RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 MSH5O43196 834 aa18.79■□□□□ 0.6
HLA-F-229ENST00000489502 ZBTB7AO95365 584 aa18.79■□□□□ 0.6
HLA-F-229ENST00000489502 ZNF853P0CG23 659 aa18.79■□□□□ 0.6
HLA-F-229ENST00000489502 HMGB2P26583 209 aaKnown RBP18.79■□□□□ 0.6
HLA-F-229ENST00000489502 RC3H1Q5TC82 1133 aaKnown RBP18.79■□□□□ 0.6
HLA-F-229ENST00000489502 COL23A1Q86Y22 540 aaPredicted RBP18.79■□□□□ 0.6
HLA-F-229ENST00000489502 BABAM1Q9NWV8 329 aa18.79■□□□□ 0.6
HLA-F-229ENST00000489502 STARD3NLO95772 234 aa18.78■□□□□ 0.6
HLA-F-229ENST00000489502 SSFA2P28290 1259 aa18.78■□□□□ 0.6
HLA-F-229ENST00000489502 PIP4K2AP48426 406 aaPredicted RBP18.78■□□□□ 0.6
HLA-F-229ENST00000489502 GNAI1P63096 354 aa18.78■□□□□ 0.6
HLA-F-229ENST00000489502 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
HLA-F-229ENST00000489502 RTCBQ9Y3I0 505 aaKnown RBP18.78■□□□□ 0.6
HLA-F-229ENST00000489502 USP16Q9Y5T5 823 aa18.78■□□□□ 0.6
HLA-F-229ENST00000489502 SRCAPQ6ZRS2 3230 aa18.78■□□□□ 0.6
HLA-F-229ENST00000489502 SOS1Q07889 1333 aaPredicted RBP18.77■□□□□ 0.6
HLA-F-229ENST00000489502 GIGYF1O75420 1035 aaPredicted RBP18.77■□□□□ 0.6
HLA-F-229ENST00000489502 TSR2Q969E8 191 aaKnown RBP18.77■□□□□ 0.6
HLA-F-229ENST00000489502 LRP5O75197 1615 aa18.77■□□□□ 0.6
HLA-F-229ENST00000489502 RPS6KA4O75676 772 aa18.76■□□□□ 0.59
HLA-F-229ENST00000489502 A1BGP04217 495 aa18.76■□□□□ 0.59
HLA-F-229ENST00000489502 CANXP27824 592 aaKnown RBP18.76■□□□□ 0.59
HLA-F-229ENST00000489502 TEX13AQ9BXU3 409 aaPredicted RBP18.76■□□□□ 0.59
HLA-F-229ENST00000489502 COL15A1P39059 1388 aa18.76■□□□□ 0.59
HLA-F-229ENST00000489502 ZNF521Q96K83 1311 aa18.75■□□□□ 0.59
HLA-F-229ENST00000489502 MSL1Q68DK7 614 aa18.75■□□□□ 0.59
HLA-F-229ENST00000489502 ZNF330Q9Y3S2 320 aaPredicted RBP18.75■□□□□ 0.59
HLA-F-229ENST00000489502 IL16Q14005 1332 aa18.74■□□□□ 0.59
HLA-F-229ENST00000489502 SCN7AQ01118 1682 aa18.74■□□□□ 0.59
HLA-F-229ENST00000489502 FLAD1Q8NFF5 587 aa18.74■□□□□ 0.59
HLA-F-229ENST00000489502 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
HLA-F-229ENST00000489502 ATF5Q9Y2D1 282 aaPredicted RBP18.74■□□□□ 0.59
HLA-F-229ENST00000489502 FANCIQ9NVI1 1328 aa18.74■□□□□ 0.59
HLA-F-229ENST00000489502 WDR63Q8IWG1 891 aa18.73■□□□□ 0.59
HLA-F-229ENST00000489502 NGEFQ8N5V2 710 aa18.73■□□□□ 0.59
HLA-F-229ENST00000489502 ARHGEF1Q92888 912 aaKnown RBP18.73■□□□□ 0.59
HLA-F-229ENST00000489502 COL24A1Q17RW2 1714 aa18.73■□□□□ 0.59
HLA-F-229ENST00000489502 ADRA2BP18089 450 aa18.72■□□□□ 0.59
HLA-F-229ENST00000489502 TRAPPC3LQ5T215 181 aa18.72■□□□□ 0.59
HLA-F-229ENST00000489502 NECTIN2Q92692 538 aa18.72■□□□□ 0.59
HLA-F-229ENST00000489502 MTFR1LQ9H019 292 aa18.72■□□□□ 0.59
HLA-F-229ENST00000489502 SRP68Q9UHB9 627 aaKnown RBP18.72■□□□□ 0.59
HLA-F-229ENST00000489502 BCORQ6W2J9 1755 aa18.71■□□□□ 0.59
HLA-F-229ENST00000489502 NBPF26B4DH59 902 aa18.71■□□□□ 0.59
HLA-F-229ENST00000489502 EIF2S2P20042 333 aaKnown RBP18.71■□□□□ 0.59
HLA-F-229ENST00000489502 NBPF10Q6P3W6 841 aaKnown RBP18.71■□□□□ 0.59
HLA-F-229ENST00000489502 NBPF15Q8N660 670 aa18.71■□□□□ 0.59
HLA-F-229ENST00000489502 RFC4P35249 363 aa18.7■□□□□ 0.58
HLA-F-229ENST00000489502 EIF5P55010 431 aaKnown RBP18.7■□□□□ 0.58
HLA-F-229ENST00000489502 DUSP27Q5VZP5 1158 aa18.7■□□□□ 0.58
HLA-F-229ENST00000489502 C8orf58Q8NAV2 365 aa18.7■□□□□ 0.58
HLA-F-229ENST00000489502 USP42Q9H9J4 1324 aaKnown RBP18.7■□□□□ 0.58
HLA-F-229ENST00000489502 ELL2O00472 640 aaPredicted RBP18.69■□□□□ 0.58
HLA-F-229ENST00000489502 IL6STP40189 918 aaPredicted RBP18.69■□□□□ 0.58
HLA-F-229ENST00000489502 HNRNPUQ00839 825 aaKnown RBP eCLIP18.69■□□□□ 0.58
HLA-F-229ENST00000489502 SLC16A10Q8TF71 515 aa18.69■□□□□ 0.58
HLA-F-229ENST00000489502 SPON1Q9HCB6 807 aa18.69■□□□□ 0.58
HLA-F-229ENST00000489502 ANXA1P04083 346 aa18.68■□□□□ 0.58
HLA-F-229ENST00000489502 HDGFL1Q5TGJ6 251 aa18.68■□□□□ 0.58
HLA-F-229ENST00000489502 TSPYL6Q8N831 410 aa18.68■□□□□ 0.58
HLA-F-229ENST00000489502 HOXB7P09629 217 aa18.67■□□□□ 0.58
HLA-F-229ENST00000489502 MYL6BP14649 208 aa18.67■□□□□ 0.58
HLA-F-229ENST00000489502 PTGER2P43116 358 aa18.67■□□□□ 0.58
HLA-F-229ENST00000489502 PROSER3Q2NL68 480 aa18.67■□□□□ 0.58
HLA-F-229ENST00000489502 GYS1P13807 737 aa18.66■□□□□ 0.58
HLA-F-229ENST00000489502 USPL1Q5W0Q7 1092 aa18.66■□□□□ 0.58
HLA-F-229ENST00000489502 ARXQ96QS3 562 aa18.66■□□□□ 0.58
HLA-F-229ENST00000489502 SGIP1Q9BQI5 828 aa18.66■□□□□ 0.58
HLA-F-229ENST00000489502 MYH16Q9H6N6 1097 aa18.66■□□□□ 0.58
HLA-F-229ENST00000489502 TBC1D2BQ9UPU7 963 aa18.66■□□□□ 0.58
HLA-F-229ENST00000489502 ERBB4Q15303 1308 aa18.66■□□□□ 0.58
HLA-F-229ENST00000489502 GOLGA2Q08379 1002 aa18.65■□□□□ 0.58
HLA-F-229ENST00000489502 CDCA7LQ96GN5 454 aa18.65■□□□□ 0.58
HLA-F-229ENST00000489502 CHPF2Q9P2E5 772 aa18.65■□□□□ 0.58
HLA-F-229ENST00000489502 A0A087WZG4 1122 aa18.64■□□□□ 0.57
HLA-F-229ENST00000489502 ZPR1O75312 459 aa18.64■□□□□ 0.57
HLA-F-229ENST00000489502 EXOSC9Q06265 439 aaKnown RBP18.64■□□□□ 0.57
HLA-F-229ENST00000489502 FKBP8Q14318 412 aa18.64■□□□□ 0.57
HLA-F-229ENST00000489502 PDIA6Q15084 440 aa18.64■□□□□ 0.57
HLA-F-229ENST00000489502 NPM2Q86SE8 214 aaKnown RBP18.64■□□□□ 0.57
HLA-F-229ENST00000489502 DZIP3Q86Y13 1208 aaKnown RBP18.64■□□□□ 0.57
HLA-F-229ENST00000489502 NARFQ9UHQ1 456 aa18.64■□□□□ 0.57
HLA-F-229ENST00000489502 TWISTNBQ3B726 338 aaPredicted RBP18.63■□□□□ 0.57
HLA-F-229ENST00000489502 BCL2L12Q9HB09 334 aa18.63■□□□□ 0.57
HLA-F-229ENST00000489502 E9PSI1 815 aa18.62■□□□□ 0.57
HLA-F-229ENST00000489502 CAMTA2O94983 1202 aa18.62■□□□□ 0.57
HLA-F-229ENST00000489502 POLD1P28340 1107 aa18.62■□□□□ 0.57
HLA-F-229ENST00000489502 TTLL7Q6ZT98 887 aa18.62■□□□□ 0.57
HLA-F-229ENST00000489502 LRP10Q7Z4F1 713 aa18.62■□□□□ 0.57
HLA-F-229ENST00000489502 TCERG1O14776 1098 aaKnown RBP18.61■□□□□ 0.57
HLA-F-229ENST00000489502 MMP10P09238 476 aa18.61■□□□□ 0.57
HLA-F-229ENST00000489502 SLFN5Q08AF3 891 aa18.61■□□□□ 0.57
HLA-F-229ENST00000489502 PPP1R1BQ9UD71 204 aaPredicted RBP18.61■□□□□ 0.57
HLA-F-229ENST00000489502 DDX21Q9NR30 783 aaKnown RBP eCLIP18.6■□□□□ 0.57
HLA-F-229ENST00000489502 NUP98P52948 1817 aa18.59■□□□□ 0.57
HLA-F-229ENST00000489502 DDR1Q08345 913 aa18.59■□□□□ 0.57
HLA-F-229ENST00000489502 NLGN1Q8N2Q7 840 aa18.59■□□□□ 0.57
HLA-F-229ENST00000489502 XAGE3Q8WTP9 111 aa18.59■□□□□ 0.57
HLA-F-229ENST00000489502 DBF4Q9UBU7 674 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-229ENST00000489502 AFDNP55196 1824 aaKnown RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms