RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 CABP2Q9NPB3 220 aa25.29■■□□□ 1.64
NSMCE4A-211ENST00000489266 FHOD1Q9Y613 1164 aa25.29■■□□□ 1.64
NSMCE4A-211ENST00000489266 APBB1O00213 710 aa25.29■■□□□ 1.64
NSMCE4A-211ENST00000489266 NOP2P46087 812 aaKnown RBP25.29■■□□□ 1.64
NSMCE4A-211ENST00000489266 PDE1AP54750 535 aa25.29■■□□□ 1.64
NSMCE4A-211ENST00000489266 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.28■■□□□ 1.64
NSMCE4A-211ENST00000489266 SLU7O95391 586 aaKnown RBP25.28■■□□□ 1.64
NSMCE4A-211ENST00000489266 GTF3C6Q969F1 213 aa25.28■■□□□ 1.64
NSMCE4A-211ENST00000489266 THUMPD2Q9BTF0 503 aaKnown RBP25.28■■□□□ 1.64
NSMCE4A-211ENST00000489266 TYRO3Q06418 890 aa25.27■■□□□ 1.64
NSMCE4A-211ENST00000489266 PTPN14Q15678 1187 aa25.27■■□□□ 1.64
NSMCE4A-211ENST00000489266 TRIM5Q9C035 493 aa25.27■■□□□ 1.64
NSMCE4A-211ENST00000489266 PTPRCP08575 1304 aa25.27■■□□□ 1.64
NSMCE4A-211ENST00000489266 SYT1P21579 422 aa25.27■■□□□ 1.64
NSMCE4A-211ENST00000489266 C8orf58Q8NAV2 365 aa25.27■■□□□ 1.64
NSMCE4A-211ENST00000489266 NFATC2IPQ8NCF5 419 aa25.27■■□□□ 1.64
NSMCE4A-211ENST00000489266 SSH2Q76I76 1423 aa25.26■■□□□ 1.63
NSMCE4A-211ENST00000489266 CBX8Q9HC52 389 aa25.26■■□□□ 1.63
NSMCE4A-211ENST00000489266 TUBGCP6Q96RT7 1819 aa25.26■■□□□ 1.63
NSMCE4A-211ENST00000489266 MROH1Q8NDA8 1641 aa25.26■■□□□ 1.63
NSMCE4A-211ENST00000489266 EFCAB6Q5THR3 1501 aa25.26■■□□□ 1.63
NSMCE4A-211ENST00000489266 USP27XA6NNY8 438 aa25.25■■□□□ 1.63
NSMCE4A-211ENST00000489266 TXLNBQ8N3L3 684 aa25.25■■□□□ 1.63
NSMCE4A-211ENST00000489266 PPLO60437 1756 aa25.25■■□□□ 1.63
NSMCE4A-211ENST00000489266 MAP3K11Q16584 847 aa25.25■■□□□ 1.63
NSMCE4A-211ENST00000489266 ANO2Q9NQ90 1003 aa25.25■■□□□ 1.63
NSMCE4A-211ENST00000489266 KIDINS220Q9ULH0 1771 aa25.24■■□□□ 1.63
NSMCE4A-211ENST00000489266 HTATSF1O43719 755 aaKnown RBP25.24■■□□□ 1.63
NSMCE4A-211ENST00000489266 PLA2G4AP47712 749 aa25.24■■□□□ 1.63
NSMCE4A-211ENST00000489266 CCDC144BQ3MJ40 725 aa25.24■■□□□ 1.63
NSMCE4A-211ENST00000489266 CCDC144CPQ8IYA2 1237 aa25.24■■□□□ 1.63
NSMCE4A-211ENST00000489266 PHACTR3Q96KR7 559 aa25.24■■□□□ 1.63
NSMCE4A-211ENST00000489266 RAD50Q92878 1312 aa25.24■■□□□ 1.63
NSMCE4A-211ENST00000489266 CLIP2Q9UDT6 1046 aa25.24■■□□□ 1.63
NSMCE4A-211ENST00000489266 ZFYVE9O95405 1425 aa25.24■■□□□ 1.63
NSMCE4A-211ENST00000489266 TEX35Q5T0J7 233 aa25.23■■□□□ 1.63
NSMCE4A-211ENST00000489266 NEK11Q8NG66 645 aa25.23■■□□□ 1.63
NSMCE4A-211ENST00000489266 PNMA6AP0CW24 399 aaPredicted RBP25.23■■□□□ 1.63
NSMCE4A-211ENST00000489266 MMP14P50281 582 aa25.23■■□□□ 1.63
NSMCE4A-211ENST00000489266 SYT10Q6XYQ8 523 aa25.23■■□□□ 1.63
NSMCE4A-211ENST00000489266 TDRD7Q8NHU6 1098 aaKnown RBP25.23■■□□□ 1.63
NSMCE4A-211ENST00000489266 DHX16O60231 1041 aaKnown RBP25.22■■□□□ 1.63
NSMCE4A-211ENST00000489266 DNM1Q05193 864 aaKnown RBP25.22■■□□□ 1.63
NSMCE4A-211ENST00000489266 EPB41L2O43491 1005 aaKnown RBP25.22■■□□□ 1.63
NSMCE4A-211ENST00000489266 LRRC8AQ8IWT6 810 aa25.22■■□□□ 1.63
NSMCE4A-211ENST00000489266 NUP62CLQ9H1M0 184 aa25.22■■□□□ 1.63
NSMCE4A-211ENST00000489266 ARHGEF28Q8N1W1 1705 aaKnown RBP25.21■■□□□ 1.63
NSMCE4A-211ENST00000489266 GLI2P10070 1586 aa25.21■■□□□ 1.63
NSMCE4A-211ENST00000489266 CDC25BP30305 580 aa25.21■■□□□ 1.63
NSMCE4A-211ENST00000489266 ANO6Q4KMQ2 910 aa25.21■■□□□ 1.63
NSMCE4A-211ENST00000489266 CLCN6P51797 869 aa25.2■■□□□ 1.63
NSMCE4A-211ENST00000489266 CTR9Q6PD62 1173 aa25.2■■□□□ 1.63
NSMCE4A-211ENST00000489266 POLKQ9UBT6 870 aa25.2■■□□□ 1.63
NSMCE4A-211ENST00000489266 HMMRO75330 724 aa25.2■■□□□ 1.62
NSMCE4A-211ENST00000489266 CHMLP26374 656 aa25.2■■□□□ 1.62
NSMCE4A-211ENST00000489266 SOX12O15370 315 aa25.19■■□□□ 1.62
NSMCE4A-211ENST00000489266 NEMFO60524 1076 aa25.19■■□□□ 1.62
NSMCE4A-211ENST00000489266 KRBA2Q6ZNG9 492 aa25.19■■□□□ 1.62
NSMCE4A-211ENST00000489266 TERF2IPQ9NYB0 399 aa25.19■■□□□ 1.62
NSMCE4A-211ENST00000489266 RPGRIP1LQ68CZ1 1315 aa25.19■■□□□ 1.62
NSMCE4A-211ENST00000489266 CHGAP10645 457 aaKnown RBP25.19■■□□□ 1.62
NSMCE4A-211ENST00000489266 MYO1CO00159 1063 aa25.18■■□□□ 1.62
NSMCE4A-211ENST00000489266 TPM4P67936 248 aa25.18■■□□□ 1.62
NSMCE4A-211ENST00000489266 SALL3Q9BXA9 1300 aa25.18■■□□□ 1.62
NSMCE4A-211ENST00000489266 NPHP1O15259 732 aa25.18■■□□□ 1.62
NSMCE4A-211ENST00000489266 CASQ1P31415 396 aa25.17■■□□□ 1.62
NSMCE4A-211ENST00000489266 ERCC6LQ2NKX8 1250 aa25.17■■□□□ 1.62
NSMCE4A-211ENST00000489266 AATKQ6ZMQ8 1374 aa25.17■■□□□ 1.62
NSMCE4A-211ENST00000489266 SMC3Q9UQE7 1217 aa25.17■■□□□ 1.62
NSMCE4A-211ENST00000489266 GTF2A1P52655 376 aaPredicted RBP25.16■■□□□ 1.62
NSMCE4A-211ENST00000489266 CAMK4Q16566 473 aa25.16■■□□□ 1.62
NSMCE4A-211ENST00000489266 CHMP4CQ96CF2 233 aa25.16■■□□□ 1.62
NSMCE4A-211ENST00000489266 L2HGDHQ9H9P8 463 aa25.16■■□□□ 1.62
NSMCE4A-211ENST00000489266 KIAA0232Q92628 1395 aa25.16■■□□□ 1.62
NSMCE4A-211ENST00000489266 ZRANB2O95218 330 aaKnown RBP eCLIP25.16■■□□□ 1.62
NSMCE4A-211ENST00000489266 LMOD3Q0VAK6 560 aa25.16■■□□□ 1.62
NSMCE4A-211ENST00000489266 C10orf67Q8IYJ2 551 aa25.16■■□□□ 1.62
NSMCE4A-211ENST00000489266 MEIS3Q99687 375 aa25.16■■□□□ 1.62
NSMCE4A-211ENST00000489266 MSH6P52701 1360 aa25.15■■□□□ 1.62
NSMCE4A-211ENST00000489266 LMTK2Q8IWU2 1503 aa25.15■■□□□ 1.62
NSMCE4A-211ENST00000489266 KIF2AO00139 706 aaPredicted RBP25.15■■□□□ 1.62
NSMCE4A-211ENST00000489266 TRIM66O15016 1216 aa25.15■■□□□ 1.62
NSMCE4A-211ENST00000489266 KCND1Q9NSA2 647 aa25.15■■□□□ 1.62
NSMCE4A-211ENST00000489266 MTMR6Q9Y217 621 aa25.15■■□□□ 1.62
NSMCE4A-211ENST00000489266 SKILP12757 684 aa25.15■■□□□ 1.62
NSMCE4A-211ENST00000489266 HSPA4P34932 840 aa25.15■■□□□ 1.62
NSMCE4A-211ENST00000489266 ICE2Q659A1 982 aa25.15■■□□□ 1.62
NSMCE4A-211ENST00000489266 LRRFIP2Q9Y608 721 aaKnown RBP25.15■■□□□ 1.62
NSMCE4A-211ENST00000489266 CPSF1Q10570 1443 aaKnown RBP25.15■■□□□ 1.62
NSMCE4A-211ENST00000489266 LIG1P18858 919 aa25.14■■□□□ 1.62
NSMCE4A-211ENST00000489266 CCAR2Q8N163 923 aaKnown RBP25.14■■□□□ 1.62
NSMCE4A-211ENST00000489266 ATG3Q9NT62 314 aa25.14■■□□□ 1.62
NSMCE4A-211ENST00000489266 POGZQ7Z3K3 1410 aa25.14■■□□□ 1.61
NSMCE4A-211ENST00000489266 ARID5BQ14865 1188 aa25.13■■□□□ 1.61
NSMCE4A-211ENST00000489266 CKAP2LQ8IYA6 745 aa25.13■■□□□ 1.61
NSMCE4A-211ENST00000489266 TTC14Q96N46 770 aa25.13■■□□□ 1.61
NSMCE4A-211ENST00000489266 TNMDQ9H2S6 317 aa25.13■■□□□ 1.61
NSMCE4A-211ENST00000489266 LCMT1Q9UIC8 334 aa25.13■■□□□ 1.61
NSMCE4A-211ENST00000489266 CD163L1Q9NR16 1453 aa25.13■■□□□ 1.61
NSMCE4A-211ENST00000489266 MLH3Q9UHC1 1453 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms