RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 DEFB132Q7Z7B7 95 aa8.64□□□□□ -1.03
EPHA3-203ENST00000494014 PKD1L3Q7Z443 1732 aa8.64□□□□□ -1.03
EPHA3-203ENST00000494014 FEZ1Q99689 392 aa8.64□□□□□ -1.03
EPHA3-203ENST00000494014 EP400Q96L91 3159 aa8.63□□□□□ -1.03
EPHA3-203ENST00000494014 LMBRD1Q9NUN5 540 aa8.63□□□□□ -1.03
EPHA3-203ENST00000494014 MYOM1P52179 1685 aa8.63□□□□□ -1.03
EPHA3-203ENST00000494014 PTMAP06454 111 aaKnown RBP8.63□□□□□ -1.03
EPHA3-203ENST00000494014 PRIM1P49642 420 aaKnown RBP8.63□□□□□ -1.03
EPHA3-203ENST00000494014 SLC20A2Q08357 652 aa8.63□□□□□ -1.03
EPHA3-203ENST00000494014 GABPB1Q06547 395 aaPredicted RBP8.62□□□□□ -1.03
EPHA3-203ENST00000494014 ATP2B3Q16720 1220 aa8.62□□□□□ -1.03
EPHA3-203ENST00000494014 LARP1Q6PKG0 1096 aaKnown RBP8.62□□□□□ -1.03
EPHA3-203ENST00000494014 WWC1Q8IX03 1113 aa8.62□□□□□ -1.03
EPHA3-203ENST00000494014 PDCL2Q8N4E4 241 aa8.62□□□□□ -1.03
EPHA3-203ENST00000494014 PIBF1Q8WXW3 757 aa8.62□□□□□ -1.03
EPHA3-203ENST00000494014 CICQ96RK0 1608 aaPredicted RBP8.62□□□□□ -1.03
EPHA3-203ENST00000494014 RLBP1P12271 317 aa8.62□□□□□ -1.03
EPHA3-203ENST00000494014 MCTP1Q6DN14 999 aa8.62□□□□□ -1.03
EPHA3-203ENST00000494014 CABP1Q9NZU7 370 aa8.62□□□□□ -1.03
EPHA3-203ENST00000494014 CCDC9Q9Y3X0 531 aaKnown RBP8.62□□□□□ -1.03
EPHA3-203ENST00000494014 SRPK2P78362 688 aaKnown RBP8.62□□□□□ -1.03
EPHA3-203ENST00000494014 NSD2O96028 1365 aa8.61□□□□□ -1.03
EPHA3-203ENST00000494014 AK9Q5TCS8 1911 aa8.61□□□□□ -1.03
EPHA3-203ENST00000494014 CCDC66A2RUB6 948 aa8.61□□□□□ -1.03
EPHA3-203ENST00000494014 HMGB2P26583 209 aaKnown RBP8.61□□□□□ -1.03
EPHA3-203ENST00000494014 LMOD2Q6P5Q4 547 aa8.61□□□□□ -1.03
EPHA3-203ENST00000494014 KIF2CQ99661 725 aa8.61□□□□□ -1.03
EPHA3-203ENST00000494014 CYP2E1P05181 493 aaPredicted RBP8.61□□□□□ -1.03
EPHA3-203ENST00000494014 WDR63Q8IWG1 891 aa8.61□□□□□ -1.03
EPHA3-203ENST00000494014 GAS2L2Q8NHY3 880 aa8.61□□□□□ -1.03
EPHA3-203ENST00000494014 CWC22Q9HCG8 908 aaKnown RBP8.61□□□□□ -1.03
EPHA3-203ENST00000494014 CABP2Q9NPB3 220 aa8.61□□□□□ -1.03
EPHA3-203ENST00000494014 DIAPH3Q9NSV4 1193 aa8.61□□□□□ -1.03
EPHA3-203ENST00000494014 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.61□□□□□ -1.03
EPHA3-203ENST00000494014 TUBGCP6Q96RT7 1819 aa8.61□□□□□ -1.03
EPHA3-203ENST00000494014 MBD3O95983 291 aa8.6□□□□□ -1.03
EPHA3-203ENST00000494014 CT47B1P0C2W7 299 aaPredicted RBP8.6□□□□□ -1.03
EPHA3-203ENST00000494014 EVA1CP58658 441 aa8.6□□□□□ -1.03
EPHA3-203ENST00000494014 BMP2KLQ5H9B9 411 aa8.6□□□□□ -1.03
EPHA3-203ENST00000494014 NBPF14Q5TI25 921 aa8.6□□□□□ -1.03
EPHA3-203ENST00000494014 ZKSCAN2Q63HK3 967 aa8.6□□□□□ -1.03
EPHA3-203ENST00000494014 ZNF771Q7L3S4 317 aaPredicted RBP8.6□□□□□ -1.03
EPHA3-203ENST00000494014 CFAP44Q96MT7 982 aa8.6□□□□□ -1.03
EPHA3-203ENST00000494014 EN1Q05925 392 aaPredicted RBP8.6□□□□□ -1.03
EPHA3-203ENST00000494014 NOLC1Q14978 699 aaKnown RBP eCLIP8.6□□□□□ -1.03
EPHA3-203ENST00000494014 BCL2L12Q9HB09 334 aa8.6□□□□□ -1.03
EPHA3-203ENST00000494014 OGFRQ9NZT2 677 aa8.6□□□□□ -1.03
EPHA3-203ENST00000494014 CGNQ9P2M7 1197 aaKnown RBP8.6□□□□□ -1.03
EPHA3-203ENST00000494014 DDX19BQ9UMR2 479 aa8.6□□□□□ -1.03
EPHA3-203ENST00000494014 EZH2Q15910 746 aaKnown RBP8.6□□□□□ -1.03
EPHA3-203ENST00000494014 FTSJ3Q8IY81 847 aaKnown RBP8.6□□□□□ -1.03
EPHA3-203ENST00000494014 DZIP1LQ8IYY4 767 aaKnown RBP8.6□□□□□ -1.03
EPHA3-203ENST00000494014 DNAJC2Q99543 621 aaKnown RBP8.6□□□□□ -1.03
EPHA3-203ENST00000494014 ANKRD36BQ8N2N9 1353 aa8.59□□□□□ -1.03
EPHA3-203ENST00000494014 CHAF1AQ13111 956 aaPredicted RBP8.59□□□□□ -1.03
EPHA3-203ENST00000494014 FKBP5Q13451 457 aaPredicted RBP8.59□□□□□ -1.03
EPHA3-203ENST00000494014 CHRNA2Q15822 529 aa8.59□□□□□ -1.03
EPHA3-203ENST00000494014 UVSSAQ2YD98 709 aa8.59□□□□□ -1.03
EPHA3-203ENST00000494014 ANKRD7Q92527 254 aa8.59□□□□□ -1.03
EPHA3-203ENST00000494014 SPTLC3Q9NUV7 552 aa8.59□□□□□ -1.03
EPHA3-203ENST00000494014 DOT1LQ8TEK3 1739 aa8.59□□□□□ -1.03
EPHA3-203ENST00000494014 ERBB3P21860 1342 aa8.59□□□□□ -1.03
EPHA3-203ENST00000494014 NLRP6P59044 892 aa8.59□□□□□ -1.03
EPHA3-203ENST00000494014 ZC3H6P61129 1189 aaKnown RBP8.59□□□□□ -1.03
EPHA3-203ENST00000494014 ZNF830Q96NB3 372 aaPredicted RBP8.59□□□□□ -1.03
EPHA3-203ENST00000494014 FOXD4L1Q9NU39 408 aa8.59□□□□□ -1.03
EPHA3-203ENST00000494014 RABEP1Q15276 862 aa8.58□□□□□ -1.04
EPHA3-203ENST00000494014 FAM184AQ8NB25 1140 aa8.58□□□□□ -1.04
EPHA3-203ENST00000494014 FAM193AP78312 1265 aa8.58□□□□□ -1.04
EPHA3-203ENST00000494014 SYCP1Q15431 976 aa8.58□□□□□ -1.04
EPHA3-203ENST00000494014 SYAP1Q96A49 352 aaPredicted RBP8.58□□□□□ -1.04
EPHA3-203ENST00000494014 A0A1W2PP64 1363 aa8.58□□□□□ -1.04
EPHA3-203ENST00000494014 TRIM37O94972 964 aa8.57□□□□□ -1.04
EPHA3-203ENST00000494014 CD2BP2O95400 341 aaKnown RBP8.57□□□□□ -1.04
EPHA3-203ENST00000494014 APBA3O96018 575 aa8.57□□□□□ -1.04
EPHA3-203ENST00000494014 NUCB1Q02818 461 aa8.57□□□□□ -1.04
EPHA3-203ENST00000494014 DDB1Q16531 1140 aa8.57□□□□□ -1.04
EPHA3-203ENST00000494014 CCDC27Q2M243 656 aa8.57□□□□□ -1.04
EPHA3-203ENST00000494014 TSPY26PQ9H489 355 aa8.57□□□□□ -1.04
EPHA3-203ENST00000494014 TAF1LQ8IZX4 1826 aa8.57□□□□□ -1.04
EPHA3-203ENST00000494014 GPT2Q8TD30 523 aa8.57□□□□□ -1.04
EPHA3-203ENST00000494014 TSPYL1Q9H0U9 437 aa8.57□□□□□ -1.04
EPHA3-203ENST00000494014 TNNQ9UQP3 1299 aa8.57□□□□□ -1.04
EPHA3-203ENST00000494014 PHF14O94880 888 aa8.57□□□□□ -1.04
EPHA3-203ENST00000494014 STRN4Q9NRL3 753 aa8.57□□□□□ -1.04
EPHA3-203ENST00000494014 CHD4Q14839 1912 aa8.56□□□□□ -1.04
EPHA3-203ENST00000494014 SYCE3A1L190 88 aa8.56□□□□□ -1.04
EPHA3-203ENST00000494014 KCNQ2O43526 872 aa8.56□□□□□ -1.04
EPHA3-203ENST00000494014 PRPF40AO75400 957 aaKnown RBP8.56□□□□□ -1.04
EPHA3-203ENST00000494014 CREBRFQ8IUR6 639 aa8.56□□□□□ -1.04
EPHA3-203ENST00000494014 MARCH10Q8NA82 808 aaPredicted RBP8.56□□□□□ -1.04
EPHA3-203ENST00000494014 RUNDC1Q96C34 613 aa8.56□□□□□ -1.04
EPHA3-203ENST00000494014 TERF2IPQ9NYB0 399 aa8.56□□□□□ -1.04
EPHA3-203ENST00000494014 TMEM63CQ9P1W3 806 aa8.56□□□□□ -1.04
EPHA3-203ENST00000494014 AXIN2Q9Y2T1 843 aa8.56□□□□□ -1.04
EPHA3-203ENST00000494014 C5P01031 1676 aa8.56□□□□□ -1.04
EPHA3-203ENST00000494014 SPDYE4A6NLX3 237 aa8.56□□□□□ -1.04
EPHA3-203ENST00000494014 CTIFO43310 598 aaKnown RBP8.56□□□□□ -1.04
EPHA3-203ENST00000494014 TPM3P06753 285 aa8.56□□□□□ -1.04
EPHA3-203ENST00000494014 HDGFL2Q7Z4V5 671 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms