RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 MYH14Q7Z406 1995 aaKnown RBP25.19■■□□□ 1.62
CTDSP1-213ENST00000496785 TSPYL4Q9UJ04 414 aa25.19■■□□□ 1.62
CTDSP1-213ENST00000496785 COL24A1Q17RW2 1714 aa25.19■■□□□ 1.62
CTDSP1-213ENST00000496785 ARHGEF1Q92888 912 aaKnown RBP25.18■■□□□ 1.62
CTDSP1-213ENST00000496785 ARXQ96QS3 562 aa25.18■■□□□ 1.62
CTDSP1-213ENST00000496785 TRIM35Q9UPQ4 493 aa25.18■■□□□ 1.62
CTDSP1-213ENST00000496785 NPM2Q86SE8 214 aaKnown RBP25.17■■□□□ 1.62
CTDSP1-213ENST00000496785 MIS18AQ9NYP9 233 aa25.17■■□□□ 1.62
CTDSP1-213ENST00000496785 ZBTB1Q9Y2K1 713 aa25.17■■□□□ 1.62
CTDSP1-213ENST00000496785 SOS1Q07889 1333 aaPredicted RBP25.16■■□□□ 1.62
CTDSP1-213ENST00000496785 MSL1Q68DK7 614 aa25.15■■□□□ 1.62
CTDSP1-213ENST00000496785 SMIM5Q71RC9 77 aa25.15■■□□□ 1.62
CTDSP1-213ENST00000496785 NLGN1Q8N2Q7 840 aa25.15■■□□□ 1.62
CTDSP1-213ENST00000496785 A0A087WZG4 1122 aa25.14■■□□□ 1.62
CTDSP1-213ENST00000496785 CANXP27824 592 aaKnown RBP25.14■■□□□ 1.62
CTDSP1-213ENST00000496785 EIF4A1P60842 406 aaKnown RBP25.14■■□□□ 1.62
CTDSP1-213ENST00000496785 NCBP3Q53F19 620 aaKnown RBP25.14■■□□□ 1.62
CTDSP1-213ENST00000496785 COL15A1P39059 1388 aa25.14■■□□□ 1.61
CTDSP1-213ENST00000496785 ZPR1O75312 459 aa25.12■■□□□ 1.61
CTDSP1-213ENST00000496785 IL6STP40189 918 aaPredicted RBP25.12■■□□□ 1.61
CTDSP1-213ENST00000496785 FAM9BQ8IZU0 186 aa25.12■■□□□ 1.61
CTDSP1-213ENST00000496785 USP16Q9Y5T5 823 aa25.12■■□□□ 1.61
CTDSP1-213ENST00000496785 C4AP0C0L4 1744 aa25.12■■□□□ 1.61
CTDSP1-213ENST00000496785 USP42Q9H9J4 1324 aaKnown RBP25.12■■□□□ 1.61
CTDSP1-213ENST00000496785 CCER2I3L3R5 266 aa25.11■■□□□ 1.61
CTDSP1-213ENST00000496785 CCDC27Q2M243 656 aa25.11■■□□□ 1.61
CTDSP1-213ENST00000496785 LAMB4A4D0S4 1761 aa25.1■■□□□ 1.61
CTDSP1-213ENST00000496785 CHL1O00533 1208 aa25.1■■□□□ 1.61
CTDSP1-213ENST00000496785 GIGYF1O75420 1035 aaPredicted RBP25.1■■□□□ 1.61
CTDSP1-213ENST00000496785 EIF5P55010 431 aaKnown RBP25.1■■□□□ 1.61
CTDSP1-213ENST00000496785 CFAP44Q96MT7 982 aa25.1■■□□□ 1.61
CTDSP1-213ENST00000496785 LAS1LQ9Y4W2 734 aaKnown RBP25.1■■□□□ 1.61
CTDSP1-213ENST00000496785 SRCAPQ6ZRS2 3230 aa25.09■■□□□ 1.61
CTDSP1-213ENST00000496785 GYS1P13807 737 aa25.09■■□□□ 1.61
CTDSP1-213ENST00000496785 DIEXFQ68CQ4 756 aaKnown RBP25.09■■□□□ 1.61
CTDSP1-213ENST00000496785 NGEFQ8N5V2 710 aa25.09■■□□□ 1.61
CTDSP1-213ENST00000496785 GNAI1P63096 354 aa25.08■■□□□ 1.61
CTDSP1-213ENST00000496785 IFT57Q9NWB7 429 aa25.08■■□□□ 1.61
CTDSP1-213ENST00000496785 NARFQ9UHQ1 456 aa25.08■■□□□ 1.61
CTDSP1-213ENST00000496785 PRAMEF22A3QJZ6 481 aa25.07■■□□□ 1.6
CTDSP1-213ENST00000496785 A1BGP04217 495 aa25.07■■□□□ 1.6
CTDSP1-213ENST00000496785 FHDC1Q9C0D6 1143 aaPredicted RBP25.07■■□□□ 1.6
CTDSP1-213ENST00000496785 ZNF330Q9Y3S2 320 aaPredicted RBP25.07■■□□□ 1.6
CTDSP1-213ENST00000496785 ERBB4Q15303 1308 aa25.06■■□□□ 1.6
CTDSP1-213ENST00000496785 MMP10P09238 476 aa25.05■■□□□ 1.6
CTDSP1-213ENST00000496785 USPL1Q5W0Q7 1092 aa25.05■■□□□ 1.6
CTDSP1-213ENST00000496785 SRP68Q9UHB9 627 aaKnown RBP25.05■■□□□ 1.6
CTDSP1-213ENST00000496785 KLHL34Q8N239 644 aa25.04■■□□□ 1.6
CTDSP1-213ENST00000496785 SYT17Q9BSW7 474 aa25.03■■□□□ 1.6
CTDSP1-213ENST00000496785 PARP3Q9Y6F1 533 aa25.03■■□□□ 1.6
CTDSP1-213ENST00000496785 DCAF8L1A6NGE4 600 aa25.02■■□□□ 1.6
CTDSP1-213ENST00000496785 HOXB7P09629 217 aa25.02■■□□□ 1.6
CTDSP1-213ENST00000496785 ZNF853P0CG23 659 aa25.02■■□□□ 1.6
CTDSP1-213ENST00000496785 WWC1Q8IX03 1113 aa25.02■■□□□ 1.6
CTDSP1-213ENST00000496785 DZIP3Q86Y13 1208 aaKnown RBP25.01■■□□□ 1.59
CTDSP1-213ENST00000496785 MBIPQ9NS73 344 aa25.01■■□□□ 1.59
CTDSP1-213ENST00000496785 CD2APQ9Y5K6 639 aa25.01■■□□□ 1.59
CTDSP1-213ENST00000496785 IL16Q14005 1332 aa25.01■■□□□ 1.59
CTDSP1-213ENST00000496785 FKBP8Q14318 412 aa25■■□□□ 1.59
CTDSP1-213ENST00000496785 CHMP4AQ9BY43 222 aa24.99■■□□□ 1.59
CTDSP1-213ENST00000496785 SCN7AQ01118 1682 aa24.98■■□□□ 1.59
CTDSP1-213ENST00000496785 NBPF26B4DH59 902 aa24.98■■□□□ 1.59
CTDSP1-213ENST00000496785 RGL2O15211 777 aa24.98■■□□□ 1.59
CTDSP1-213ENST00000496785 NBPF10Q6P3W6 841 aaKnown RBP24.98■■□□□ 1.59
CTDSP1-213ENST00000496785 NBPF15Q8N660 670 aa24.98■■□□□ 1.59
CTDSP1-213ENST00000496785 TBC1D2BQ9UPU7 963 aa24.98■■□□□ 1.59
CTDSP1-213ENST00000496785 ZNF652Q9Y2D9 606 aa24.98■■□□□ 1.59
CTDSP1-213ENST00000496785 EIF2S2P20042 333 aaKnown RBP24.97■■□□□ 1.59
CTDSP1-213ENST00000496785 PIP4K2AP48426 406 aaPredicted RBP24.97■■□□□ 1.59
CTDSP1-213ENST00000496785 WDR63Q8IWG1 891 aa24.97■■□□□ 1.59
CTDSP1-213ENST00000496785 CAMTA2O94983 1202 aa24.95■■□□□ 1.58
CTDSP1-213ENST00000496785 TM4SF1P30408 202 aa24.95■■□□□ 1.58
CTDSP1-213ENST00000496785 CLEC4GQ6UXB4 293 aa24.95■■□□□ 1.58
CTDSP1-213ENST00000496785 MYL6BP14649 208 aa24.94■■□□□ 1.58
CTDSP1-213ENST00000496785 BCL2L12Q9HB09 334 aa24.94■■□□□ 1.58
CTDSP1-213ENST00000496785 SALL2Q9Y467 1007 aaPredicted RBP24.94■■□□□ 1.58
CTDSP1-213ENST00000496785 BCORQ6W2J9 1755 aa24.93■■□□□ 1.58
CTDSP1-213ENST00000496785 NFIXQ14938 502 aa24.93■■□□□ 1.58
CTDSP1-213ENST00000496785 HDGFL1Q5TGJ6 251 aa24.93■■□□□ 1.58
CTDSP1-213ENST00000496785 DUSP27Q5VZP5 1158 aa24.93■■□□□ 1.58
CTDSP1-213ENST00000496785 KIF6Q6ZMV9 814 aa24.93■■□□□ 1.58
CTDSP1-213ENST00000496785 SENP3-EIF4A1A0A087X0R7 540 aa24.92■■□□□ 1.58
CTDSP1-213ENST00000496785 POLRMTO00411 1230 aaKnown RBP24.92■■□□□ 1.58
CTDSP1-213ENST00000496785 KRT24Q2M2I5 525 aa24.92■■□□□ 1.58
CTDSP1-213ENST00000496785 C10orf71Q711Q0 1435 aa24.92■■□□□ 1.58
CTDSP1-213ENST00000496785 DDR1Q08345 913 aa24.91■■□□□ 1.58
CTDSP1-213ENST00000496785 CARMIL3Q8ND23 1372 aa24.91■■□□□ 1.58
CTDSP1-213ENST00000496785 ERVV-1B6SEH8 477 aa24.9■■□□□ 1.58
CTDSP1-213ENST00000496785 DDX21Q9NR30 783 aaKnown RBP eCLIP24.9■■□□□ 1.58
CTDSP1-213ENST00000496785 DBF4Q9UBU7 674 aaPredicted RBP24.9■■□□□ 1.58
CTDSP1-213ENST00000496785 TBC1D9BQ66K14 1250 aa24.89■■□□□ 1.58
CTDSP1-213ENST00000496785 BICDL1Q6ZP65 573 aa24.89■■□□□ 1.58
CTDSP1-213ENST00000496785 MIER1Q8N108 512 aa24.89■■□□□ 1.58
CTDSP1-213ENST00000496785 SETDB2Q96T68 719 aa24.89■■□□□ 1.58
CTDSP1-213ENST00000496785 MAP3K15Q6ZN16 1313 aa24.88■■□□□ 1.57
CTDSP1-213ENST00000496785 SERPINB2P05120 415 aa24.88■■□□□ 1.57
CTDSP1-213ENST00000496785 TGFB2P61812 414 aa24.88■■□□□ 1.57
CTDSP1-213ENST00000496785 NLGN2Q8NFZ4 835 aa24.88■■□□□ 1.57
CTDSP1-213ENST00000496785 NECTIN2Q92692 538 aa24.88■■□□□ 1.57
CTDSP1-213ENST00000496785 MYH16Q9H6N6 1097 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms