RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 SRP68Q9UHB9 627 aaKnown RBP23.14■■□□□ 1.29
ATG3-205ENST00000488910 ZBTB1Q9Y2K1 713 aa23.14■■□□□ 1.29
ATG3-205ENST00000488910 KCNQ3O43525 872 aa23.13■■□□□ 1.29
ATG3-205ENST00000488910 PELP1Q8IZL8 1130 aaKnown RBP23.13■■□□□ 1.29
ATG3-205ENST00000488910 PARP3Q9Y6F1 533 aa23.13■■□□□ 1.29
ATG3-205ENST00000488910 GRIN3BO60391 1043 aa23.12■■□□□ 1.29
ATG3-205ENST00000488910 NARFQ9UHQ1 456 aa23.12■■□□□ 1.29
ATG3-205ENST00000488910 GOLGB1Q14789 3259 aaKnown RBP23.11■■□□□ 1.29
ATG3-205ENST00000488910 CANXP27824 592 aaKnown RBP23.11■■□□□ 1.29
ATG3-205ENST00000488910 FKBP8Q14318 412 aa23.11■■□□□ 1.29
ATG3-205ENST00000488910 PRKRIP1Q9H875 184 aaPredicted RBP23.11■■□□□ 1.29
ATG3-205ENST00000488910 COL15A1P39059 1388 aa23.11■■□□□ 1.29
ATG3-205ENST00000488910 A0A087WZG4 1122 aa23.1■■□□□ 1.29
ATG3-205ENST00000488910 EIF5P55010 431 aaKnown RBP23.1■■□□□ 1.29
ATG3-205ENST00000488910 USPL1Q5W0Q7 1092 aa23.1■■□□□ 1.29
ATG3-205ENST00000488910 PNISRQ8TF01 805 aaKnown RBP23.1■■□□□ 1.29
ATG3-205ENST00000488910 CHD4Q14839 1912 aa23.1■■□□□ 1.29
ATG3-205ENST00000488910 DLG5Q8TDM6 1919 aa23.1■■□□□ 1.29
ATG3-205ENST00000488910 TM4SF1P30408 202 aa23.09■■□□□ 1.29
ATG3-205ENST00000488910 TGFB2P61812 414 aa23.09■■□□□ 1.29
ATG3-205ENST00000488910 SNRPA1P09661 255 aaKnown RBP23.08■■□□□ 1.29
ATG3-205ENST00000488910 YBX3P16989 372 aaKnown RBP eCLIP23.08■■□□□ 1.29
ATG3-205ENST00000488910 IL6STP40189 918 aaPredicted RBP23.07■■□□□ 1.28
ATG3-205ENST00000488910 KIF13BQ9NQT8 1826 aa23.06■■□□□ 1.28
ATG3-205ENST00000488910 WDR43Q15061 677 aaKnown RBP eCLIP23.06■■□□□ 1.28
ATG3-205ENST00000488910 USP16Q9Y5T5 823 aa23.06■■□□□ 1.28
ATG3-205ENST00000488910 A1BGP04217 495 aa23.05■■□□□ 1.28
ATG3-205ENST00000488910 NPM2Q86SE8 214 aaKnown RBP23.05■■□□□ 1.28
ATG3-205ENST00000488910 C10orf71Q711Q0 1435 aa23.05■■□□□ 1.28
ATG3-205ENST00000488910 RIPK4P57078 832 aa23.04■■□□□ 1.28
ATG3-205ENST00000488910 DDR1Q08345 913 aa23.04■■□□□ 1.28
ATG3-205ENST00000488910 MIS18AQ9NYP9 233 aa23.04■■□□□ 1.28
ATG3-205ENST00000488910 POLRMTO00411 1230 aaKnown RBP23.03■■□□□ 1.28
ATG3-205ENST00000488910 TMPOP42166 694 aaKnown RBP23.03■■□□□ 1.28
ATG3-205ENST00000488910 LMOD3Q0VAK6 560 aa23.03■■□□□ 1.28
ATG3-205ENST00000488910 BCL2L12Q9HB09 334 aa23.03■■□□□ 1.28
ATG3-205ENST00000488910 NFIXQ14938 502 aa23.02■■□□□ 1.28
ATG3-205ENST00000488910 RUNDC1Q96C34 613 aa23.02■■□□□ 1.28
ATG3-205ENST00000488910 ZNF316A6NFI3 1004 aaPredicted RBP23.01■■□□□ 1.27
ATG3-205ENST00000488910 THUMPD2Q9BTF0 503 aaKnown RBP23.01■■□□□ 1.27
ATG3-205ENST00000488910 ZNF330Q9Y3S2 320 aaPredicted RBP23.01■■□□□ 1.27
ATG3-205ENST00000488910 PXDNLA1KZ92 1463 aa23■■□□□ 1.27
ATG3-205ENST00000488910 A0A0G2JLW4 131 aa23■■□□□ 1.27
ATG3-205ENST00000488910 PRAMEF22A3QJZ6 481 aa23■■□□□ 1.27
ATG3-205ENST00000488910 ADAMTS8Q9UP79 889 aa23■■□□□ 1.27
ATG3-205ENST00000488910 TBC1D2BQ9UPU7 963 aa23■■□□□ 1.27
ATG3-205ENST00000488910 BABAM1Q9NWV8 329 aa22.99■■□□□ 1.27
ATG3-205ENST00000488910 DPEP1P16444 411 aa22.98■■□□□ 1.27
ATG3-205ENST00000488910 EIF4A1P60842 406 aaKnown RBP22.98■■□□□ 1.27
ATG3-205ENST00000488910 CCDC146Q8IYE0 955 aa22.98■■□□□ 1.27
ATG3-205ENST00000488910 GIGYF1O75420 1035 aaPredicted RBP22.97■■□□□ 1.27
ATG3-205ENST00000488910 SERPINB2P05120 415 aa22.97■■□□□ 1.27
ATG3-205ENST00000488910 DZIP3Q86Y13 1208 aaKnown RBP22.96■■□□□ 1.27
ATG3-205ENST00000488910 ZNF784Q8NCA9 323 aaPredicted RBP22.96■■□□□ 1.27
ATG3-205ENST00000488910 KIAA1551Q9HCM1 1747 aa22.96■■□□□ 1.27
ATG3-205ENST00000488910 KDM3BQ7LBC6 1761 aa22.96■■□□□ 1.27
ATG3-205ENST00000488910 N4BP2Q86UW6 1770 aaPredicted RBP22.96■■□□□ 1.27
ATG3-205ENST00000488910 CAMTA2O94983 1202 aa22.95■■□□□ 1.26
ATG3-205ENST00000488910 KCNA3P22001 575 aa22.95■■□□□ 1.26
ATG3-205ENST00000488910 TSPYL4Q9UJ04 414 aa22.95■■□□□ 1.26
ATG3-205ENST00000488910 WWC3Q9ULE0 1092 aa22.95■■□□□ 1.26
ATG3-205ENST00000488910 NBPF26B4DH59 902 aa22.94■■□□□ 1.26
ATG3-205ENST00000488910 NEUROD2Q15784 382 aa22.94■■□□□ 1.26
ATG3-205ENST00000488910 TBC1D9BQ66K14 1250 aa22.94■■□□□ 1.26
ATG3-205ENST00000488910 NBPF10Q6P3W6 841 aaKnown RBP22.94■■□□□ 1.26
ATG3-205ENST00000488910 CLEC4GQ6UXB4 293 aa22.94■■□□□ 1.26
ATG3-205ENST00000488910 NBPF15Q8N660 670 aa22.94■■□□□ 1.26
ATG3-205ENST00000488910 PIM2Q9P1W9 311 aa22.94■■□□□ 1.26
ATG3-205ENST00000488910 RRP7AQ9Y3A4 280 aaKnown RBP22.94■■□□□ 1.26
ATG3-205ENST00000488910 RGL2O15211 777 aa22.93■■□□□ 1.26
ATG3-205ENST00000488910 PIP4K2AP48426 406 aaPredicted RBP22.93■■□□□ 1.26
ATG3-205ENST00000488910 BICDL1Q6ZP65 573 aa22.93■■□□□ 1.26
ATG3-205ENST00000488910 BCS1LQ9Y276 419 aa22.93■■□□□ 1.26
ATG3-205ENST00000488910 AFDNP55196 1824 aaKnown RBP22.92■■□□□ 1.26
ATG3-205ENST00000488910 NRXN2Q9P2S2 1712 aa22.92■■□□□ 1.26
ATG3-205ENST00000488910 SETDB2Q96T68 719 aa22.92■■□□□ 1.26
ATG3-205ENST00000488910 SCN7AQ01118 1682 aa22.91■■□□□ 1.26
ATG3-205ENST00000488910 TRIM35Q9UPQ4 493 aa22.91■■□□□ 1.26
ATG3-205ENST00000488910 ZNF652Q9Y2D9 606 aa22.91■■□□□ 1.26
ATG3-205ENST00000488910 CARMIL3Q8ND23 1372 aa22.89■■□□□ 1.26
ATG3-205ENST00000488910 LAMB4A4D0S4 1761 aa22.89■■□□□ 1.26
ATG3-205ENST00000488910 DALRD3Q5D0E6 543 aaKnown RBP22.89■■□□□ 1.25
ATG3-205ENST00000488910 BRCA1P38398 1863 aaKnown RBP22.89■■□□□ 1.25
ATG3-205ENST00000488910 CHRNA5P30532 468 aa22.88■■□□□ 1.25
ATG3-205ENST00000488910 PDZRN3Q9UPQ7 1066 aa22.88■■□□□ 1.25
ATG3-205ENST00000488910 ERBB4Q15303 1308 aa22.87■■□□□ 1.25
ATG3-205ENST00000488910 CHL1O00533 1208 aa22.87■■□□□ 1.25
ATG3-205ENST00000488910 BCORQ6W2J9 1755 aa22.86■■□□□ 1.25
ATG3-205ENST00000488910 BRIP1Q9BX63 1249 aa22.86■■□□□ 1.25
ATG3-205ENST00000488910 H0YIN7 160 aa22.85■■□□□ 1.25
ATG3-205ENST00000488910 ANP32CO43423 234 aa22.85■■□□□ 1.25
ATG3-205ENST00000488910 PRR5LQ6MZQ0 368 aa22.85■■□□□ 1.25
ATG3-205ENST00000488910 ARHGAP27Q6ZUM4 889 aa22.85■■□□□ 1.25
ATG3-205ENST00000488910 ERVV-1B6SEH8 477 aa22.84■■□□□ 1.25
ATG3-205ENST00000488910 PDE6BP35913 854 aa22.84■■□□□ 1.25
ATG3-205ENST00000488910 C2CD5Q86YS7 1000 aa22.84■■□□□ 1.25
ATG3-205ENST00000488910 ARFGEF1Q9Y6D6 1849 aa22.83■■□□□ 1.25
ATG3-205ENST00000488910 APAF1O14727 1248 aa22.83■■□□□ 1.25
ATG3-205ENST00000488910 NPHP1O15259 732 aa22.83■■□□□ 1.25
ATG3-205ENST00000488910 NGEFQ8N5V2 710 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms