RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 WASHC2AQ641Q2 1341 aa13.95□□□□□ -0.18
RAB11FIP3-211ENST00000495663 CD163L1Q9NR16 1453 aa13.95□□□□□ -0.18
RAB11FIP3-211ENST00000495663 KRT28Q7Z3Y7 464 aa13.95□□□□□ -0.18
RAB11FIP3-211ENST00000495663 HDGFL2Q7Z4V5 671 aaPredicted RBP13.95□□□□□ -0.18
RAB11FIP3-211ENST00000495663 CPSF1Q10570 1443 aaKnown RBP13.95□□□□□ -0.18
RAB11FIP3-211ENST00000495663 NRKQ7Z2Y5 1582 aa13.95□□□□□ -0.18
RAB11FIP3-211ENST00000495663 ANKRD36BQ8N2N9 1353 aa13.95□□□□□ -0.18
RAB11FIP3-211ENST00000495663 SOS2Q07890 1332 aaPredicted RBP13.94□□□□□ -0.18
RAB11FIP3-211ENST00000495663 USP6P35125 1406 aa13.94□□□□□ -0.18
RAB11FIP3-211ENST00000495663 ZNF697Q5TEC3 545 aa13.94□□□□□ -0.18
RAB11FIP3-211ENST00000495663 A0A1W2PP64 1363 aa13.94□□□□□ -0.18
RAB11FIP3-211ENST00000495663 KTN1Q86UP2 1357 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP3-211ENST00000495663 XPCQ01831 940 aaPredicted RBP13.93□□□□□ -0.18
RAB11FIP3-211ENST00000495663 ZNF598Q86UK7 904 aaKnown RBP13.93□□□□□ -0.18
RAB11FIP3-211ENST00000495663 THAP11Q96EK4 314 aa13.93□□□□□ -0.18
RAB11FIP3-211ENST00000495663 BRD4O60885 1362 aaPredicted RBP13.93□□□□□ -0.18
RAB11FIP3-211ENST00000495663 ALS2Q96Q42 1657 aa13.92□□□□□ -0.18
RAB11FIP3-211ENST00000495663 IRF6O14896 467 aa13.92□□□□□ -0.18
RAB11FIP3-211ENST00000495663 HSPA1LP34931 641 aa13.92□□□□□ -0.18
RAB11FIP3-211ENST00000495663 MDM2Q00987 491 aaPredicted RBP13.92□□□□□ -0.18
RAB11FIP3-211ENST00000495663 PRDM9Q9NQV7 894 aa13.92□□□□□ -0.18
RAB11FIP3-211ENST00000495663 SBNO1A3KN83 1393 aa13.92□□□□□ -0.18
RAB11FIP3-211ENST00000495663 LRRC59Q96AG4 307 aaKnown RBP13.91□□□□□ -0.18
RAB11FIP3-211ENST00000495663 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
RAB11FIP3-211ENST00000495663 TNS3Q68CZ2 1445 aa13.9□□□□□ -0.18
RAB11FIP3-211ENST00000495663 EDC4Q6P2E9 1401 aaKnown RBP13.9□□□□□ -0.18
RAB11FIP3-211ENST00000495663 TNFRSF10AO00220 468 aa13.9□□□□□ -0.18
RAB11FIP3-211ENST00000495663 FMNL1O95466 1100 aaPredicted RBP13.9□□□□□ -0.18
RAB11FIP3-211ENST00000495663 FAM160A2Q8N612 972 aaPredicted RBP13.9□□□□□ -0.18
RAB11FIP3-211ENST00000495663 CCDC102AQ96A19 550 aa13.9□□□□□ -0.18
RAB11FIP3-211ENST00000495663 KIF20BQ96Q89 1820 aa13.9□□□□□ -0.18
RAB11FIP3-211ENST00000495663 SSH2Q76I76 1423 aa13.9□□□□□ -0.19
RAB11FIP3-211ENST00000495663 SPATA31A3Q5VYP0 1347 aa13.9□□□□□ -0.19
RAB11FIP3-211ENST00000495663 RNF19BQ6ZMZ0 732 aa13.89□□□□□ -0.19
RAB11FIP3-211ENST00000495663 FCF1Q9Y324 198 aaKnown RBP13.89□□□□□ -0.19
RAB11FIP3-211ENST00000495663 PIK3C2AO00443 1686 aa13.88□□□□□ -0.19
RAB11FIP3-211ENST00000495663 ARHGEF10O15013 1369 aa13.88□□□□□ -0.19
RAB11FIP3-211ENST00000495663 CD46P15529 392 aa13.88□□□□□ -0.19
RAB11FIP3-211ENST00000495663 PANK3Q9H999 370 aa13.88□□□□□ -0.19
RAB11FIP3-211ENST00000495663 COL22A1Q8NFW1 1626 aaPredicted RBP13.88□□□□□ -0.19
RAB11FIP3-211ENST00000495663 TTC21BQ7Z4L5 1316 aa13.88□□□□□ -0.19
RAB11FIP3-211ENST00000495663 TTC21AQ8NDW8 1320 aa13.88□□□□□ -0.19
RAB11FIP3-211ENST00000495663 JCADQ9P266 1359 aa13.87□□□□□ -0.19
RAB11FIP3-211ENST00000495663 LMOD2Q6P5Q4 547 aa13.87□□□□□ -0.19
RAB11FIP3-211ENST00000495663 NSD3Q9BZ95 1437 aa13.87□□□□□ -0.19
RAB11FIP3-211ENST00000495663 USP54Q70EL1 1684 aa13.86□□□□□ -0.19
RAB11FIP3-211ENST00000495663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.86□□□□□ -0.19
RAB11FIP3-211ENST00000495663 ABTB2Q8N961 1025 aa13.86□□□□□ -0.19
RAB11FIP3-211ENST00000495663 PNPLA6Q8IY17 1366 aa13.85□□□□□ -0.19
RAB11FIP3-211ENST00000495663 ABCA3Q99758 1704 aa13.85□□□□□ -0.19
RAB11FIP3-211ENST00000495663 ANKRD26Q9UPS8 1709 aa13.85□□□□□ -0.19
RAB11FIP3-211ENST00000495663 CRYBG1Q9Y4K1 1723 aa13.85□□□□□ -0.19
RAB11FIP3-211ENST00000495663 MED1Q15648 1581 aaPredicted RBP13.85□□□□□ -0.19
RAB11FIP3-211ENST00000495663 BRICD5Q6PL45 260 aa13.85□□□□□ -0.19
RAB11FIP3-211ENST00000495663 CARD14Q9BXL6 1004 aa13.85□□□□□ -0.19
RAB11FIP3-211ENST00000495663 MARF1Q9Y4F3 1742 aaKnown RBP13.84□□□□□ -0.19
RAB11FIP3-211ENST00000495663 PHRF1Q9P1Y6 1649 aaKnown RBP13.84□□□□□ -0.19
RAB11FIP3-211ENST00000495663 GDF9O60383 454 aa13.83□□□□□ -0.2
RAB11FIP3-211ENST00000495663 FOXC1Q12948 553 aa13.83□□□□□ -0.2
RAB11FIP3-211ENST00000495663 GRIPAP1Q4V328 841 aa13.83□□□□□ -0.2
RAB11FIP3-211ENST00000495663 PKDCCQ504Y2 493 aa13.83□□□□□ -0.2
RAB11FIP3-211ENST00000495663 NLRP13Q86W25 1043 aa13.83□□□□□ -0.2
RAB11FIP3-211ENST00000495663 HLA-CQ95604 372 aa13.83□□□□□ -0.2
RAB11FIP3-211ENST00000495663 KNSTRNQ9Y448 316 aa13.83□□□□□ -0.2
RAB11FIP3-211ENST00000495663 PRR20EP86478 221 aa13.82□□□□□ -0.2
RAB11FIP3-211ENST00000495663 PRR20CP86479 221 aa13.82□□□□□ -0.2
RAB11FIP3-211ENST00000495663 PRR20DP86480 221 aa13.82□□□□□ -0.2
RAB11FIP3-211ENST00000495663 PRR20BP86481 221 aa13.82□□□□□ -0.2
RAB11FIP3-211ENST00000495663 PRR20AP86496 221 aa13.82□□□□□ -0.2
RAB11FIP3-211ENST00000495663 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.82□□□□□ -0.2
RAB11FIP3-211ENST00000495663 NME9Q86XW9 330 aa13.82□□□□□ -0.2
RAB11FIP3-211ENST00000495663 CGNL1Q0VF96 1302 aa13.82□□□□□ -0.2
RAB11FIP3-211ENST00000495663 FAM187AA6NFU0 413 aa13.81□□□□□ -0.2
RAB11FIP3-211ENST00000495663 KDM4AO75164 1064 aa13.81□□□□□ -0.2
RAB11FIP3-211ENST00000495663 DDX10Q13206 875 aaKnown RBP13.81□□□□□ -0.2
RAB11FIP3-211ENST00000495663 NUTM2GQ5VZR2 741 aa13.81□□□□□ -0.2
RAB11FIP3-211ENST00000495663 SALL2Q9Y467 1007 aaPredicted RBP13.81□□□□□ -0.2
RAB11FIP3-211ENST00000495663 SPATA31A6Q5VVP1 1343 aa13.81□□□□□ -0.2
RAB11FIP3-211ENST00000495663 USP31Q70CQ4 1352 aa13.81□□□□□ -0.2
RAB11FIP3-211ENST00000495663 FYB1O15117 783 aa13.8□□□□□ -0.2
RAB11FIP3-211ENST00000495663 PER1O15534 1290 aaPredicted RBP13.8□□□□□ -0.2
RAB11FIP3-211ENST00000495663 NSD2O96028 1365 aa13.8□□□□□ -0.2
RAB11FIP3-211ENST00000495663 OVOS2A0A0J9YW53 1432 aa13.8□□□□□ -0.2
RAB11FIP3-211ENST00000495663 OVOS2Q6IE36 1432 aa13.8□□□□□ -0.2
RAB11FIP3-211ENST00000495663 SLIT3O75094 1523 aa13.8□□□□□ -0.2
RAB11FIP3-211ENST00000495663 COG3Q96JB2 828 aa13.79□□□□□ -0.2
RAB11FIP3-211ENST00000495663 USP19O94966 1318 aa13.79□□□□□ -0.2
RAB11FIP3-211ENST00000495663 CABLES1Q8TDN4 633 aa13.78□□□□□ -0.2
RAB11FIP3-211ENST00000495663 GGNBP2Q9H3C7 697 aa13.78□□□□□ -0.2
RAB11FIP3-211ENST00000495663 Q3C1V9 767 aa13.77□□□□□ -0.21
RAB11FIP3-211ENST00000495663 MSS51Q4VC12 460 aa13.77□□□□□ -0.21
RAB11FIP3-211ENST00000495663 KCNH5Q8NCM2 988 aa13.77□□□□□ -0.21
RAB11FIP3-211ENST00000495663 GPCPD1Q9NPB8 672 aa13.77□□□□□ -0.21
RAB11FIP3-211ENST00000495663 PKD2L1Q9P0L9 805 aa13.77□□□□□ -0.21
RAB11FIP3-211ENST00000495663 LTN1O94822 1766 aa13.76□□□□□ -0.21
RAB11FIP3-211ENST00000495663 NPC1L1Q9UHC9 1359 aa13.76□□□□□ -0.21
RAB11FIP3-211ENST00000495663 NUTM2BA6NNL0 878 aaPredicted RBP13.76□□□□□ -0.21
RAB11FIP3-211ENST00000495663 NUTM2EB1AL46 878 aaPredicted RBP13.76□□□□□ -0.21
RAB11FIP3-211ENST00000495663 RPIAP49247 311 aa13.76□□□□□ -0.21
RAB11FIP3-211ENST00000495663 MYT1Q01538 1121 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms