RNA–Protein interactions for RNA: ENST00000488144.5

LCLAT1-210, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-210ENST00000488144 HACL1Q9UJ83 578 aa9.72□□□□□ -0.85
LCLAT1-210ENST00000488144 SMG6Q86US8 1419 aaKnown RBP9.72□□□□□ -0.85
LCLAT1-210ENST00000488144 AFDNP55196 1824 aaKnown RBP9.71□□□□□ -0.85
LCLAT1-210ENST00000488144 CST9Q5W186 159 aa9.71□□□□□ -0.86
LCLAT1-210ENST00000488144 CTU1Q7Z7A3 348 aaKnown RBP9.71□□□□□ -0.86
LCLAT1-210ENST00000488144 PNMA8AQ86V59 439 aaPredicted RBP9.71□□□□□ -0.86
LCLAT1-210ENST00000488144 PIGBQ92521 554 aa9.71□□□□□ -0.86
LCLAT1-210ENST00000488144 PCDH11XQ9BZA7 1347 aa9.71□□□□□ -0.86
LCLAT1-210ENST00000488144 PCDH11YQ9BZA8 1340 aa9.71□□□□□ -0.86
LCLAT1-210ENST00000488144 USP31Q70CQ4 1352 aa9.71□□□□□ -0.86
LCLAT1-210ENST00000488144 MON2Q7Z3U7 1717 aa9.7□□□□□ -0.86
LCLAT1-210ENST00000488144 POLRMTO00411 1230 aaKnown RBP9.7□□□□□ -0.86
LCLAT1-210ENST00000488144 FKBP8Q14318 412 aa9.7□□□□□ -0.86
LCLAT1-210ENST00000488144 ZNF692Q9BU19 519 aaPredicted RBP9.7□□□□□ -0.86
LCLAT1-210ENST00000488144 CGNL1Q0VF96 1302 aa9.7□□□□□ -0.86
LCLAT1-210ENST00000488144 LTBP3Q9NS15 1303 aa9.7□□□□□ -0.86
LCLAT1-210ENST00000488144 CD163L1Q9NR16 1453 aa9.7□□□□□ -0.86
LCLAT1-210ENST00000488144 SCN11AQ9UI33 1791 aa9.7□□□□□ -0.86
LCLAT1-210ENST00000488144 RANBP2P49792 3224 aaKnown RBP9.69□□□□□ -0.86
LCLAT1-210ENST00000488144 ZNF831Q5JPB2 1677 aa9.69□□□□□ -0.86
LCLAT1-210ENST00000488144 TAOK3Q9H2K8 898 aa9.69□□□□□ -0.86
LCLAT1-210ENST00000488144 NRXN2Q9P2S2 1712 aa9.69□□□□□ -0.86
LCLAT1-210ENST00000488144 INSRP06213 1382 aa9.68□□□□□ -0.86
LCLAT1-210ENST00000488144 KDRP35968 1356 aa9.68□□□□□ -0.86
LCLAT1-210ENST00000488144 SAPCD2Q86UD0 394 aa9.68□□□□□ -0.86
LCLAT1-210ENST00000488144 IP6K1Q92551 441 aa9.68□□□□□ -0.86
LCLAT1-210ENST00000488144 SAGE1Q9NXZ1 904 aa9.68□□□□□ -0.86
LCLAT1-210ENST00000488144 KDM2AQ9Y2K7 1162 aa9.68□□□□□ -0.86
LCLAT1-210ENST00000488144 MYH14Q7Z406 1995 aaKnown RBP9.68□□□□□ -0.86
LCLAT1-210ENST00000488144 KTN1Q86UP2 1357 aaKnown RBP9.67□□□□□ -0.86
LCLAT1-210ENST00000488144 RNF123Q5XPI4 1314 aa9.67□□□□□ -0.86
LCLAT1-210ENST00000488144 ZNF541Q9H0D2 1346 aa9.67□□□□□ -0.86
LCLAT1-210ENST00000488144 USP42Q9H9J4 1324 aaKnown RBP9.67□□□□□ -0.86
LCLAT1-210ENST00000488144 TRAF5O00463 557 aa9.67□□□□□ -0.86
LCLAT1-210ENST00000488144 C21orf2O43822 256 aa9.67□□□□□ -0.86
LCLAT1-210ENST00000488144 RPS6KA4O75676 772 aa9.67□□□□□ -0.86
LCLAT1-210ENST00000488144 C1QBPQ07021 282 aaKnown RBP9.67□□□□□ -0.86
LCLAT1-210ENST00000488144 C2CD5Q86YS7 1000 aa9.67□□□□□ -0.86
LCLAT1-210ENST00000488144 HHIPL1Q96JK4 782 aa9.67□□□□□ -0.86
LCLAT1-210ENST00000488144 MPHOSPH9Q99550 1183 aa9.67□□□□□ -0.86
LCLAT1-210ENST00000488144 SRP68Q9UHB9 627 aaKnown RBP9.67□□□□□ -0.86
LCLAT1-210ENST00000488144 ASAP1Q9ULH1 1129 aa9.67□□□□□ -0.86
LCLAT1-210ENST00000488144 BRCA2P51587 3418 aa9.66□□□□□ -0.86
LCLAT1-210ENST00000488144 CNTNAP4Q9C0A0 1308 aa9.66□□□□□ -0.86
LCLAT1-210ENST00000488144 NOGQ13253 232 aa9.66□□□□□ -0.86
LCLAT1-210ENST00000488144 RC3H1Q5TC82 1133 aaKnown RBP9.66□□□□□ -0.86
LCLAT1-210ENST00000488144 RAPGEF4Q8WZA2 1011 aa9.66□□□□□ -0.86
LCLAT1-210ENST00000488144 ZIC5Q96T25 663 aa9.66□□□□□ -0.86
LCLAT1-210ENST00000488144 COL25A1Q9BXS0 654 aaPredicted RBP9.66□□□□□ -0.86
LCLAT1-210ENST00000488144 COL11A2P13942 1736 aaPredicted RBP9.65□□□□□ -0.86
LCLAT1-210ENST00000488144 AKAP11Q9UKA4 1901 aa9.65□□□□□ -0.86
LCLAT1-210ENST00000488144 CYP27B1O15528 508 aa9.65□□□□□ -0.86
LCLAT1-210ENST00000488144 TM4SF1P30408 202 aa9.65□□□□□ -0.86
LCLAT1-210ENST00000488144 PKN2Q16513 984 aaKnown RBP9.65□□□□□ -0.86
LCLAT1-210ENST00000488144 AKAP4Q5JQC9 854 aa9.65□□□□□ -0.86
LCLAT1-210ENST00000488144 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.65□□□□□ -0.86
LCLAT1-210ENST00000488144 DCAF11Q8TEB1 546 aa9.65□□□□□ -0.86
LCLAT1-210ENST00000488144 CACNA1SQ13698 1873 aa9.65□□□□□ -0.86
LCLAT1-210ENST00000488144 CEP290O15078 2479 aa9.65□□□□□ -0.86
LCLAT1-210ENST00000488144 MAP3K19Q56UN5 1328 aa9.64□□□□□ -0.87
LCLAT1-210ENST00000488144 CENPJQ9HC77 1338 aaPredicted RBP9.64□□□□□ -0.87
LCLAT1-210ENST00000488144 HTTP42858 3142 aa9.64□□□□□ -0.87
LCLAT1-210ENST00000488144 H0YIN7 160 aa9.64□□□□□ -0.87
LCLAT1-210ENST00000488144 TATP17735 454 aaPredicted RBP9.64□□□□□ -0.87
LCLAT1-210ENST00000488144 NME9Q86XW9 330 aa9.64□□□□□ -0.87
LCLAT1-210ENST00000488144 TMOD3Q9NYL9 352 aa9.64□□□□□ -0.87
LCLAT1-210ENST00000488144 VCANP13611 3396 aa9.64□□□□□ -0.87
LCLAT1-210ENST00000488144 CENPFP49454 3210 aa9.63□□□□□ -0.87
LCLAT1-210ENST00000488144 RBBP6Q7Z6E9 1792 aaKnown RBP9.63□□□□□ -0.87
LCLAT1-210ENST00000488144 USHBP1Q8N6Y0 703 aa9.63□□□□□ -0.87
LCLAT1-210ENST00000488144 SLC4A9Q96Q91 983 aa9.63□□□□□ -0.87
LCLAT1-210ENST00000488144 ANKRD31Q8N7Z5 1873 aa9.63□□□□□ -0.87
LCLAT1-210ENST00000488144 CARMIL3Q8ND23 1372 aa9.63□□□□□ -0.87
LCLAT1-210ENST00000488144 TRPA1O75762 1119 aa9.62□□□□□ -0.87
LCLAT1-210ENST00000488144 CELF2O95319 508 aaKnown RBP9.62□□□□□ -0.87
LCLAT1-210ENST00000488144 NBPF6Q5VWK0 638 aa9.62□□□□□ -0.87
LCLAT1-210ENST00000488144 OTUD5Q96G74 571 aa9.62□□□□□ -0.87
LCLAT1-210ENST00000488144 NBPF4Q96M43 638 aa9.62□□□□□ -0.87
LCLAT1-210ENST00000488144 ATG3Q9NT62 314 aa9.62□□□□□ -0.87
LCLAT1-210ENST00000488144 RNF186Q9NXI6 227 aa9.62□□□□□ -0.87
LCLAT1-210ENST00000488144 PAPPA2Q9BXP8 1791 aa9.62□□□□□ -0.87
LCLAT1-210ENST00000488144 ARFGEF2Q9Y6D5 1785 aa9.62□□□□□ -0.87
LCLAT1-210ENST00000488144 SPTBN5Q9NRC6 3674 aaKnown RBP9.61□□□□□ -0.87
LCLAT1-210ENST00000488144 BCORQ6W2J9 1755 aa9.61□□□□□ -0.87
LCLAT1-210ENST00000488144 HOXC9P31274 260 aa9.61□□□□□ -0.87
LCLAT1-210ENST00000488144 BICDL1Q6ZP65 573 aa9.61□□□□□ -0.87
LCLAT1-210ENST00000488144 ZNF622Q969S3 477 aaKnown RBP eCLIP9.61□□□□□ -0.87
LCLAT1-210ENST00000488144 PRDM6Q9NQX0 595 aa9.61□□□□□ -0.87
LCLAT1-210ENST00000488144 SLX4Q8IY92 1834 aa9.61□□□□□ -0.87
LCLAT1-210ENST00000488144 SBNO2Q9Y2G9 1366 aa9.6□□□□□ -0.87
LCLAT1-210ENST00000488144 POTEFA5A3E0 1075 aa9.59□□□□□ -0.87
LCLAT1-210ENST00000488144 NKX1-1Q15270 411 aaPredicted RBP9.59□□□□□ -0.87
LCLAT1-210ENST00000488144 GPC2Q8N158 579 aa9.59□□□□□ -0.87
LCLAT1-210ENST00000488144 STAC3Q96MF2 364 aa9.59□□□□□ -0.87
LCLAT1-210ENST00000488144 EVC2Q86UK5 1308 aa9.58□□□□□ -0.88
LCLAT1-210ENST00000488144 LAMA3Q16787 3333 aa9.58□□□□□ -0.88
LCLAT1-210ENST00000488144 SERPINB2P05120 415 aa9.58□□□□□ -0.88
LCLAT1-210ENST00000488144 NFIXQ14938 502 aa9.58□□□□□ -0.88
LCLAT1-210ENST00000488144 SOGA3Q5TF21 947 aa9.58□□□□□ -0.88
LCLAT1-210ENST00000488144 FBXO46Q6PJ61 603 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms