RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	CYP19A1	P11511	503 aa	Predicted RBP	15.34	■□□□□ 0.05
RACK1-223	ENST00000510199	BRPF1	P55201	1214 aa	Predicted RBP	15.34	■□□□□ 0.05
RACK1-223	ENST00000510199	SLC27A3	Q5K4L6	730 aa		15.34	■□□□□ 0.05
RACK1-223	ENST00000510199	NECTIN2	Q92692	538 aa		15.34	■□□□□ 0.05
RACK1-223	ENST00000510199	SMC4	Q9NTJ3	1288 aa		15.34	■□□□□ 0.05
RACK1-223	ENST00000510199	DBF4	Q9UBU7	674 aa	Predicted RBP	15.34	■□□□□ 0.05
RACK1-223	ENST00000510199	CCNL1	Q9UK58	526 aa	Predicted RBP	15.34	■□□□□ 0.05
RACK1-223	ENST00000510199	UBR3	Q6ZT12	1888 aa		15.33	■□□□□ 0.05
RACK1-223	ENST00000510199	BCAR3	O75815	825 aa		15.33	■□□□□ 0.04
RACK1-223	ENST00000510199	HMGB2	P26583	209 aa	Known RBP	15.33	■□□□□ 0.04
RACK1-223	ENST00000510199	SF3B2	Q13435	895 aa	Known RBP	15.33	■□□□□ 0.04
RACK1-223	ENST00000510199	ITPK1	Q13572	414 aa		15.33	■□□□□ 0.04
RACK1-223	ENST00000510199	CCDC125	Q86Z20	511 aa		15.33	■□□□□ 0.04
RACK1-223	ENST00000510199	MRPL50	Q8N5N7	158 aa	Known RBP	15.33	■□□□□ 0.04
RACK1-223	ENST00000510199	BCL2L13	Q9BXK5	485 aa		15.33	■□□□□ 0.04
RACK1-223	ENST00000510199	TCERG1	O14776	1098 aa	Known RBP	15.32	■□□□□ 0.04
RACK1-223	ENST00000510199	SLC4A2	P04920	1241 aa		15.32	■□□□□ 0.04
RACK1-223	ENST00000510199	DDX21	Q9NR30	783 aa	Known RBP eCLIP	15.32	■□□□□ 0.04
RACK1-223	ENST00000510199	CHPF2	Q9P2E5	772 aa		15.32	■□□□□ 0.04
RACK1-223	ENST00000510199	PDIA6	Q15084	440 aa		15.31	■□□□□ 0.04
RACK1-223	ENST00000510199	TXNRD1	Q16881	649 aa		15.31	■□□□□ 0.04
RACK1-223	ENST00000510199	HYPK	Q9NX55	129 aa		15.31	■□□□□ 0.04
RACK1-223	ENST00000510199	KIF16B	Q96L93	1317 aa		15.31	■□□□□ 0.04
RACK1-223	ENST00000510199	NUP188	Q5SRE5	1749 aa		15.31	■□□□□ 0.04
RACK1-223	ENST00000510199	N4BP2	Q86UW6	1770 aa	Predicted RBP	15.31	■□□□□ 0.04
RACK1-223	ENST00000510199	NUP98	P52948	1817 aa		15.31	■□□□□ 0.04
RACK1-223	ENST00000510199	TUBGCP6	Q96RT7	1819 aa		15.31	■□□□□ 0.04
RACK1-223	ENST00000510199	A1BG	P04217	495 aa		15.3	■□□□□ 0.04
RACK1-223	ENST00000510199	BAG6	P46379	1132 aa		15.3	■□□□□ 0.04
RACK1-223	ENST00000510199	KCNQ4	P56696	695 aa		15.3	■□□□□ 0.04
RACK1-223	ENST00000510199	PROM2	Q8N271	834 aa		15.3	■□□□□ 0.04
RACK1-223	ENST00000510199	LINC00116	Q8NCU8	138 aa		15.3	■□□□□ 0.04
RACK1-223	ENST00000510199	CNTNAP4	Q9C0A0	1308 aa		15.3	■□□□□ 0.04
RACK1-223	ENST00000510199	LRRC4B	Q9NT99	713 aa		15.3	■□□□□ 0.04
RACK1-223	ENST00000510199	ARFGEF2	Q9Y6D5	1785 aa		15.3	■□□□□ 0.04
RACK1-223	ENST00000510199	RNF123	Q5XPI4	1314 aa		15.29	■□□□□ 0.04
RACK1-223	ENST00000510199	NBPF26	B4DH59	902 aa		15.29	■□□□□ 0.04
RACK1-223	ENST00000510199	CRKL	P46109	303 aa	Known RBP	15.29	■□□□□ 0.04
RACK1-223	ENST00000510199	PROSER3	Q2NL68	480 aa		15.29	■□□□□ 0.04
RACK1-223	ENST00000510199	RC3H1	Q5TC82	1133 aa	Known RBP	15.29	■□□□□ 0.04
RACK1-223	ENST00000510199	NBPF14	Q5TI25	921 aa		15.29	■□□□□ 0.04
RACK1-223	ENST00000510199	NBPF10	Q6P3W6	841 aa	Known RBP	15.29	■□□□□ 0.04
RACK1-223	ENST00000510199	NBPF15	Q8N660	670 aa		15.29	■□□□□ 0.04
RACK1-223	ENST00000510199	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	15.29	■□□□□ 0.04
RACK1-223	ENST00000510199	CCDC87	Q9NVE4	849 aa		15.29	■□□□□ 0.04
RACK1-223	ENST00000510199	SUPT16H	Q9Y5B9	1047 aa	Known RBP	15.29	■□□□□ 0.04
RACK1-223	ENST00000510199	QSER1	Q2KHR3	1735 aa		15.29	■□□□□ 0.04
RACK1-223	ENST00000510199	IPO8	O15397	1037 aa	Known RBP	15.28	■□□□□ 0.04
RACK1-223	ENST00000510199	ANXA1	P04083	346 aa		15.28	■□□□□ 0.04
RACK1-223	ENST00000510199	MYL6B	P14649	208 aa		15.28	■□□□□ 0.04
RACK1-223	ENST00000510199	INTS5	Q6P9B9	1019 aa	Known RBP	15.28	■□□□□ 0.04
RACK1-223	ENST00000510199	LRP10	Q7Z4F1	713 aa		15.28	■□□□□ 0.04
RACK1-223	ENST00000510199	CAMKK2	Q96RR4	588 aa		15.28	■□□□□ 0.04
RACK1-223	ENST00000510199	NOB1	Q9ULX3	412 aa	Known RBP	15.28	■□□□□ 0.04
RACK1-223	ENST00000510199	ZBTB1	Q9Y2K1	713 aa		15.28	■□□□□ 0.04
RACK1-223	ENST00000510199	C4A	P0C0L4	1744 aa		15.28	■□□□□ 0.04
RACK1-223	ENST00000510199	AFDN	P55196	1824 aa	Known RBP	15.27	■□□□□ 0.04
RACK1-223	ENST00000510199	ANKRD36C	Q5JPF3	1778 aa		15.27	■□□□□ 0.04
RACK1-223	ENST00000510199	BCOR	Q6W2J9	1755 aa		15.27	■□□□□ 0.04
RACK1-223	ENST00000510199	PTPRC	P08575	1304 aa		15.27	■□□□□ 0.04
RACK1-223	ENST00000510199	IL6ST	P40189	918 aa	Predicted RBP	15.27	■□□□□ 0.04
RACK1-223	ENST00000510199	PIP4K2A	P48426	406 aa	Predicted RBP	15.27	■□□□□ 0.04
RACK1-223	ENST00000510199	RRP1	P56182	461 aa	Known RBP	15.27	■□□□□ 0.04
RACK1-223	ENST00000510199	EN1	Q05925	392 aa	Predicted RBP	15.27	■□□□□ 0.04
RACK1-223	ENST00000510199	FLII	Q13045	1269 aa		15.27	■□□□□ 0.04
RACK1-223	ENST00000510199	G2E3	Q7L622	706 aa		15.27	■□□□□ 0.04
RACK1-223	ENST00000510199	ARHGAP45	Q92619	1136 aa		15.27	■□□□□ 0.04
RACK1-223	ENST00000510199	PHAX	Q9H814	394 aa	Known RBP	15.27	■□□□□ 0.04
RACK1-223	ENST00000510199	CANX	P27824	592 aa	Known RBP	15.26	■□□□□ 0.03
RACK1-223	ENST00000510199	EZH2	Q15910	746 aa	Known RBP	15.26	■□□□□ 0.03
RACK1-223	ENST00000510199	ZKSCAN2	Q63HK3	967 aa		15.26	■□□□□ 0.03
RACK1-223	ENST00000510199	FRAT1	Q92837	279 aa	Predicted RBP	15.26	■□□□□ 0.03
RACK1-223	ENST00000510199	EIF5	P55010	431 aa	Known RBP	15.25	■□□□□ 0.03
RACK1-223	ENST00000510199	UPF1	Q92900	1129 aa	Known RBP eCLIP	15.25	■□□□□ 0.03
RACK1-223	ENST00000510199	PLIN1	O60240	522 aa		15.24	■□□□□ 0.03
RACK1-223	ENST00000510199	RPS6KA4	O75676	772 aa		15.24	■□□□□ 0.03
RACK1-223	ENST00000510199	FKBP5	Q13451	457 aa	Predicted RBP	15.24	■□□□□ 0.03
RACK1-223	ENST00000510199	ATF7IP	Q6VMQ6	1270 aa		15.24	■□□□□ 0.03
RACK1-223	ENST00000510199	ILDR2	Q71H61	639 aa		15.24	■□□□□ 0.03
RACK1-223	ENST00000510199	COPS6	Q7L5N1	327 aa		15.24	■□□□□ 0.03
RACK1-223	ENST00000510199	DEFB132	Q7Z7B7	95 aa		15.24	■□□□□ 0.03
RACK1-223	ENST00000510199	XAGE3	Q8WTP9	111 aa		15.24	■□□□□ 0.03
RACK1-223	ENST00000510199	AK7	Q96M32	723 aa		15.24	■□□□□ 0.03
RACK1-223	ENST00000510199	API5	Q9BZZ5	524 aa	Known RBP	15.24	■□□□□ 0.03
RACK1-223	ENST00000510199	SCN7A	Q01118	1682 aa		15.23	■□□□□ 0.03
RACK1-223	ENST00000510199	DDX58	O95786	925 aa	Known RBP	15.23	■□□□□ 0.03
RACK1-223	ENST00000510199	MS4A1	P11836	297 aa		15.23	■□□□□ 0.03
RACK1-223	ENST00000510199	AIMP1	Q12904	312 aa	Known RBP	15.23	■□□□□ 0.03
RACK1-223	ENST00000510199	NPM2	Q86SE8	214 aa	Known RBP	15.23	■□□□□ 0.03
RACK1-223	ENST00000510199	COL15A1	P39059	1388 aa		15.23	■□□□□ 0.03
RACK1-223	ENST00000510199	GNPAT	O15228	680 aa		15.22	■□□□□ 0.03
RACK1-223	ENST00000510199	TRIM27	P14373	513 aa		15.22	■□□□□ 0.03
RACK1-223	ENST00000510199	RTCB	Q9Y3I0	505 aa	Known RBP	15.22	■□□□□ 0.03
RACK1-223	ENST00000510199	ZNF330	Q9Y3S2	320 aa	Predicted RBP	15.22	■□□□□ 0.03
RACK1-223	ENST00000510199	PXDNL	A1KZ92	1463 aa		15.21	■□□□□ 0.03
RACK1-223	ENST00000510199		A0A087WZG4	1122 aa		15.21	■□□□□ 0.03
RACK1-223	ENST00000510199	PDE3A	Q14432	1141 aa		15.21	■□□□□ 0.03
RACK1-223	ENST00000510199	KSR2	Q6VAB6	950 aa		15.21	■□□□□ 0.03
RACK1-223	ENST00000510199	TTLL7	Q6ZT98	887 aa		15.21	■□□□□ 0.03
RACK1-223	ENST00000510199	ANKRD13D	Q6ZTN6	518 aa		15.21	■□□□□ 0.03

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms