RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 CHL1O00533 1208 aa8.94□□□□□ -0.98
UBR4-214ENST00000486515 CT47B1P0C2W7 299 aaPredicted RBP8.94□□□□□ -0.98
UBR4-214ENST00000486515 PRIM1P49642 420 aaKnown RBP8.94□□□□□ -0.98
UBR4-214ENST00000486515 TSR2Q969E8 191 aaKnown RBP8.94□□□□□ -0.98
UBR4-214ENST00000486515 CDCA7LQ96GN5 454 aa8.94□□□□□ -0.98
UBR4-214ENST00000486515 FMNL2Q96PY5 1086 aa8.94□□□□□ -0.98
UBR4-214ENST00000486515 MBIPQ9NS73 344 aa8.94□□□□□ -0.98
UBR4-214ENST00000486515 ZNF521Q96K83 1311 aa8.94□□□□□ -0.98
UBR4-214ENST00000486515 CEMIPQ8WUJ3 1361 aa8.94□□□□□ -0.98
UBR4-214ENST00000486515 CANXP27824 592 aaKnown RBP8.93□□□□□ -0.98
UBR4-214ENST00000486515 ZNF790Q6PG37 636 aa8.93□□□□□ -0.98
UBR4-214ENST00000486515 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.93□□□□□ -0.98
UBR4-214ENST00000486515 ZNF428Q96B54 188 aa8.93□□□□□ -0.98
UBR4-214ENST00000486515 RBM42Q9BTD8 480 aaKnown RBP8.93□□□□□ -0.98
UBR4-214ENST00000486515 STK31Q9BXU1 1019 aa8.93□□□□□ -0.98
UBR4-214ENST00000486515 MIS18AQ9NYP9 233 aa8.93□□□□□ -0.98
UBR4-214ENST00000486515 FANCIQ9NVI1 1328 aa8.93□□□□□ -0.98
UBR4-214ENST00000486515 PKD1L3Q7Z443 1732 aa8.92□□□□□ -0.98
UBR4-214ENST00000486515 LRRC37A3O60309 1634 aa8.92□□□□□ -0.98
UBR4-214ENST00000486515 SOS1Q07889 1333 aaPredicted RBP8.92□□□□□ -0.98
UBR4-214ENST00000486515 CTCFP49711 727 aaPredicted RBP8.92□□□□□ -0.98
UBR4-214ENST00000486515 EXOSC9Q06265 439 aaKnown RBP8.92□□□□□ -0.98
UBR4-214ENST00000486515 TWISTNBQ3B726 338 aaPredicted RBP8.92□□□□□ -0.98
UBR4-214ENST00000486515 SLC16A10Q8TF71 515 aa8.92□□□□□ -0.98
UBR4-214ENST00000486515 TEX13AQ9BXU3 409 aaPredicted RBP8.92□□□□□ -0.98
UBR4-214ENST00000486515 ELL2O00472 640 aaPredicted RBP8.91□□□□□ -0.98
UBR4-214ENST00000486515 PTCD1O75127 700 aaKnown RBP8.91□□□□□ -0.98
UBR4-214ENST00000486515 STARD3NLO95772 234 aa8.91□□□□□ -0.98
UBR4-214ENST00000486515 SNRPA1P09661 255 aaKnown RBP8.91□□□□□ -0.98
UBR4-214ENST00000486515 ZNF853P0CG23 659 aa8.91□□□□□ -0.98
UBR4-214ENST00000486515 SLC39A6Q13433 755 aa8.91□□□□□ -0.98
UBR4-214ENST00000486515 CCDC30Q5VVM6 783 aa8.91□□□□□ -0.98
UBR4-214ENST00000486515 DUSP27Q5VZP5 1158 aa8.91□□□□□ -0.98
UBR4-214ENST00000486515 PIGBQ92521 554 aa8.91□□□□□ -0.98
UBR4-214ENST00000486515 PDE4DIPQ5VU43 2346 aa8.91□□□□□ -0.98
UBR4-214ENST00000486515 KDM6AO15550 1401 aaPredicted RBP8.9□□□□□ -0.98
UBR4-214ENST00000486515 DLL1O00548 723 aa8.9□□□□□ -0.98
UBR4-214ENST00000486515 MSH5O43196 834 aa8.9□□□□□ -0.98
UBR4-214ENST00000486515 NEFLP07196 543 aa8.9□□□□□ -0.98
UBR4-214ENST00000486515 HOXB7P09629 217 aa8.9□□□□□ -0.98
UBR4-214ENST00000486515 EIF2S2P20042 333 aaKnown RBP8.9□□□□□ -0.98
UBR4-214ENST00000486515 KCNA4P22459 653 aa8.9□□□□□ -0.98
UBR4-214ENST00000486515 EIF4A1P60842 406 aaKnown RBP8.9□□□□□ -0.98
UBR4-214ENST00000486515 HDGFL1Q5TGJ6 251 aa8.9□□□□□ -0.98
UBR4-214ENST00000486515 PPP4R3CPQ6ZMV5 832 aa8.9□□□□□ -0.98
UBR4-214ENST00000486515 RCAN3Q9UKA8 241 aa8.9□□□□□ -0.98
UBR4-214ENST00000486515 TNRC18O15417 2968 aaPredicted RBP8.9□□□□□ -0.99
UBR4-214ENST00000486515 IPO8O15397 1037 aaKnown RBP8.89□□□□□ -0.99
UBR4-214ENST00000486515 PRPF38BQ5VTL8 546 aaKnown RBP8.89□□□□□ -0.99
UBR4-214ENST00000486515 VSIG10Q8N0Z9 540 aa8.89□□□□□ -0.99
UBR4-214ENST00000486515 AIDAQ96BJ3 306 aa8.89□□□□□ -0.99
UBR4-214ENST00000486515 SPINK5Q9NQ38 1064 aaPredicted RBP8.89□□□□□ -0.99
UBR4-214ENST00000486515 SMC4Q9NTJ3 1288 aa8.89□□□□□ -0.99
UBR4-214ENST00000486515 BCL9O00512 1426 aa8.88□□□□□ -0.99
UBR4-214ENST00000486515 TOGARAM1Q9Y4F4 1720 aa8.88□□□□□ -0.99
UBR4-214ENST00000486515 MS4A1P11836 297 aa8.88□□□□□ -0.99
UBR4-214ENST00000486515 ATP6V1AP38606 617 aa8.88□□□□□ -0.99
UBR4-214ENST00000486515 LBX1P52954 281 aa8.88□□□□□ -0.99
UBR4-214ENST00000486515 ALDH1L2Q3SY69 923 aa8.88□□□□□ -0.99
UBR4-214ENST00000486515 TRMT2AQ8IZ69 625 aaKnown RBP8.88□□□□□ -0.99
UBR4-214ENST00000486515 SMC1BQ8NDV3 1235 aa8.88□□□□□ -0.99
UBR4-214ENST00000486515 ATG3Q9NT62 314 aa8.88□□□□□ -0.99
UBR4-214ENST00000486515 ASAP1Q9ULH1 1129 aa8.88□□□□□ -0.99
UBR4-214ENST00000486515 PALLDQ8WX93 1383 aa8.87□□□□□ -0.99
UBR4-214ENST00000486515 KIF16BQ96L93 1317 aa8.87□□□□□ -0.99
UBR4-214ENST00000486515 ZNF827Q17R98 1081 aa8.87□□□□□ -0.99
UBR4-214ENST00000486515 C8orf58Q8NAV2 365 aa8.87□□□□□ -0.99
UBR4-214ENST00000486515 NECTIN2Q92692 538 aa8.87□□□□□ -0.99
UBR4-214ENST00000486515 FRAT1Q92837 279 aaPredicted RBP8.87□□□□□ -0.99
UBR4-214ENST00000486515 ZNF496Q96IT1 587 aaPredicted RBP8.87□□□□□ -0.99
UBR4-214ENST00000486515 DBF4Q9UBU7 674 aaPredicted RBP8.87□□□□□ -0.99
UBR4-214ENST00000486515 HEG1Q9ULI3 1381 aa8.86□□□□□ -0.99
UBR4-214ENST00000486515 DOT1LQ8TEK3 1739 aa8.86□□□□□ -0.99
UBR4-214ENST00000486515 LOC102724428A0A0B4J2F2 783 aa8.86□□□□□ -0.99
UBR4-214ENST00000486515 KCNQ3O43525 872 aa8.86□□□□□ -0.99
UBR4-214ENST00000486515 VAMP4O75379 141 aa8.86□□□□□ -0.99
UBR4-214ENST00000486515 DDX58O95786 925 aaKnown RBP8.86□□□□□ -0.99
UBR4-214ENST00000486515 SIK1P57059 783 aa8.86□□□□□ -0.99
UBR4-214ENST00000486515 CCNL1Q9UK58 526 aaPredicted RBP8.86□□□□□ -0.99
UBR4-214ENST00000486515 MRC1P22897 1456 aa8.85□□□□□ -0.99
UBR4-214ENST00000486515 SLC4A2P04920 1241 aa8.85□□□□□ -0.99
UBR4-214ENST00000486515 RARSP54136 660 aaKnown RBP8.85□□□□□ -0.99
UBR4-214ENST00000486515 SLC27A3Q5K4L6 730 aa8.85□□□□□ -0.99
UBR4-214ENST00000486515 FTSJ3Q8IY81 847 aaKnown RBP8.85□□□□□ -0.99
UBR4-214ENST00000486515 TSPYL6Q8N831 410 aa8.85□□□□□ -0.99
UBR4-214ENST00000486515 HYPKQ9NX55 129 aa8.85□□□□□ -0.99
UBR4-214ENST00000486515 ZNF330Q9Y3S2 320 aaPredicted RBP8.85□□□□□ -0.99
UBR4-214ENST00000486515 CD2APQ9Y5K6 639 aa8.85□□□□□ -0.99
UBR4-214ENST00000486515 SCN11AQ9UI33 1791 aa8.85□□□□□ -0.99
UBR4-214ENST00000486515 ERBB4Q15303 1308 aa8.84□□□□□ -0.99
UBR4-214ENST00000486515 SIPA1L3O60292 1781 aaPredicted RBP8.84□□□□□ -0.99
UBR4-214ENST00000486515 MYL6BP14649 208 aa8.84□□□□□ -0.99
UBR4-214ENST00000486515 KRT24Q2M2I5 525 aa8.84□□□□□ -0.99
UBR4-214ENST00000486515 AK7Q96M32 723 aa8.84□□□□□ -0.99
UBR4-214ENST00000486515 BCL2L13Q9BXK5 485 aa8.84□□□□□ -0.99
UBR4-214ENST00000486515 API5Q9BZZ5 524 aaKnown RBP8.84□□□□□ -0.99
UBR4-214ENST00000486515 ADAMTS7Q9UKP4 1686 aa8.84□□□□□ -0.99
UBR4-214ENST00000486515 TCERG1O14776 1098 aaKnown RBP8.83□□□□□ -1
UBR4-214ENST00000486515 FKBP5Q13451 457 aaPredicted RBP8.83□□□□□ -1
UBR4-214ENST00000486515 ZKSCAN2Q63HK3 967 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms