RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PDE1AP54750 535 aa23.39■■□□□ 1.33
SNAPC3-206ENST00000490969 ABTB2Q8N961 1025 aa23.39■■□□□ 1.33
SNAPC3-206ENST00000490969 FOXO3O43524 673 aa23.38■■□□□ 1.33
SNAPC3-206ENST00000490969 FOXD4L6Q3SYB3 417 aaPredicted RBP23.38■■□□□ 1.33
SNAPC3-206ENST00000490969 FOXD4L3Q6VB84 417 aaPredicted RBP23.38■■□□□ 1.33
SNAPC3-206ENST00000490969 MEIS3Q99687 375 aa23.38■■□□□ 1.33
SNAPC3-206ENST00000490969 NOL8Q76FK4 1167 aaKnown RBP23.38■■□□□ 1.33
SNAPC3-206ENST00000490969 USP48Q86UV5 1035 aa23.38■■□□□ 1.33
SNAPC3-206ENST00000490969 TTC12Q9H892 705 aaPredicted RBP23.38■■□□□ 1.33
SNAPC3-206ENST00000490969 LMTK3Q96Q04 1460 aa23.38■■□□□ 1.33
SNAPC3-206ENST00000490969 PLEKHG5O94827 1062 aa23.37■■□□□ 1.33
SNAPC3-206ENST00000490969 DCTN1Q14203 1278 aa23.37■■□□□ 1.33
SNAPC3-206ENST00000490969 PALD1Q9ULE6 856 aa23.37■■□□□ 1.33
SNAPC3-206ENST00000490969 MCCP23508 829 aa23.37■■□□□ 1.33
SNAPC3-206ENST00000490969 ESYT1Q9BSJ8 1104 aa23.37■■□□□ 1.33
SNAPC3-206ENST00000490969 ADCY5O95622 1261 aa23.36■■□□□ 1.33
SNAPC3-206ENST00000490969 KRT24Q2M2I5 525 aa23.36■■□□□ 1.33
SNAPC3-206ENST00000490969 C17orf53Q8N3J3 647 aaPredicted RBP23.36■■□□□ 1.33
SNAPC3-206ENST00000490969 SPTLC3Q9NUV7 552 aa23.36■■□□□ 1.33
SNAPC3-206ENST00000490969 FKBP5Q13451 457 aaPredicted RBP23.36■■□□□ 1.33
SNAPC3-206ENST00000490969 KIF3AQ9Y496 699 aa23.36■■□□□ 1.33
SNAPC3-206ENST00000490969 TMEM94Q12767 1356 aa23.36■■□□□ 1.33
SNAPC3-206ENST00000490969 HMMRO75330 724 aa23.35■■□□□ 1.33
SNAPC3-206ENST00000490969 ANAPC15P60006 121 aa23.35■■□□□ 1.33
SNAPC3-206ENST00000490969 CCDC183Q5T5S1 534 aa23.34■■□□□ 1.33
SNAPC3-206ENST00000490969 WDR33Q9C0J8 1336 aaKnown RBP23.34■■□□□ 1.33
SNAPC3-206ENST00000490969 CBX1P83916 185 aa23.33■■□□□ 1.33
SNAPC3-206ENST00000490969 PSME1Q06323 249 aa23.33■■□□□ 1.33
SNAPC3-206ENST00000490969 HAP1P54257 671 aaPredicted RBP23.33■■□□□ 1.33
SNAPC3-206ENST00000490969 DDX17Q92841 729 aaKnown RBP23.33■■□□□ 1.33
SNAPC3-206ENST00000490969 PPP4R3BQ5MIZ7 849 aa23.32■■□□□ 1.32
SNAPC3-206ENST00000490969 PTPRCP08575 1304 aa23.32■■□□□ 1.32
SNAPC3-206ENST00000490969 STRCQ7RTU9 1775 aa23.32■■□□□ 1.32
SNAPC3-206ENST00000490969 TCHHQ07283 1943 aa23.32■■□□□ 1.32
SNAPC3-206ENST00000490969 TMEM87AQ8NBN3 555 aa23.32■■□□□ 1.32
SNAPC3-206ENST00000490969 C19orf44Q9H6X5 657 aa23.32■■□□□ 1.32
SNAPC3-206ENST00000490969 FAM177BA6PVY3 158 aa23.31■■□□□ 1.32
SNAPC3-206ENST00000490969 HCLS1P14317 486 aaPredicted RBP23.31■■□□□ 1.32
SNAPC3-206ENST00000490969 ATP2B3Q16720 1220 aa23.31■■□□□ 1.32
SNAPC3-206ENST00000490969 TSHZ3Q63HK5 1081 aa23.31■■□□□ 1.32
SNAPC3-206ENST00000490969 SULT6B1Q6IMI4 303 aa23.31■■□□□ 1.32
SNAPC3-206ENST00000490969 GTPBP4Q9BZE4 634 aaKnown RBP23.31■■□□□ 1.32
SNAPC3-206ENST00000490969 ANO2Q9NQ90 1003 aa23.31■■□□□ 1.32
SNAPC3-206ENST00000490969 BCL2L12Q9HB09 334 aa23.3■■□□□ 1.32
SNAPC3-206ENST00000490969 LETM1O95202 739 aaPredicted RBP23.29■■□□□ 1.32
SNAPC3-206ENST00000490969 MX1P20591 662 aa23.29■■□□□ 1.32
SNAPC3-206ENST00000490969 UPF3BQ9BZI7 483 aaKnown RBP23.29■■□□□ 1.32
SNAPC3-206ENST00000490969 SRCIN1Q9C0H9 1055 aa23.29■■□□□ 1.32
SNAPC3-206ENST00000490969 IL17RAQ96F46 866 aa23.28■■□□□ 1.32
SNAPC3-206ENST00000490969 TUBGCP6Q96RT7 1819 aa23.28■■□□□ 1.32
SNAPC3-206ENST00000490969 C1orf167Q5SNV9 1468 aa23.28■■□□□ 1.32
SNAPC3-206ENST00000490969 SALL3Q9BXA9 1300 aa23.28■■□□□ 1.32
SNAPC3-206ENST00000490969 KDM4AO75164 1064 aa23.28■■□□□ 1.32
SNAPC3-206ENST00000490969 CHMLP26374 656 aa23.28■■□□□ 1.32
SNAPC3-206ENST00000490969 AMPHP49418 695 aa23.28■■□□□ 1.32
SNAPC3-206ENST00000490969 RPAP1Q9BWH6 1393 aaPredicted RBP23.28■■□□□ 1.32
SNAPC3-206ENST00000490969 KIAA0232Q92628 1395 aa23.27■■□□□ 1.32
SNAPC3-206ENST00000490969 CNPY2Q9Y2B0 182 aa23.26■■□□□ 1.31
SNAPC3-206ENST00000490969 EXOC6BQ9Y2D4 811 aa23.26■■□□□ 1.31
SNAPC3-206ENST00000490969 SBNO1A3KN83 1393 aa23.26■■□□□ 1.31
SNAPC3-206ENST00000490969 CHL1O00533 1208 aa23.25■■□□□ 1.31
SNAPC3-206ENST00000490969 PDCL2Q8N4E4 241 aa23.25■■□□□ 1.31
SNAPC3-206ENST00000490969 FLT4P35916 1363 aa23.25■■□□□ 1.31
SNAPC3-206ENST00000490969 LMOD2Q6P5Q4 547 aa23.24■■□□□ 1.31
SNAPC3-206ENST00000490969 KIAA1524Q8TCG1 905 aa23.24■■□□□ 1.31
SNAPC3-206ENST00000490969 RILPL2Q969X0 211 aa23.24■■□□□ 1.31
SNAPC3-206ENST00000490969 ZNF335Q9H4Z2 1342 aaPredicted RBP23.24■■□□□ 1.31
SNAPC3-206ENST00000490969 TRIM6-TRIM34B2RNG4 842 aa23.24■■□□□ 1.31
SNAPC3-206ENST00000490969 HOXC9P31274 260 aa23.24■■□□□ 1.31
SNAPC3-206ENST00000490969 UBE2HP62256 183 aa23.24■■□□□ 1.31
SNAPC3-206ENST00000490969 LTV1Q96GA3 475 aaPredicted RBP23.24■■□□□ 1.31
SNAPC3-206ENST00000490969 DIAPH3Q9NSV4 1193 aa23.24■■□□□ 1.31
SNAPC3-206ENST00000490969 RGPD1P0DJD0 1748 aa23.24■■□□□ 1.31
SNAPC3-206ENST00000490969 KIF20AO95235 890 aa23.23■■□□□ 1.31
SNAPC3-206ENST00000490969 TPRNQ4KMQ1 711 aa23.23■■□□□ 1.31
SNAPC3-206ENST00000490969 EYA1Q99502 592 aa23.23■■□□□ 1.31
SNAPC3-206ENST00000490969 MST1RQ04912 1400 aa23.23■■□□□ 1.31
SNAPC3-206ENST00000490969 SLC4A2P04920 1241 aa23.22■■□□□ 1.31
SNAPC3-206ENST00000490969 CHAF1AQ13111 956 aaPredicted RBP23.22■■□□□ 1.31
SNAPC3-206ENST00000490969 LRRCC1Q9C099 1032 aa23.22■■□□□ 1.31
SNAPC3-206ENST00000490969 ATF3P18847 181 aa23.22■■□□□ 1.31
SNAPC3-206ENST00000490969 PLCB2Q00722 1185 aa23.22■■□□□ 1.31
SNAPC3-206ENST00000490969 KCNF1Q9H3M0 494 aa23.22■■□□□ 1.31
SNAPC3-206ENST00000490969 RIOK3O14730 519 aaKnown RBP23.21■■□□□ 1.31
SNAPC3-206ENST00000490969 ZSCAN22P10073 491 aaPredicted RBP23.21■■□□□ 1.31
SNAPC3-206ENST00000490969 KRT28Q7Z3Y7 464 aa23.21■■□□□ 1.31
SNAPC3-206ENST00000490969 FUCA2Q9BTY2 467 aa23.21■■□□□ 1.31
SNAPC3-206ENST00000490969 PYCARDQ9ULZ3 195 aa23.21■■□□□ 1.31
SNAPC3-206ENST00000490969 XIRP1Q702N8 1843 aaKnown RBP23.21■■□□□ 1.31
SNAPC3-206ENST00000490969 SLC4A10Q6U841 1118 aa23.21■■□□□ 1.31
SNAPC3-206ENST00000490969 USP54Q70EL1 1684 aa23.2■■□□□ 1.31
SNAPC3-206ENST00000490969 ANKRD7Q92527 254 aa23.2■■□□□ 1.3
SNAPC3-206ENST00000490969 SPDYE4A6NLX3 237 aa23.2■■□□□ 1.3
SNAPC3-206ENST00000490969 TPM3P06753 285 aa23.2■■□□□ 1.3
SNAPC3-206ENST00000490969 CCT4P50991 539 aaKnown RBP23.2■■□□□ 1.3
SNAPC3-206ENST00000490969 AP5Z1O43299 807 aa23.19■■□□□ 1.3
SNAPC3-206ENST00000490969 GNAI2P04899 355 aa23.19■■□□□ 1.3
SNAPC3-206ENST00000490969 F6X3S4 739 aa23.19■■□□□ 1.3
SNAPC3-206ENST00000490969 HSPA4P34932 840 aa23.19■■□□□ 1.3
SNAPC3-206ENST00000490969 MCM10Q7L590 875 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms