12.68□□□□□ -0.38
RACK1-234ENST00000515417 EIF2S2P20042 333 aaKnown RBP12.68□□□□□ -0.38
RACK1-234ENST00000515417 DDR1Q08345 913 aa12.68□□□□□ -0.38
RACK1-234ENST00000515417 NGEFQ8N5V2 710 aa12.68□□□□□ -0.38
RACK1-234ENST00000515417 BCL2L12Q9HB09 334 aa12.68□□□□□ -0.38
RACK1-234ENST00000515417 NARFQ9UHQ1 456 aa12.68□□□□□ -0.38
RACK1-234ENST00000515417 ANXA1P04083 346 aa12.67□□□□□ -0.38
RACK1-234ENST00000515417 IL6STP40189 918 aaPredicted RBP12.67□□□□□ -0.38
RACK1-234ENST00000515417 BICDL1Q6ZP65 573 aa12.67□□□□□ -0.38
RACK1-234ENST00000515417 MIER1Q8N108 512 aa12.67□□□□□ -0.38
RACK1-234ENST00000515417 NLGN1Q8N2Q7 840 aa12.67□□□□□ -0.38
RACK1-234ENST00000515417 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
RACK1-234ENST00000515417 GPBP1L1Q9HC44 474 aaPredicted RBP12.67□□□□□ -0.38
RACK1-234ENST00000515417 A0A087WZG4 1122 aa12.66□□□□□ -0.38
RACK1-234ENST00000515417 CAMTA2O94983 1202 aa12.66□□□□□ -0.38
RACK1-234ENST00000515417 ZNF853P0CG23 659 aa12.66□□□□□ -0.38
RACK1-234ENST00000515417 MYL6BP14649 208 aa12.66□□□□□ -0.38
RACK1-234ENST00000515417 PROSER3Q2NL68 480 aa12.66□□□□□ -0.38
RACK1-234ENST00000515417 WWC1Q8IX03 1113 aa12.66□□□□□ -0.38
RACK1-234ENST00000515417 TSR2Q969E8 191 aaKnown RBP12.66□□□□□ -0.38
RACK1-234ENST00000515417 IFT57Q9NWB7 429 aa12.66□□□□□ -0.38
RACK1-234ENST00000515417 BABAM1Q9NWV8 329 aa12.66□□□□□ -0.38
RACK1-234ENST00000515417 NFIXQ14938 502 aa12.65□□□□□ -0.38
RACK1-234ENST00000515417 NPM2Q86SE8 214 aaKnown RBP12.65□□□□□ -0.38
RACK1-234ENST00000515417 DZIP3Q86Y13 1208 aaKnown RBP12.65□□□□□ -0.38
RACK1-234ENST00000515417 CD2APQ9Y5K6 639 aa12.65□□□□□ -0.38
RACK1-234ENST00000515417 PARP3Q9Y6F1 533 aa12.65□□□□□ -0.38
RACK1-234ENST00000515417 ADCY9O60503 1353 aa12.65□□□□□ -0.38
RACK1-234ENST00000515417 LAMB4A4D0S4 1761 aa12.64□□□□□ -0.39
RACK1-234ENST00000515417 POLRMTO00411 1230 aaKnown RBP12.64□□□□□ -0.39
RACK1-234ENST00000515417 ELL2O00472 640 aaPredicted RBP12.64□□□□□ -0.39
RACK1-234ENST00000515417 GNAI1P63096 354 aa12.64□□□□□ -0.39
RACK1-234ENST00000515417 CALD1Q05682 793 aaKnown RBP12.64□□□□□ -0.39
RACK1-234ENST00000515417 DUSP27Q5VZP5 1158 aa12.64□□□□□ -0.39
RACK1-234ENST00000515417 TBC1D9BQ66K14 1250 aa12.64□□□□□ -0.39
RACK1-234ENST00000515417 TTLL7Q6ZT98 887 aa12.64□□□□□ -0.39
RACK1-234ENST00000515417 CCER2I3L3R5 266 aa12.63□□□□□ -0.39
RACK1-234ENST00000515417 KIF3CO14782 793 aa12.63□□□□□ -0.39
RACK1-234ENST00000515417 HSPA6P17066 643 aa12.63□□□□□ -0.39
RACK1-234ENST00000515417 TM4SF1P30408 202 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms