RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
USP11-212ENST00000497179 KRT24Q2M2I5 525 aa18.76■□□□□ 0.59
USP11-212ENST00000497179 AK7Q96M32 723 aa18.76■□□□□ 0.59
USP11-212ENST00000497179 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
USP11-212ENST00000497179 MYH14Q7Z406 1995 aaKnown RBP18.75■□□□□ 0.59
USP11-212ENST00000497179 E9PSI1 815 aa18.75■□□□□ 0.59
USP11-212ENST00000497179 HOXB7P09629 217 aa18.75■□□□□ 0.59
USP11-212ENST00000497179 CCDC87Q9NVE4 849 aa18.75■□□□□ 0.59
USP11-212ENST00000497179 INTS5Q6P9B9 1019 aaKnown RBP18.74■□□□□ 0.59
USP11-212ENST00000497179 USP16Q9Y5T5 823 aa18.74■□□□□ 0.59
USP11-212ENST00000497179 GNPATO15228 680 aa18.73■□□□□ 0.59
USP11-212ENST00000497179 SLFN5Q08AF3 891 aa18.73■□□□□ 0.59
USP11-212ENST00000497179 TFCP2L1Q9NZI6 479 aa18.73■□□□□ 0.59
USP11-212ENST00000497179 ZBTB1Q9Y2K1 713 aa18.73■□□□□ 0.59
USP11-212ENST00000497179 SOS1Q07889 1333 aaPredicted RBP18.73■□□□□ 0.59
USP11-212ENST00000497179 RPS6KA4O75676 772 aa18.72■□□□□ 0.59
USP11-212ENST00000497179 R3HDM1Q15032 1099 aaKnown RBP18.72■□□□□ 0.59
USP11-212ENST00000497179 DUSP27Q5VZP5 1158 aa18.72■□□□□ 0.59
USP11-212ENST00000497179 AMIGO3Q86WK7 504 aa18.72■□□□□ 0.59
USP11-212ENST00000497179 C8orf58Q8NAV2 365 aa18.72■□□□□ 0.59
USP11-212ENST00000497179 CASZ1Q86V15 1759 aa18.72■□□□□ 0.59
USP11-212ENST00000497179 PNPLA7Q6ZV29 1317 aa18.72■□□□□ 0.59
USP11-212ENST00000497179 SSFA2P28290 1259 aa18.71■□□□□ 0.59
USP11-212ENST00000497179 TRMT2AQ8IZ69 625 aaKnown RBP18.71■□□□□ 0.59
USP11-212ENST00000497179 CDCA7LQ96GN5 454 aa18.71■□□□□ 0.59
USP11-212ENST00000497179 RTCBQ9Y3I0 505 aaKnown RBP18.71■□□□□ 0.59
USP11-212ENST00000497179 ERBB4Q15303 1308 aa18.71■□□□□ 0.59
USP11-212ENST00000497179 A1BGP04217 495 aa18.7■□□□□ 0.58
USP11-212ENST00000497179 C4AP0C0L4 1744 aa18.69■□□□□ 0.58
USP11-212ENST00000497179 PSDA5PKW4 1024 aaPredicted RBP18.69■□□□□ 0.58
USP11-212ENST00000497179 ADRA2BP18089 450 aa18.69■□□□□ 0.58
USP11-212ENST00000497179 EXOSC9Q06265 439 aaKnown RBP18.69■□□□□ 0.58
USP11-212ENST00000497179 TSPYL6Q8N831 410 aa18.69■□□□□ 0.58
USP11-212ENST00000497179 FLAD1Q8NFF5 587 aa18.69■□□□□ 0.58
USP11-212ENST00000497179 COL15A1P39059 1388 aa18.68■□□□□ 0.58
USP11-212ENST00000497179 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.68■□□□□ 0.58
USP11-212ENST00000497179 NBPF26B4DH59 902 aa18.68■□□□□ 0.58
USP11-212ENST00000497179 CANXP27824 592 aaKnown RBP18.68■□□□□ 0.58
USP11-212ENST00000497179 IL6STP40189 918 aaPredicted RBP18.68■□□□□ 0.58
USP11-212ENST00000497179 EIF5P55010 431 aaKnown RBP18.68■□□□□ 0.58
USP11-212ENST00000497179 TWISTNBQ3B726 338 aaPredicted RBP18.68■□□□□ 0.58
USP11-212ENST00000497179 HDGFL1Q5TGJ6 251 aa18.68■□□□□ 0.58
USP11-212ENST00000497179 NBPF10Q6P3W6 841 aaKnown RBP18.68■□□□□ 0.58
USP11-212ENST00000497179 NBPF15Q8N660 670 aa18.68■□□□□ 0.58
USP11-212ENST00000497179 ELL2O00472 640 aaPredicted RBP18.67■□□□□ 0.58
USP11-212ENST00000497179 PHF14O94880 888 aa18.67■□□□□ 0.58
USP11-212ENST00000497179 EIF2S2P20042 333 aaKnown RBP18.67■□□□□ 0.58
USP11-212ENST00000497179 SMIM5Q71RC9 77 aa18.67■□□□□ 0.58
USP11-212ENST00000497179 COL23A1Q86Y22 540 aaPredicted RBP18.67■□□□□ 0.58
USP11-212ENST00000497179 CHMP4AQ9BY43 222 aa18.66■□□□□ 0.58
USP11-212ENST00000497179 PIP4K2AP48426 406 aaPredicted RBP18.65■□□□□ 0.58
USP11-212ENST00000497179 PDIA6Q15084 440 aa18.65■□□□□ 0.58
USP11-212ENST00000497179 TRAPPC3LQ5T215 181 aa18.65■□□□□ 0.58
USP11-212ENST00000497179 PDGFDQ9GZP0 370 aaPredicted RBP18.65■□□□□ 0.58
USP11-212ENST00000497179 SCN7AQ01118 1682 aa18.65■□□□□ 0.58
USP11-212ENST00000497179 VAMP4O75379 141 aa18.64■□□□□ 0.57
USP11-212ENST00000497179 NECTIN2Q92692 538 aa18.64■□□□□ 0.57
USP11-212ENST00000497179 ARHGEF1Q92888 912 aaKnown RBP18.64■□□□□ 0.57
USP11-212ENST00000497179 DDX21Q9NR30 783 aaKnown RBP eCLIP18.64■□□□□ 0.57
USP11-212ENST00000497179 A0A087WZG4 1122 aa18.63■□□□□ 0.57
USP11-212ENST00000497179 PROSER3Q2NL68 480 aa18.63■□□□□ 0.57
USP11-212ENST00000497179 LRP10Q7Z4F1 713 aa18.63■□□□□ 0.57
USP11-212ENST00000497179 CHPF2Q9P2E5 772 aa18.63■□□□□ 0.57
USP11-212ENST00000497179 DBF4Q9UBU7 674 aaPredicted RBP18.63■□□□□ 0.57
USP11-212ENST00000497179 CCDC30Q5VVM6 783 aa18.62■□□□□ 0.57
USP11-212ENST00000497179 SLC16A10Q8TF71 515 aa18.62■□□□□ 0.57
USP11-212ENST00000497179 USP42Q9H9J4 1324 aaKnown RBP18.62■□□□□ 0.57
USP11-212ENST00000497179 BCORQ6W2J9 1755 aa18.62■□□□□ 0.57
USP11-212ENST00000497179 COL24A1Q17RW2 1714 aa18.61■□□□□ 0.57
USP11-212ENST00000497179 MSH5O43196 834 aa18.61■□□□□ 0.57
USP11-212ENST00000497179 MYL6BP14649 208 aa18.61■□□□□ 0.57
USP11-212ENST00000497179 RFC4P35249 363 aa18.61■□□□□ 0.57
USP11-212ENST00000497179 NPM2Q86SE8 214 aaKnown RBP18.61■□□□□ 0.57
USP11-212ENST00000497179 YTHDC1Q96MU7 727 aaKnown RBP18.61■□□□□ 0.57
USP11-212ENST00000497179 NARFQ9UHQ1 456 aa18.61■□□□□ 0.57
USP11-212ENST00000497179 ZNF330Q9Y3S2 320 aaPredicted RBP18.61■□□□□ 0.57
USP11-212ENST00000497179 ANXA1P04083 346 aa18.6■□□□□ 0.57
USP11-212ENST00000497179 CT47B1P0C2W7 299 aaPredicted RBP18.6■□□□□ 0.57
USP11-212ENST00000497179 DZIP3Q86Y13 1208 aaKnown RBP18.59■□□□□ 0.57
USP11-212ENST00000497179 STK31Q9BXU1 1019 aa18.59■□□□□ 0.57
USP11-212ENST00000497179 HYPKQ9NX55 129 aa18.59■□□□□ 0.57
USP11-212ENST00000497179 SRP68Q9UHB9 627 aaKnown RBP18.59■□□□□ 0.57
USP11-212ENST00000497179 ZNF428Q96B54 188 aa18.58■□□□□ 0.56
USP11-212ENST00000497179 MTFR1LQ9H019 292 aa18.58■□□□□ 0.56
USP11-212ENST00000497179 TBC1D2BQ9UPU7 963 aa18.58■□□□□ 0.56
USP11-212ENST00000497179 ZPR1O75312 459 aa18.57■□□□□ 0.56
USP11-212ENST00000497179 CAMTA2O94983 1202 aa18.57■□□□□ 0.56
USP11-212ENST00000497179 ZBTB7AO95365 584 aa18.57■□□□□ 0.56
USP11-212ENST00000497179 GYS1P13807 737 aa18.57■□□□□ 0.56
USP11-212ENST00000497179 USPL1Q5W0Q7 1092 aa18.57■□□□□ 0.56
USP11-212ENST00000497179 TTLL7Q6ZT98 887 aa18.57■□□□□ 0.56
USP11-212ENST00000497179 TCERG1O14776 1098 aaKnown RBP18.56■□□□□ 0.56
USP11-212ENST00000497179 RGL2O15211 777 aa18.56■□□□□ 0.56
USP11-212ENST00000497179 KIF6Q6ZMV9 814 aa18.56■□□□□ 0.56
USP11-212ENST00000497179 XAGE3Q8WTP9 111 aa18.56■□□□□ 0.56
USP11-212ENST00000497179 MAP3K15Q6ZN16 1313 aa18.55■□□□□ 0.56
USP11-212ENST00000497179 COPS6Q7L5N1 327 aa18.55■□□□□ 0.56
USP11-212ENST00000497179 BCL2L12Q9HB09 334 aa18.55■□□□□ 0.56
USP11-212ENST00000497179 CACNA1FO60840 1977 aa18.54■□□□□ 0.56
USP11-212ENST00000497179 ERVV-1B6SEH8 477 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms