RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ZPR1O75312 459 aa26.18■■□□□ 1.78
SFXN1-209ENST00000508290 MMP10P09238 476 aa26.18■■□□□ 1.78
SFXN1-209ENST00000508290 SNRPA1P09661 255 aaKnown RBP26.18■■□□□ 1.78
SFXN1-209ENST00000508290 ZBTB1Q9Y2K1 713 aa26.18■■□□□ 1.78
SFXN1-209ENST00000508290 COL15A1P39059 1388 aa26.18■■□□□ 1.78
SFXN1-209ENST00000508290 C4AP0C0L4 1744 aa26.17■■□□□ 1.78
SFXN1-209ENST00000508290 TMPOP42166 694 aaKnown RBP26.16■■□□□ 1.78
SFXN1-209ENST00000508290 RIPK4P57078 832 aa26.16■■□□□ 1.78
SFXN1-209ENST00000508290 NPM2Q86SE8 214 aaKnown RBP26.16■■□□□ 1.78
SFXN1-209ENST00000508290 BABAM1Q9NWV8 329 aa26.16■■□□□ 1.78
SFXN1-209ENST00000508290 IL6STP40189 918 aaPredicted RBP26.15■■□□□ 1.78
SFXN1-209ENST00000508290 NARFQ9UHQ1 456 aa26.15■■□□□ 1.78
SFXN1-209ENST00000508290 ANP32CO43423 234 aa26.14■■□□□ 1.78
SFXN1-209ENST00000508290 EIF5P55010 431 aaKnown RBP26.14■■□□□ 1.78
SFXN1-209ENST00000508290 ADAMTS8Q9UP79 889 aa26.14■■□□□ 1.78
SFXN1-209ENST00000508290 DLG5Q8TDM6 1919 aa26.14■■□□□ 1.77
SFXN1-209ENST00000508290 KCNQ3O43525 872 aa26.13■■□□□ 1.77
SFXN1-209ENST00000508290 CANXP27824 592 aaKnown RBP26.13■■□□□ 1.77
SFXN1-209ENST00000508290 PARP3Q9Y6F1 533 aa26.13■■□□□ 1.77
SFXN1-209ENST00000508290 NLGN2Q8NFZ4 835 aa26.11■■□□□ 1.77
SFXN1-209ENST00000508290 SRP68Q9UHB9 627 aaKnown RBP26.1■■□□□ 1.77
SFXN1-209ENST00000508290 FKBP8Q14318 412 aa26.09■■□□□ 1.77
SFXN1-209ENST00000508290 GPR162Q16538 588 aa26.09■■□□□ 1.77
SFXN1-209ENST00000508290 USPL1Q5W0Q7 1092 aa26.09■■□□□ 1.77
SFXN1-209ENST00000508290 CCDC146Q8IYE0 955 aa26.08■■□□□ 1.77
SFXN1-209ENST00000508290 KDM3BQ7LBC6 1761 aa26.07■■□□□ 1.76
SFXN1-209ENST00000508290 C10orf71Q711Q0 1435 aa26.07■■□□□ 1.76
SFXN1-209ENST00000508290 TGFB2P61812 414 aa26.07■■□□□ 1.76
SFXN1-209ENST00000508290 THUMPD2Q9BTF0 503 aaKnown RBP26.07■■□□□ 1.76
SFXN1-209ENST00000508290 USP16Q9Y5T5 823 aa26.07■■□□□ 1.76
SFXN1-209ENST00000508290 RGL2O15211 777 aa26.06■■□□□ 1.76
SFXN1-209ENST00000508290 GRIN3BO60391 1043 aa26.06■■□□□ 1.76
SFXN1-209ENST00000508290 A1BGP04217 495 aa26.06■■□□□ 1.76
SFXN1-209ENST00000508290 TM4SF1P30408 202 aa26.06■■□□□ 1.76
SFXN1-209ENST00000508290 TSPYL4Q9UJ04 414 aa26.06■■□□□ 1.76
SFXN1-209ENST00000508290 EIF4A1P60842 406 aaKnown RBP26.05■■□□□ 1.76
SFXN1-209ENST00000508290 MIS18AQ9NYP9 233 aa26.05■■□□□ 1.76
SFXN1-209ENST00000508290 GIGYF1O75420 1035 aaPredicted RBP26.04■■□□□ 1.76
SFXN1-209ENST00000508290 POLRMTO00411 1230 aaKnown RBP26.02■■□□□ 1.76
SFXN1-209ENST00000508290 CALD1Q05682 793 aaKnown RBP26.02■■□□□ 1.76
SFXN1-209ENST00000508290 NEUROD2Q15784 382 aa26.02■■□□□ 1.76
SFXN1-209ENST00000508290 RRP7AQ9Y3A4 280 aaKnown RBP26.02■■□□□ 1.76
SFXN1-209ENST00000508290 ZNF330Q9Y3S2 320 aaPredicted RBP26.02■■□□□ 1.76
SFXN1-209ENST00000508290 LAMB4A4D0S4 1761 aa26.02■■□□□ 1.76
SFXN1-209ENST00000508290 KIF13BQ9NQT8 1826 aa26.02■■□□□ 1.76
SFXN1-209ENST00000508290 DDR1Q08345 913 aa26.01■■□□□ 1.75
SFXN1-209ENST00000508290 ERBB4Q15303 1308 aa26.01■■□□□ 1.75
SFXN1-209ENST00000508290 BCL2L12Q9HB09 334 aa26.01■■□□□ 1.75
SFXN1-209ENST00000508290 TRIM35Q9UPQ4 493 aa26.01■■□□□ 1.75
SFXN1-209ENST00000508290 SCN7AQ01118 1682 aa26■■□□□ 1.75
SFXN1-209ENST00000508290 PRAMEF22A3QJZ6 481 aa26■■□□□ 1.75
SFXN1-209ENST00000508290 NFIXQ14938 502 aa26■■□□□ 1.75
SFXN1-209ENST00000508290 DZIP3Q86Y13 1208 aaKnown RBP26■■□□□ 1.75
SFXN1-209ENST00000508290 PELP1Q8IZL8 1130 aaKnown RBP26■■□□□ 1.75
SFXN1-209ENST00000508290 ZNF652Q9Y2D9 606 aa26■■□□□ 1.75
SFXN1-209ENST00000508290 YY1P25490 414 aa25.99■■□□□ 1.75
SFXN1-209ENST00000508290 CLEC4GQ6UXB4 293 aa25.99■■□□□ 1.75
SFXN1-209ENST00000508290 PXDNLA1KZ92 1463 aa25.98■■□□□ 1.75
SFXN1-209ENST00000508290 MRS2Q9HD23 443 aa25.98■■□□□ 1.75
SFXN1-209ENST00000508290 TBC1D2BQ9UPU7 963 aa25.98■■□□□ 1.75
SFXN1-209ENST00000508290 CHL1O00533 1208 aa25.97■■□□□ 1.75
SFXN1-209ENST00000508290 APAF1O14727 1248 aa25.96■■□□□ 1.75
SFXN1-209ENST00000508290 CAMTA2O94983 1202 aa25.96■■□□□ 1.75
SFXN1-209ENST00000508290 CARMIL3Q8ND23 1372 aa25.95■■□□□ 1.75
SFXN1-209ENST00000508290 NBPF26B4DH59 902 aa25.95■■□□□ 1.74
SFXN1-209ENST00000508290 SERPINB2P05120 415 aa25.95■■□□□ 1.74
SFXN1-209ENST00000508290 NCBP3Q53F19 620 aaKnown RBP25.95■■□□□ 1.74
SFXN1-209ENST00000508290 NBPF10Q6P3W6 841 aaKnown RBP25.95■■□□□ 1.74
SFXN1-209ENST00000508290 NBPF15Q8N660 670 aa25.95■■□□□ 1.74
SFXN1-209ENST00000508290 CFAP44Q96MT7 982 aa25.95■■□□□ 1.74
SFXN1-209ENST00000508290 YBX3P16989 372 aaKnown RBP eCLIP25.94■■□□□ 1.741e-8■□□□□ 10.8
SFXN1-209ENST00000508290 SETDB2Q96T68 719 aa25.93■■□□□ 1.74
SFXN1-209ENST00000508290 PDZRN3Q9UPQ7 1066 aa25.93■■□□□ 1.74
SFXN1-209ENST00000508290 NRXN2Q9P2S2 1712 aa25.92■■□□□ 1.74
SFXN1-209ENST00000508290 HOXB7P09629 217 aa25.92■■□□□ 1.74
SFXN1-209ENST00000508290 CCDC184Q52MB2 194 aa25.92■■□□□ 1.74
SFXN1-209ENST00000508290 TBC1D9BQ66K14 1250 aa25.91■■□□□ 1.74
SFXN1-209ENST00000508290 BCORQ6W2J9 1755 aa25.91■■□□□ 1.74
SFXN1-209ENST00000508290 ERVV-1B6SEH8 477 aa25.9■■□□□ 1.74
SFXN1-209ENST00000508290 PIP4K2AP48426 406 aaPredicted RBP25.9■■□□□ 1.74
SFXN1-209ENST00000508290 GNAI1P63096 354 aa25.9■■□□□ 1.74
SFXN1-209ENST00000508290 CCDC27Q2M243 656 aa25.9■■□□□ 1.74
SFXN1-209ENST00000508290 IFT57Q9NWB7 429 aa25.9■■□□□ 1.74
SFXN1-209ENST00000508290 KIAA1551Q9HCM1 1747 aa25.89■■□□□ 1.74
SFXN1-209ENST00000508290 A0A0G2JLW4 131 aa25.89■■□□□ 1.74
SFXN1-209ENST00000508290 DPEP1P16444 411 aa25.89■■□□□ 1.74
SFXN1-209ENST00000508290 KIF6Q6ZMV9 814 aa25.89■■□□□ 1.74
SFXN1-209ENST00000508290 BICDL1Q6ZP65 573 aa25.89■■□□□ 1.74
SFXN1-209ENST00000508290 PIM2Q9P1W9 311 aa25.89■■□□□ 1.74
SFXN1-209ENST00000508290 LAS1LQ9Y4W2 734 aaKnown RBP25.89■■□□□ 1.74
SFXN1-209ENST00000508290 CHMP4AQ9BY43 222 aa25.87■■□□□ 1.73
SFXN1-209ENST00000508290 CHD4Q14839 1912 aa25.86■■□□□ 1.73
SFXN1-209ENST00000508290 ZNF853P0CG23 659 aa25.86■■□□□ 1.73
SFXN1-209ENST00000508290 BRIP1Q9BX63 1249 aa25.86■■□□□ 1.73
SFXN1-209ENST00000508290 UTRNP46939 3433 aa25.85■■□□□ 1.73
SFXN1-209ENST00000508290 PDE6BP35913 854 aa25.85■■□□□ 1.73
SFXN1-209ENST00000508290 CNBD1Q8NA66 436 aa25.85■■□□□ 1.73
SFXN1-209ENST00000508290 MAP3K15Q6ZN16 1313 aa25.85■■□□□ 1.73
SFXN1-209ENST00000508290 NPHP1O15259 732 aa25.84■■□□□ 1.73
SFXN1-209ENST00000508290 MYL6BP14649 208 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms