RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 ANKS4BQ8N8V4 417 aa16.73■□□□□ 0.27
TRIO-218ENST00000512070 DNAAF4Q8WXU2 420 aa16.73■□□□□ 0.27
TRIO-218ENST00000512070 CWC27Q6UX04 472 aaKnown RBP16.73■□□□□ 0.27
TRIO-218ENST00000512070 TTC12Q9H892 705 aaPredicted RBP16.73■□□□□ 0.27
TRIO-218ENST00000512070 CCDC171Q6TFL3 1326 aa16.73■□□□□ 0.27
TRIO-218ENST00000512070 TUBBP07437 444 aa16.72■□□□□ 0.27
TRIO-218ENST00000512070 CCDC113Q9H0I3 377 aa16.72■□□□□ 0.27
TRIO-218ENST00000512070 BMS1Q14692 1282 aaKnown RBP16.72■□□□□ 0.27
TRIO-218ENST00000512070 TSNARE1Q96NA8 513 aa16.72■□□□□ 0.27
TRIO-218ENST00000512070 IKBKGQ9Y6K9 419 aa16.72■□□□□ 0.27
TRIO-218ENST00000512070 PRXQ9BXM0 1461 aa16.72■□□□□ 0.27
TRIO-218ENST00000512070 CCDC178Q5BJE1 867 aa16.72■□□□□ 0.27
TRIO-218ENST00000512070 STARD3NLO95772 234 aa16.72■□□□□ 0.27
TRIO-218ENST00000512070 USP37Q86T82 979 aa16.72■□□□□ 0.27
TRIO-218ENST00000512070 HMGB1P1B2RPK0 211 aaPredicted RBP16.71■□□□□ 0.27
TRIO-218ENST00000512070 BMP15O95972 392 aa16.71■□□□□ 0.27
TRIO-218ENST00000512070 CTAGE1Q96RT6 745 aa16.71■□□□□ 0.27
TRIO-218ENST00000512070 FAM135AQ9P2D6 1515 aa16.71■□□□□ 0.27
TRIO-218ENST00000512070 CTNNA2P26232 953 aa16.7■□□□□ 0.26
TRIO-218ENST00000512070 CUL5Q93034 780 aa16.7■□□□□ 0.26
TRIO-218ENST00000512070 PPP4R3BQ5MIZ7 849 aa16.7■□□□□ 0.26
TRIO-218ENST00000512070 ZNF530Q6P9A1 599 aaPredicted RBP16.7■□□□□ 0.26
TRIO-218ENST00000512070 FMNL3Q8IVF7 1028 aa16.7■□□□□ 0.26
TRIO-218ENST00000512070 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
TRIO-218ENST00000512070 KIF5BP33176 963 aa16.7■□□□□ 0.26
TRIO-218ENST00000512070 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
TRIO-218ENST00000512070 CUL7Q14999 1698 aa16.7■□□□□ 0.26
TRIO-218ENST00000512070 SRRTQ9BXP5 876 aaKnown RBP16.7■□□□□ 0.26
TRIO-218ENST00000512070 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
TRIO-218ENST00000512070 BTBD11A6QL63 1104 aa16.7■□□□□ 0.26
TRIO-218ENST00000512070 MX1P20591 662 aa16.7■□□□□ 0.26
TRIO-218ENST00000512070 ACTN2P35609 894 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 TTC14Q96N46 770 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 HSPA4P34932 840 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 HMG20BQ9P0W2 317 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 RTEL1-TNFRSF6BF6WH68 1400 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 CAVIN4Q5BKX8 364 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 LIMCH1Q9UPQ0 1083 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 THEMISQ8N1K5 641 aaPredicted RBP16.69■□□□□ 0.26
TRIO-218ENST00000512070 CCDC155Q8N6L0 562 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 C1orf115Q9H7X2 142 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.69■□□□□ 0.261e-7■■■□□ 17.2
TRIO-218ENST00000512070 GOPCQ9HD26 462 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 RMND1Q9NWS8 449 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 URI1O94763 535 aaPredicted RBP16.69■□□□□ 0.26
TRIO-218ENST00000512070 SULT6B1Q6IMI4 303 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 NAPBQ9H115 298 aa16.69■□□□□ 0.26
TRIO-218ENST00000512070 ZSCAN16Q9H4T2 348 aaPredicted RBP16.69■□□□□ 0.26
TRIO-218ENST00000512070 TCP11L1Q9NUJ3 509 aa16.68■□□□□ 0.26
TRIO-218ENST00000512070 TRAF1Q13077 416 aa16.68■□□□□ 0.26
TRIO-218ENST00000512070 CALML4Q96GE6 196 aa16.68■□□□□ 0.26
TRIO-218ENST00000512070 MAP3K12Q12852 859 aa16.68■□□□□ 0.26
TRIO-218ENST00000512070 BAG4O95429 457 aaKnown RBP16.68■□□□□ 0.26
TRIO-218ENST00000512070 TNNT1P13805 278 aa16.68■□□□□ 0.26
TRIO-218ENST00000512070 PTPRCP08575 1304 aa16.68■□□□□ 0.26
TRIO-218ENST00000512070 UBE2HP62256 183 aa16.67■□□□□ 0.26
TRIO-218ENST00000512070 CNNM3Q8NE01 707 aa16.67■□□□□ 0.26
TRIO-218ENST00000512070 HOMER2Q9NSB8 354 aa16.67■□□□□ 0.26
TRIO-218ENST00000512070 TIGD1Q96MW7 591 aa16.67■□□□□ 0.26
TRIO-218ENST00000512070 POGZQ7Z3K3 1410 aa16.67■□□□□ 0.26
TRIO-218ENST00000512070 TTF1Q15361 905 aaPredicted RBP16.67■□□□□ 0.26
TRIO-218ENST00000512070 KCNH5Q8NCM2 988 aa16.67■□□□□ 0.26
TRIO-218ENST00000512070 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
TRIO-218ENST00000512070 SIL1Q9H173 461 aa16.67■□□□□ 0.26
TRIO-218ENST00000512070 RASAL2Q9UJF2 1139 aa16.67■□□□□ 0.26
TRIO-218ENST00000512070 PABPN1LA6NDY0 278 aaKnown RBP16.67■□□□□ 0.26
TRIO-218ENST00000512070 NFE2L2Q16236 605 aa16.67■□□□□ 0.26
TRIO-218ENST00000512070 GNAT3A8MTJ3 354 aa16.67■□□□□ 0.26
TRIO-218ENST00000512070 HLTFQ14527 1009 aaKnown RBP eCLIP16.67■□□□□ 0.264e-8■□□□□ 8.5
TRIO-218ENST00000512070 CATIPQ7Z7H3 387 aa16.67■□□□□ 0.26
TRIO-218ENST00000512070 RBM5P52756 815 aaKnown RBP eCLIP16.67■□□□□ 0.262e-9■■■□□ 15.2
TRIO-218ENST00000512070 RAI14Q9P0K7 980 aa16.67■□□□□ 0.26
TRIO-218ENST00000512070 PEG3Q9GZU2 1588 aa16.66■□□□□ 0.26
TRIO-218ENST00000512070 SLC12A7Q9Y666 1083 aa16.66■□□□□ 0.26
TRIO-218ENST00000512070 HSF2BPO75031 334 aa16.66■□□□□ 0.26
TRIO-218ENST00000512070 DDX46Q7L014 1031 aaKnown RBP16.66■□□□□ 0.26
TRIO-218ENST00000512070 SNW1Q13573 536 aaKnown RBP16.66■□□□□ 0.26
TRIO-218ENST00000512070 DDX23Q9BUQ8 820 aaKnown RBP16.66■□□□□ 0.26
TRIO-218ENST00000512070 PODXL2Q9NZ53 605 aa16.66■□□□□ 0.26
TRIO-218ENST00000512070 KIF14Q15058 1648 aa16.66■□□□□ 0.26
TRIO-218ENST00000512070 IFIT1P09914 478 aaKnown RBP16.66■□□□□ 0.26
TRIO-218ENST00000512070 ARFGAP3Q9NP61 516 aa16.66■□□□□ 0.26
TRIO-218ENST00000512070 MPHOSPH6Q99547 160 aaKnown RBP16.65■□□□□ 0.26
TRIO-218ENST00000512070 PIBF1Q8WXW3 757 aa16.65■□□□□ 0.26
TRIO-218ENST00000512070 ESCO1Q5FWF5 840 aa16.65■□□□□ 0.26
TRIO-218ENST00000512070 RNF187Q5TA31 235 aaPredicted RBP16.65■□□□□ 0.26
TRIO-218ENST00000512070 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.65■□□□□ 0.268e-7■■□□□ 14.2
TRIO-218ENST00000512070 CCDC194A0A1B0GVG4 234 aa16.65■□□□□ 0.26
TRIO-218ENST00000512070 SSRP1Q08945 709 aaKnown RBP16.65■□□□□ 0.26
TRIO-218ENST00000512070 AMOTQ4VCS5 1084 aa16.65■□□□□ 0.26
TRIO-218ENST00000512070 SELENOOQ9BVL4 669 aa16.65■□□□□ 0.26
TRIO-218ENST00000512070 NSD2O96028 1365 aa16.65■□□□□ 0.26
TRIO-218ENST00000512070 SF3B2Q13435 895 aaKnown RBP16.65■□□□□ 0.26
TRIO-218ENST00000512070 DNMBPQ6XZF7 1577 aa16.65■□□□□ 0.26
TRIO-218ENST00000512070 CDCA7LQ96GN5 454 aa16.64■□□□□ 0.26
TRIO-218ENST00000512070 ZSCAN29Q8IWY8 852 aaPredicted RBP16.64■□□□□ 0.25
TRIO-218ENST00000512070 KRT222Q8N1A0 295 aa16.64■□□□□ 0.25
TRIO-218ENST00000512070 PRAM1Q96QH2 718 aa16.64■□□□□ 0.25
TRIO-218ENST00000512070 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms