RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 STK32BQ9NY57 414 aa14.77□□□□□ -0.05
NUP50-216ENST00000486184 UBR3Q6ZT12 1888 aa14.76□□□□□ -0.05
NUP50-216ENST00000486184 ZNF521Q96K83 1311 aa14.76□□□□□ -0.05
NUP50-216ENST00000486184 STARD3NLO95772 234 aa14.76□□□□□ -0.05
NUP50-216ENST00000486184 ITPK1Q13572 414 aa14.76□□□□□ -0.05
NUP50-216ENST00000486184 DNAJC10Q8IXB1 793 aa14.76□□□□□ -0.05
NUP50-216ENST00000486184 TSR2Q969E8 191 aaKnown RBP14.76□□□□□ -0.05
NUP50-216ENST00000486184 AK7Q96M32 723 aa14.76□□□□□ -0.05
NUP50-216ENST00000486184 E9PSI1 815 aa14.75□□□□□ -0.05
NUP50-216ENST00000486184 SLC4A9Q96Q91 983 aa14.75□□□□□ -0.05
NUP50-216ENST00000486184 MYH14Q7Z406 1995 aaKnown RBP14.74□□□□□ -0.05
NUP50-216ENST00000486184 ZBED9Q6R2W3 1325 aa14.74□□□□□ -0.05
NUP50-216ENST00000486184 FANCIQ9NVI1 1328 aa14.74□□□□□ -0.05
NUP50-216ENST00000486184 LINC00116Q8NCU8 138 aa14.74□□□□□ -0.05
NUP50-216ENST00000486184 YTHDC1Q96MU7 727 aaKnown RBP14.74□□□□□ -0.05
NUP50-216ENST00000486184 CNTNAP4Q9C0A0 1308 aa14.73□□□□□ -0.05
NUP50-216ENST00000486184 GIGYF1O75420 1035 aaPredicted RBP14.73□□□□□ -0.05
NUP50-216ENST00000486184 NPM2Q86SE8 214 aaKnown RBP14.73□□□□□ -0.05
NUP50-216ENST00000486184 TFCP2L1Q9NZI6 479 aa14.73□□□□□ -0.05
NUP50-216ENST00000486184 GNPATO15228 680 aa14.72□□□□□ -0.05
NUP50-216ENST00000486184 CYP19A1P11511 503 aaPredicted RBP14.72□□□□□ -0.05
NUP50-216ENST00000486184 CRKLP46109 303 aaKnown RBP14.72□□□□□ -0.05
NUP50-216ENST00000486184 SLC15A2Q16348 729 aa14.72□□□□□ -0.05
NUP50-216ENST00000486184 CHMP4AQ9BY43 222 aa14.72□□□□□ -0.05
NUP50-216ENST00000486184 CCDC87Q9NVE4 849 aa14.72□□□□□ -0.05
NUP50-216ENST00000486184 PRAMEF22A3QJZ6 481 aa14.71□□□□□ -0.05
NUP50-216ENST00000486184 HOXB7P09629 217 aa14.71□□□□□ -0.05
NUP50-216ENST00000486184 EIF2S2P20042 333 aaKnown RBP14.71□□□□□ -0.05
NUP50-216ENST00000486184 RC3H1Q5TC82 1133 aaKnown RBP14.71□□□□□ -0.05
NUP50-216ENST00000486184 DUSP27Q5VZP5 1158 aa14.71□□□□□ -0.05
NUP50-216ENST00000486184 ANO8Q9HCE9 1232 aaPredicted RBP14.71□□□□□ -0.05
NUP50-216ENST00000486184 RTCBQ9Y3I0 505 aaKnown RBP14.71□□□□□ -0.05
NUP50-216ENST00000486184 C4AP0C0L4 1744 aa14.71□□□□□ -0.05
NUP50-216ENST00000486184 CACNA1FO60840 1977 aa14.71□□□□□ -0.06
NUP50-216ENST00000486184 SOS1Q07889 1333 aaPredicted RBP14.7□□□□□ -0.06
NUP50-216ENST00000486184 ELL2O00472 640 aaPredicted RBP14.7□□□□□ -0.06
NUP50-216ENST00000486184 SLFN5Q08AF3 891 aa14.7□□□□□ -0.06
NUP50-216ENST00000486184 ZNF827Q17R98 1081 aa14.7□□□□□ -0.06
NUP50-216ENST00000486184 KRT24Q2M2I5 525 aa14.7□□□□□ -0.06
NUP50-216ENST00000486184 AKT1S1Q96B36 256 aa14.7□□□□□ -0.06
NUP50-216ENST00000486184 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
NUP50-216ENST00000486184 ZNF330Q9Y3S2 320 aaPredicted RBP14.7□□□□□ -0.06
NUP50-216ENST00000486184 USP16Q9Y5T5 823 aa14.7□□□□□ -0.06
NUP50-216ENST00000486184 PHF14O94880 888 aa14.69□□□□□ -0.06
NUP50-216ENST00000486184 CANXP27824 592 aaKnown RBP14.69□□□□□ -0.06
NUP50-216ENST00000486184 EXOSC9Q06265 439 aaKnown RBP14.69□□□□□ -0.06
NUP50-216ENST00000486184 TWISTNBQ3B726 338 aaPredicted RBP14.69□□□□□ -0.06
NUP50-216ENST00000486184 HDGFL1Q5TGJ6 251 aa14.69□□□□□ -0.06
NUP50-216ENST00000486184 FLAD1Q8NFF5 587 aa14.69□□□□□ -0.06
NUP50-216ENST00000486184 CDCA7LQ96GN5 454 aa14.69□□□□□ -0.06
NUP50-216ENST00000486184 RPS6KA4O75676 772 aa14.68□□□□□ -0.06
NUP50-216ENST00000486184 R3HDM1Q15032 1099 aaKnown RBP14.68□□□□□ -0.06
NUP50-216ENST00000486184 C8orf58Q8NAV2 365 aa14.68□□□□□ -0.06
NUP50-216ENST00000486184 NECTIN2Q92692 538 aa14.68□□□□□ -0.06
NUP50-216ENST00000486184 ZBTB1Q9Y2K1 713 aa14.68□□□□□ -0.06
NUP50-216ENST00000486184 ERBB4Q15303 1308 aa14.67□□□□□ -0.06
NUP50-216ENST00000486184 PSDA5PKW4 1024 aaPredicted RBP14.67□□□□□ -0.06
NUP50-216ENST00000486184 A1BGP04217 495 aa14.67□□□□□ -0.06
NUP50-216ENST00000486184 SSFA2P28290 1259 aa14.67□□□□□ -0.06
NUP50-216ENST00000486184 CACNB1Q02641 598 aaPredicted RBP14.67□□□□□ -0.06
NUP50-216ENST00000486184 TRAPPC3LQ5T215 181 aa14.67□□□□□ -0.06
NUP50-216ENST00000486184 INTS5Q6P9B9 1019 aaKnown RBP14.67□□□□□ -0.06
NUP50-216ENST00000486184 COL15A1P39059 1388 aa14.67□□□□□ -0.06
NUP50-216ENST00000486184 CASZ1Q86V15 1759 aa14.67□□□□□ -0.06
NUP50-216ENST00000486184 A0A087WZG4 1122 aa14.66□□□□□ -0.06
NUP50-216ENST00000486184 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.66□□□□□ -0.06
NUP50-216ENST00000486184 ATXN8OSP0DMR3 200 aa14.66□□□□□ -0.06
NUP50-216ENST00000486184 CCDC30Q5VVM6 783 aa14.66□□□□□ -0.06
NUP50-216ENST00000486184 TSPYL6Q8N831 410 aa14.66□□□□□ -0.06
NUP50-216ENST00000486184 ARXQ96QS3 562 aa14.66□□□□□ -0.06
NUP50-216ENST00000486184 STK31Q9BXU1 1019 aa14.66□□□□□ -0.06
NUP50-216ENST00000486184 BCORQ6W2J9 1755 aa14.65□□□□□ -0.06
NUP50-216ENST00000486184 MYL6BP14649 208 aa14.65□□□□□ -0.06
NUP50-216ENST00000486184 RFC4P35249 363 aa14.65□□□□□ -0.06
NUP50-216ENST00000486184 IL6STP40189 918 aaPredicted RBP14.65□□□□□ -0.06
NUP50-216ENST00000486184 PIP4K2AP48426 406 aaPredicted RBP14.65□□□□□ -0.06
NUP50-216ENST00000486184 DBF4Q9UBU7 674 aaPredicted RBP14.65□□□□□ -0.06
NUP50-216ENST00000486184 PNPLA7Q6ZV29 1317 aa14.65□□□□□ -0.06
NUP50-216ENST00000486184 SCN7AQ01118 1682 aa14.65□□□□□ -0.06
NUP50-216ENST00000486184 CHPF2Q9P2E5 772 aa14.64□□□□□ -0.07
NUP50-216ENST00000486184 ZPR1O75312 459 aa14.63□□□□□ -0.07
NUP50-216ENST00000486184 TRMT2AQ8IZ69 625 aaKnown RBP14.63□□□□□ -0.07
NUP50-216ENST00000486184 DDX21Q9NR30 783 aaKnown RBP eCLIP14.63□□□□□ -0.07
NUP50-216ENST00000486184 NUP98P52948 1817 aa14.62□□□□□ -0.07
NUP50-216ENST00000486184 NBPF26B4DH59 902 aa14.62□□□□□ -0.07
NUP50-216ENST00000486184 VAMP4O75379 141 aa14.62□□□□□ -0.07
NUP50-216ENST00000486184 EIF5P55010 431 aaKnown RBP14.62□□□□□ -0.07
NUP50-216ENST00000486184 NBPF10Q6P3W6 841 aaKnown RBP14.62□□□□□ -0.07
NUP50-216ENST00000486184 KIF6Q6ZMV9 814 aa14.62□□□□□ -0.07
NUP50-216ENST00000486184 COL23A1Q86Y22 540 aaPredicted RBP14.62□□□□□ -0.07
NUP50-216ENST00000486184 NBPF15Q8N660 670 aa14.62□□□□□ -0.07
NUP50-216ENST00000486184 ARHGEF1Q92888 912 aaKnown RBP14.62□□□□□ -0.07
NUP50-216ENST00000486184 HYPKQ9NX55 129 aa14.62□□□□□ -0.07
NUP50-216ENST00000486184 CT47B1P0C2W7 299 aaPredicted RBP14.61□□□□□ -0.07
NUP50-216ENST00000486184 SMIM5Q71RC9 77 aa14.61□□□□□ -0.07
NUP50-216ENST00000486184 DZIP3Q86Y13 1208 aaKnown RBP14.61□□□□□ -0.07
NUP50-216ENST00000486184 ANKRD36CQ5JPF3 1778 aa14.6□□□□□ -0.07
NUP50-216ENST00000486184 ARFGEF2Q9Y6D5 1785 aa14.6□□□□□ -0.07
NUP50-216ENST00000486184 TCERG1O14776 1098 aaKnown RBP14.6□□□□□ -0.07
NUP50-216ENST00000486184 ANXA1P04083 346 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms