RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 MYH14Q7Z406 1995 aaKnown RBP17.84■□□□□ 0.45
C9orf3-221ENST00000489562 PRAMEF22A3QJZ6 481 aa17.83■□□□□ 0.44
C9orf3-221ENST00000489562 TXNRD1Q16881 649 aa17.83■□□□□ 0.44
C9orf3-221ENST00000489562 RCAN3Q9UKA8 241 aa17.83■□□□□ 0.44
C9orf3-221ENST00000489562 USP16Q9Y5T5 823 aa17.83■□□□□ 0.44
C9orf3-221ENST00000489562 C4BP0C0L5 1744 aa17.83■□□□□ 0.44
C9orf3-221ENST00000489562 CYP19A1P11511 503 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-221ENST00000489562 EIF2S2P20042 333 aaKnown RBP17.82■□□□□ 0.44
C9orf3-221ENST00000489562 RARSP54136 660 aaKnown RBP17.82■□□□□ 0.44
C9orf3-221ENST00000489562 ITPK1Q13572 414 aa17.82■□□□□ 0.44
C9orf3-221ENST00000489562 DBF4Q9UBU7 674 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-221ENST00000489562 CNTNAP4Q9C0A0 1308 aa17.81■□□□□ 0.44
C9orf3-221ENST00000489562 BRPF1P55201 1214 aaPredicted RBP17.8■□□□□ 0.44
C9orf3-221ENST00000489562 RC3H1Q5TC82 1133 aaKnown RBP17.8■□□□□ 0.44
C9orf3-221ENST00000489562 DDX21Q9NR30 783 aaKnown RBP eCLIP17.8■□□□□ 0.44
C9orf3-221ENST00000489562 NUP188Q5SRE5 1749 aa17.8■□□□□ 0.44
C9orf3-221ENST00000489562 LINC00116Q8NCU8 138 aa17.79■□□□□ 0.44
C9orf3-221ENST00000489562 SSH1Q8WYL5 1049 aa17.79■□□□□ 0.44
C9orf3-221ENST00000489562 NECTIN2Q92692 538 aa17.79■□□□□ 0.44
C9orf3-221ENST00000489562 CAMKK2Q96RR4 588 aa17.79■□□□□ 0.44
C9orf3-221ENST00000489562 SMC4Q9NTJ3 1288 aa17.79■□□□□ 0.44
C9orf3-221ENST00000489562 CCDC87Q9NVE4 849 aa17.79■□□□□ 0.44
C9orf3-221ENST00000489562 UBR3Q6ZT12 1888 aa17.79■□□□□ 0.44
C9orf3-221ENST00000489562 CRKLP46109 303 aaKnown RBP17.78■□□□□ 0.44
C9orf3-221ENST00000489562 EN1Q05925 392 aaPredicted RBP17.78■□□□□ 0.44
C9orf3-221ENST00000489562 PROM2Q8N271 834 aa17.78■□□□□ 0.44
C9orf3-221ENST00000489562 UPF1Q92900 1129 aaKnown RBP eCLIP17.78■□□□□ 0.44
C9orf3-221ENST00000489562 LRRC4BQ9NT99 713 aa17.78■□□□□ 0.44
C9orf3-221ENST00000489562 HYPKQ9NX55 129 aa17.78■□□□□ 0.44
C9orf3-221ENST00000489562 CHPF2Q9P2E5 772 aa17.78■□□□□ 0.44
C9orf3-221ENST00000489562 KIF16BQ96L93 1317 aa17.77■□□□□ 0.44
C9orf3-221ENST00000489562 QSER1Q2KHR3 1735 aa17.76■□□□□ 0.43
C9orf3-221ENST00000489562 A1BGP04217 495 aa17.76■□□□□ 0.43
C9orf3-221ENST00000489562 SLC4A2P04920 1241 aa17.76■□□□□ 0.43
C9orf3-221ENST00000489562 IL6STP40189 918 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-221ENST00000489562 KCNQ4P56696 695 aa17.76■□□□□ 0.43
C9orf3-221ENST00000489562 PDIA6Q15084 440 aa17.76■□□□□ 0.43
C9orf3-221ENST00000489562 MRPL50Q8N5N7 158 aaKnown RBP17.76■□□□□ 0.43
C9orf3-221ENST00000489562 NBPF26B4DH59 902 aa17.75■□□□□ 0.43
C9orf3-221ENST00000489562 EZH2Q15910 746 aaKnown RBP17.75■□□□□ 0.43
C9orf3-221ENST00000489562 NBPF14Q5TI25 921 aa17.75■□□□□ 0.43
C9orf3-221ENST00000489562 NBPF10Q6P3W6 841 aaKnown RBP17.75■□□□□ 0.43
C9orf3-221ENST00000489562 INTS5Q6P9B9 1019 aaKnown RBP17.75■□□□□ 0.43
C9orf3-221ENST00000489562 DEFB132Q7Z7B7 95 aa17.75■□□□□ 0.43
C9orf3-221ENST00000489562 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
C9orf3-221ENST00000489562 NBPF15Q8N660 670 aa17.75■□□□□ 0.43
C9orf3-221ENST00000489562 BCL2L13Q9BXK5 485 aa17.75■□□□□ 0.43
C9orf3-221ENST00000489562 ZBTB1Q9Y2K1 713 aa17.75■□□□□ 0.43
C9orf3-221ENST00000489562 TCERG1O14776 1098 aaKnown RBP17.74■□□□□ 0.43
C9orf3-221ENST00000489562 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-221ENST00000489562 AK7Q96M32 723 aa17.74■□□□□ 0.43
C9orf3-221ENST00000489562 TUBGCP6Q96RT7 1819 aa17.74■□□□□ 0.43
C9orf3-221ENST00000489562 PTPRCP08575 1304 aa17.73■□□□□ 0.43
C9orf3-221ENST00000489562 IPO8O15397 1037 aaKnown RBP17.73■□□□□ 0.43
C9orf3-221ENST00000489562 RPS6KA4O75676 772 aa17.73■□□□□ 0.43
C9orf3-221ENST00000489562 BCAR3O75815 825 aa17.73■□□□□ 0.43
C9orf3-221ENST00000489562 MYL6BP14649 208 aa17.73■□□□□ 0.43
C9orf3-221ENST00000489562 CANXP27824 592 aaKnown RBP17.73■□□□□ 0.43
C9orf3-221ENST00000489562 PROSER3Q2NL68 480 aa17.73■□□□□ 0.43
C9orf3-221ENST00000489562 A0A087WZG4 1122 aa17.72■□□□□ 0.43
C9orf3-221ENST00000489562 GNPATO15228 680 aa17.72■□□□□ 0.43
C9orf3-221ENST00000489562 EIF5P55010 431 aaKnown RBP17.72■□□□□ 0.43
C9orf3-221ENST00000489562 FLIIQ13045 1269 aa17.72■□□□□ 0.43
C9orf3-221ENST00000489562 LRP10Q7Z4F1 713 aa17.72■□□□□ 0.43
C9orf3-221ENST00000489562 ARHGAP45Q92619 1136 aa17.72■□□□□ 0.43
C9orf3-221ENST00000489562 RTCBQ9Y3I0 505 aaKnown RBP17.72■□□□□ 0.43
C9orf3-221ENST00000489562 C4AP0C0L4 1744 aa17.72■□□□□ 0.43
C9orf3-221ENST00000489562 BCORQ6W2J9 1755 aa17.71■□□□□ 0.43
C9orf3-221ENST00000489562 N4BP2Q86UW6 1770 aaPredicted RBP17.71■□□□□ 0.43
C9orf3-221ENST00000489562 ARFGEF2Q9Y6D5 1785 aa17.71■□□□□ 0.43
C9orf3-221ENST00000489562 COL15A1P39059 1388 aa17.71■□□□□ 0.43
C9orf3-221ENST00000489562 DDX58O95786 925 aaKnown RBP17.71■□□□□ 0.43
C9orf3-221ENST00000489562 ANXA1P04083 346 aa17.71■□□□□ 0.43
C9orf3-221ENST00000489562 ADRA2BP18089 450 aa17.71■□□□□ 0.43
C9orf3-221ENST00000489562 PIP4K2AP48426 406 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-221ENST00000489562 ZKSCAN2Q63HK3 967 aa17.7■□□□□ 0.42
C9orf3-221ENST00000489562 XAGE3Q8WTP9 111 aa17.7■□□□□ 0.42
C9orf3-221ENST00000489562 API5Q9BZZ5 524 aaKnown RBP17.7■□□□□ 0.42
C9orf3-221ENST00000489562 PHAXQ9H814 394 aaKnown RBP17.7■□□□□ 0.42
C9orf3-221ENST00000489562 NUP98P52948 1817 aa17.7■□□□□ 0.42
C9orf3-221ENST00000489562 SCN7AQ01118 1682 aa17.69■□□□□ 0.42
C9orf3-221ENST00000489562 MS4A1P11836 297 aa17.69■□□□□ 0.42
C9orf3-221ENST00000489562 SSFA2P28290 1259 aa17.69■□□□□ 0.42
C9orf3-221ENST00000489562 FKBP5Q13451 457 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-221ENST00000489562 COPS6Q7L5N1 327 aa17.69■□□□□ 0.42
C9orf3-221ENST00000489562 G2E3Q7L622 706 aa17.69■□□□□ 0.42
C9orf3-221ENST00000489562 FLAD1Q8NFF5 587 aa17.69■□□□□ 0.42
C9orf3-221ENST00000489562 AKT1S1Q96B36 256 aa17.69■□□□□ 0.42
C9orf3-221ENST00000489562 NOB1Q9ULX3 412 aaKnown RBP17.69■□□□□ 0.42
C9orf3-221ENST00000489562 ZNF330Q9Y3S2 320 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-221ENST00000489562 ANKRD36CQ5JPF3 1778 aa17.68■□□□□ 0.42
C9orf3-221ENST00000489562 ATF7IPQ6VMQ6 1270 aa17.68■□□□□ 0.42
C9orf3-221ENST00000489562 KIF6Q6ZMV9 814 aa17.68■□□□□ 0.42
C9orf3-221ENST00000489562 FRAT1Q92837 279 aaPredicted RBP17.68■□□□□ 0.42
C9orf3-221ENST00000489562 STK32BQ9NY57 414 aa17.68■□□□□ 0.42
C9orf3-221ENST00000489562 RNF123Q5XPI4 1314 aa17.68■□□□□ 0.42
C9orf3-221ENST00000489562 RGL2O15211 777 aa17.67■□□□□ 0.42
C9orf3-221ENST00000489562 RRP1P56182 461 aaKnown RBP17.67■□□□□ 0.42
C9orf3-221ENST00000489562 AIMP1Q12904 312 aaKnown RBP17.67■□□□□ 0.42
C9orf3-221ENST00000489562 PLBD2Q8NHP8 589 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 354.2 ms