RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 DCTN1Q14203 1278 aa32.89■■■□□ 2.86
TRIO-204ENST00000502816 NFE2L2Q16236 605 aa32.89■■■□□ 2.86
TRIO-204ENST00000502816 SRP68Q9UHB9 627 aaKnown RBP32.88■■■□□ 2.85
TRIO-204ENST00000502816 YY1P25490 414 aa32.87■■■□□ 2.85
TRIO-204ENST00000502816 GPR162Q16538 588 aa32.87■■■□□ 2.85
TRIO-204ENST00000502816 COL15A1P39059 1388 aa32.86■■■□□ 2.85
TRIO-204ENST00000502816 TAF7Q15545 349 aaPredicted RBP32.86■■■□□ 2.85
TRIO-204ENST00000502816 EIF5P55010 431 aaKnown RBP32.85■■■□□ 2.85
TRIO-204ENST00000502816 NARFQ9UHQ1 456 aa32.85■■■□□ 2.85
TRIO-204ENST00000502816 FKBP8Q14318 412 aa32.84■■■□□ 2.85
TRIO-204ENST00000502816 MAPK8IP3Q9UPT6 1336 aa32.83■■■□□ 2.85
TRIO-204ENST00000502816 KIAA1551Q9HCM1 1747 aa32.83■■■□□ 2.85
TRIO-204ENST00000502816 TM4SF1P30408 202 aa32.83■■■□□ 2.85
TRIO-204ENST00000502816 C10orf71Q711Q0 1435 aa32.83■■■□□ 2.85
TRIO-204ENST00000502816 ZPR1O75312 459 aa32.82■■■□□ 2.84
TRIO-204ENST00000502816 YBX3P16989 372 aaKnown RBP eCLIP32.81■■■□□ 2.84
TRIO-204ENST00000502816 USPL1Q5W0Q7 1092 aa32.81■■■□□ 2.84
TRIO-204ENST00000502816 PARP3Q9Y6F1 533 aa32.81■■■□□ 2.84
TRIO-204ENST00000502816 KDM3BQ7LBC6 1761 aa32.81■■■□□ 2.84
TRIO-204ENST00000502816 CANXP27824 592 aaKnown RBP32.8■■■□□ 2.84
TRIO-204ENST00000502816 TGFB2P61812 414 aa32.8■■■□□ 2.84
TRIO-204ENST00000502816 A0A087WZG4 1122 aa32.79■■■□□ 2.84
TRIO-204ENST00000502816 GRIN3BO60391 1043 aa32.79■■■□□ 2.84
TRIO-204ENST00000502816 IL6STP40189 918 aaPredicted RBP32.79■■■□□ 2.84
TRIO-204ENST00000502816 PNISRQ8TF01 805 aaKnown RBP32.79■■■□□ 2.84
TRIO-204ENST00000502816 SNRPA1P09661 255 aaKnown RBP32.78■■■□□ 2.84
TRIO-204ENST00000502816 BCL2L12Q9HB09 334 aa32.78■■■□□ 2.84
TRIO-204ENST00000502816 USP16Q9Y5T5 823 aa32.78■■■□□ 2.84
TRIO-204ENST00000502816 DDR1Q08345 913 aa32.77■■■□□ 2.84
TRIO-204ENST00000502816 PXDNLA1KZ92 1463 aa32.75■■■□□ 2.83
TRIO-204ENST00000502816 NRXN2Q9P2S2 1712 aa32.75■■■□□ 2.83
TRIO-204ENST00000502816 POLRMTO00411 1230 aaKnown RBP32.75■■■□□ 2.83
TRIO-204ENST00000502816 A1BGP04217 495 aa32.75■■■□□ 2.83
TRIO-204ENST00000502816 PELP1Q8IZL8 1130 aaKnown RBP32.74■■■□□ 2.83
TRIO-204ENST00000502816 N4BP2Q86UW6 1770 aaPredicted RBP32.73■■■□□ 2.83
TRIO-204ENST00000502816 TMPOP42166 694 aaKnown RBP32.73■■■□□ 2.83
TRIO-204ENST00000502816 SCN7AQ01118 1682 aa32.72■■■□□ 2.83
TRIO-204ENST00000502816 PRAMEF22A3QJZ6 481 aa32.72■■■□□ 2.83
TRIO-204ENST00000502816 RIPK4P57078 832 aa32.72■■■□□ 2.83
TRIO-204ENST00000502816 MIS18AQ9NYP9 233 aa32.72■■■□□ 2.83
TRIO-204ENST00000502816 AFDNP55196 1824 aaKnown RBP32.72■■■□□ 2.83
TRIO-204ENST00000502816 BRCA1P38398 1863 aaKnown RBP32.71■■■□□ 2.83
TRIO-204ENST00000502816 LAMB4A4D0S4 1761 aa32.7■■■□□ 2.83
TRIO-204ENST00000502816 ZNF316A6NFI3 1004 aaPredicted RBP32.7■■■□□ 2.83
TRIO-204ENST00000502816 NFIXQ14938 502 aa32.7■■■□□ 2.83
TRIO-204ENST00000502816 WDR43Q15061 677 aaKnown RBP eCLIP32.7■■■□□ 2.83
TRIO-204ENST00000502816 RUNDC1Q96C34 613 aa32.7■■■□□ 2.83
TRIO-204ENST00000502816 THUMPD2Q9BTF0 503 aaKnown RBP32.7■■■□□ 2.83
TRIO-204ENST00000502816 ADAMTS8Q9UP79 889 aa32.7■■■□□ 2.83
TRIO-204ENST00000502816 BABAM1Q9NWV8 329 aa32.69■■■□□ 2.82
TRIO-204ENST00000502816 EIF4A1P60842 406 aaKnown RBP32.68■■■□□ 2.82
TRIO-204ENST00000502816 LMOD3Q0VAK6 560 aa32.67■■■□□ 2.82
TRIO-204ENST00000502816 BCORQ6W2J9 1755 aa32.67■■■□□ 2.82
TRIO-204ENST00000502816 GIGYF1O75420 1035 aaPredicted RBP32.65■■■□□ 2.82
TRIO-204ENST00000502816 KCNA3P22001 575 aa32.65■■■□□ 2.82
TRIO-204ENST00000502816 TBC1D2BQ9UPU7 963 aa32.65■■■□□ 2.82
TRIO-204ENST00000502816 A0A0G2JLW4 131 aa32.64■■■□□ 2.82
TRIO-204ENST00000502816 CAMTA2O94983 1202 aa32.64■■■□□ 2.82
TRIO-204ENST00000502816 NBPF26B4DH59 902 aa32.63■■■□□ 2.81
TRIO-204ENST00000502816 DPEP1P16444 411 aa32.63■■■□□ 2.81
TRIO-204ENST00000502816 NBPF10Q6P3W6 841 aaKnown RBP32.63■■■□□ 2.81
TRIO-204ENST00000502816 CCDC146Q8IYE0 955 aa32.63■■■□□ 2.81
TRIO-204ENST00000502816 NBPF15Q8N660 670 aa32.63■■■□□ 2.81
TRIO-204ENST00000502816 RGL2O15211 777 aa32.62■■■□□ 2.81
TRIO-204ENST00000502816 SERPINB2P05120 415 aa32.61■■■□□ 2.81
TRIO-204ENST00000502816 NPM2Q86SE8 214 aaKnown RBP32.61■■■□□ 2.81
TRIO-204ENST00000502816 TBC1D9BQ66K14 1250 aa32.6■■■□□ 2.81
TRIO-204ENST00000502816 DZIP3Q86Y13 1208 aaKnown RBP32.6■■■□□ 2.81
TRIO-204ENST00000502816 ZNF784Q8NCA9 323 aaPredicted RBP32.6■■■□□ 2.81
TRIO-204ENST00000502816 TRIM35Q9UPQ4 493 aa32.6■■■□□ 2.81
TRIO-204ENST00000502816 ARFGEF1Q9Y6D6 1849 aa32.59■■■□□ 2.81
TRIO-204ENST00000502816 CLEC4GQ6UXB4 293 aa32.59■■■□□ 2.81
TRIO-204ENST00000502816 ZNF330Q9Y3S2 320 aaPredicted RBP32.59■■■□□ 2.81
TRIO-204ENST00000502816 PIP4K2AP48426 406 aaPredicted RBP32.58■■■□□ 2.81
TRIO-204ENST00000502816 RRP7AQ9Y3A4 280 aaKnown RBP32.58■■■□□ 2.81
TRIO-204ENST00000502816 TSPYL4Q9UJ04 414 aa32.57■■■□□ 2.8
TRIO-204ENST00000502816 PIM2Q9P1W9 311 aa32.55■■■□□ 2.8
TRIO-204ENST00000502816 CARMIL3Q8ND23 1372 aa32.55■■■□□ 2.8
TRIO-204ENST00000502816 DLEC1Q9Y238 1755 aa32.55■■■□□ 2.8
TRIO-204ENST00000502816 WWC3Q9ULE0 1092 aa32.54■■■□□ 2.8
TRIO-204ENST00000502816 CHL1O00533 1208 aa32.53■■■□□ 2.8
TRIO-204ENST00000502816 NEUROD2Q15784 382 aa32.53■■■□□ 2.8
TRIO-204ENST00000502816 BICDL1Q6ZP65 573 aa32.52■■■□□ 2.8
TRIO-204ENST00000502816 BCS1LQ9Y276 419 aa32.52■■■□□ 2.8
TRIO-204ENST00000502816 ERBB4Q15303 1308 aa32.51■■■□□ 2.8
TRIO-204ENST00000502816 ANKRD31Q8N7Z5 1873 aa32.51■■■□□ 2.79
TRIO-204ENST00000502816 SETDB2Q96T68 719 aa32.51■■■□□ 2.79
TRIO-204ENST00000502816 CHRNA5P30532 468 aa32.5■■■□□ 2.79
TRIO-204ENST00000502816 CCDC184Q52MB2 194 aa32.49■■■□□ 2.79
TRIO-204ENST00000502816 ZNF652Q9Y2D9 606 aa32.49■■■□□ 2.79
TRIO-204ENST00000502816 ADCY9O60503 1353 aa32.48■■■□□ 2.79
TRIO-204ENST00000502816 PRR5LQ6MZQ0 368 aa32.48■■■□□ 2.79
TRIO-204ENST00000502816 DALRD3Q5D0E6 543 aaKnown RBP32.47■■■□□ 2.79
TRIO-204ENST00000502816 BRIP1Q9BX63 1249 aa32.47■■■□□ 2.79
TRIO-204ENST00000502816 PDZRN3Q9UPQ7 1066 aa32.47■■■□□ 2.79
TRIO-204ENST00000502816 ERVV-1B6SEH8 477 aa32.46■■■□□ 2.79
TRIO-204ENST00000502816 APAF1O14727 1248 aa32.45■■■□□ 2.79
TRIO-204ENST00000502816 NUP98P52948 1817 aa32.44■■■□□ 2.78
TRIO-204ENST00000502816 LRP10Q7Z4F1 713 aa32.44■■■□□ 2.78
TRIO-204ENST00000502816 ANP32CO43423 234 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms