RNA–Protein interactions for RNA: ENST00000484806.1

SFI1-223, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 567 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-223	ENST00000484806	SLC4A2	P04920	1241 aa		10.25	□□□□□ -0.77
SFI1-223	ENST00000484806	ATF7IP	Q6VMQ6	1270 aa		10.25	□□□□□ -0.77
SFI1-223	ENST00000484806	RBM42	Q9BTD8	480 aa	Known RBP	10.25	□□□□□ -0.77
SFI1-223	ENST00000484806	CHMP4B	Q9H444	224 aa	Known RBP	10.25	□□□□□ -0.77
SFI1-223	ENST00000484806	HYPK	Q9NX55	129 aa		10.25	□□□□□ -0.77
SFI1-223	ENST00000484806	ASAP1	Q9ULH1	1129 aa		10.25	□□□□□ -0.77
SFI1-223	ENST00000484806	DDX58	O95786	925 aa	Known RBP	10.24	□□□□□ -0.77
SFI1-223	ENST00000484806	NPM2	Q86SE8	214 aa	Known RBP	10.24	□□□□□ -0.77
SFI1-223	ENST00000484806	DZIP1L	Q8IYY4	767 aa	Known RBP	10.24	□□□□□ -0.77
SFI1-223	ENST00000484806	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.24	□□□□□ -0.77
SFI1-223	ENST00000484806	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
SFI1-223	ENST00000484806	NOB1	Q9ULX3	412 aa	Known RBP	10.24	□□□□□ -0.77
SFI1-223	ENST00000484806	PLIN1	O60240	522 aa		10.23	□□□□□ -0.77
SFI1-223	ENST00000484806	FLII	Q13045	1269 aa		10.23	□□□□□ -0.77
SFI1-223	ENST00000484806	AAMP	Q13685	434 aa		10.23	□□□□□ -0.77
SFI1-223	ENST00000484806	FKBP8	Q14318	412 aa		10.23	□□□□□ -0.77
SFI1-223	ENST00000484806	POTEA	Q6S8J7	498 aa		10.23	□□□□□ -0.77
SFI1-223	ENST00000484806	NECTIN2	Q92692	538 aa		10.23	□□□□□ -0.77
SFI1-223	ENST00000484806	CHPF2	Q9P2E5	772 aa		10.23	□□□□□ -0.77
SFI1-223	ENST00000484806	PXDNL	A1KZ92	1463 aa		10.23	□□□□□ -0.77
SFI1-223	ENST00000484806	LY75	O60449	1722 aa		10.22	□□□□□ -0.77
SFI1-223	ENST00000484806	TJP1	Q07157	1748 aa		10.22	□□□□□ -0.77
SFI1-223	ENST00000484806	LOC102724428	A0A0B4J2F2	783 aa		10.22	□□□□□ -0.77
SFI1-223	ENST00000484806	TCERG1	O14776	1098 aa	Known RBP	10.22	□□□□□ -0.77
SFI1-223	ENST00000484806	TRIM27	P14373	513 aa		10.22	□□□□□ -0.77
SFI1-223	ENST00000484806	SIK1	P57059	783 aa		10.22	□□□□□ -0.77
SFI1-223	ENST00000484806	FKBP5	Q13451	457 aa	Predicted RBP	10.22	□□□□□ -0.77
SFI1-223	ENST00000484806	RGS17	Q9UGC6	210 aa	Predicted RBP	10.22	□□□□□ -0.77
SFI1-223	ENST00000484806	GTF3C3	Q9Y5Q9	886 aa		10.22	□□□□□ -0.77
SFI1-223	ENST00000484806	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.21	□□□□□ -0.77
SFI1-223	ENST00000484806	KCNQ2	O43526	872 aa		10.21	□□□□□ -0.77
SFI1-223	ENST00000484806	ATP6V1A	P38606	617 aa		10.21	□□□□□ -0.77
SFI1-223	ENST00000484806	RGPD3	A6NKT7	1758 aa	Predicted RBP	10.2	□□□□□ -0.78
SFI1-223	ENST00000484806	ABCC4	O15439	1325 aa		10.2	□□□□□ -0.78
SFI1-223	ENST00000484806	COL5A3	P25940	1745 aa	Predicted RBP	10.2	□□□□□ -0.78
SFI1-223	ENST00000484806	CCT4	P50991	539 aa	Known RBP	10.2	□□□□□ -0.78
SFI1-223	ENST00000484806	IRX6	P78412	446 aa	Predicted RBP	10.2	□□□□□ -0.78
SFI1-223	ENST00000484806	MVP	Q14764	893 aa	Known RBP	10.2	□□□□□ -0.78
SFI1-223	ENST00000484806	FAM182B	Q5T319	152 aa		10.2	□□□□□ -0.78
SFI1-223	ENST00000484806	RGPD4	Q7Z3J3	1758 aa		10.2	□□□□□ -0.78
SFI1-223	ENST00000484806	DNAJC10	Q8IXB1	793 aa		10.2	□□□□□ -0.78
SFI1-223	ENST00000484806	DDX19B	Q9UMR2	479 aa		10.2	□□□□□ -0.78
SFI1-223	ENST00000484806	USP16	Q9Y5T5	823 aa		10.2	□□□□□ -0.78
SFI1-223	ENST00000484806	PRAMEF22	A3QJZ6	481 aa		10.19	□□□□□ -0.78
SFI1-223	ENST00000484806	TRIM37	O94972	964 aa		10.19	□□□□□ -0.78
SFI1-223	ENST00000484806	MYL6B	P14649	208 aa		10.19	□□□□□ -0.78
SFI1-223	ENST00000484806	SLC27A3	Q5K4L6	730 aa		10.19	□□□□□ -0.78
SFI1-223	ENST00000484806	ITPRIP	Q8IWB1	547 aa		10.19	□□□□□ -0.78
SFI1-223	ENST00000484806	CLUAP1	Q96AJ1	413 aa		10.19	□□□□□ -0.78
SFI1-223	ENST00000484806	RREB1	Q92766	1687 aa		10.18	□□□□□ -0.78
SFI1-223	ENST00000484806	CNTNAP4	Q9C0A0	1308 aa		10.18	□□□□□ -0.78
SFI1-223	ENST00000484806	CYP19A1	P11511	503 aa	Predicted RBP	10.18	□□□□□ -0.78
SFI1-223	ENST00000484806	IL6ST	P40189	918 aa	Predicted RBP	10.18	□□□□□ -0.78
SFI1-223	ENST00000484806	NEXN	Q0ZGT2	675 aa		10.18	□□□□□ -0.78
SFI1-223	ENST00000484806	PDIA6	Q15084	440 aa		10.18	□□□□□ -0.78
SFI1-223	ENST00000484806	KIF6	Q6ZMV9	814 aa		10.18	□□□□□ -0.78
SFI1-223	ENST00000484806	PANK1	Q8TE04	598 aa		10.18	□□□□□ -0.78
SFI1-223	ENST00000484806	CRBN	Q96SW2	442 aa		10.18	□□□□□ -0.78
SFI1-223	ENST00000484806	CCNL1	Q9UK58	526 aa	Predicted RBP	10.18	□□□□□ -0.78
SFI1-223	ENST00000484806	TAF1L	Q8IZX4	1826 aa		10.18	□□□□□ -0.78
SFI1-223	ENST00000484806	TNS1	Q9HBL0	1735 aa	Known RBP	10.17	□□□□□ -0.78
SFI1-223	ENST00000484806		A0A087WZG4	1122 aa		10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	AIMP1	Q12904	312 aa	Known RBP	10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	SF3B2	Q13435	895 aa	Known RBP	10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	C20orf194	Q5TEA3	1177 aa		10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	SLC4A10	Q6U841	1118 aa		10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	KSR2	Q6VAB6	950 aa		10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	G2E3	Q7L622	706 aa		10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	RIC3	Q7Z5B4	369 aa		10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	TMEM57	Q8N5G2	664 aa		10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	XAGE3	Q8WTP9	111 aa		10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	DNAAF4	Q8WXU2	420 aa		10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	PHAX	Q9H814	394 aa	Known RBP	10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	CCDC87	Q9NVE4	849 aa		10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	PPP4R2	Q9NY27	417 aa		10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	HDAC5	Q9UQL6	1122 aa		10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	COG6	Q9Y2V7	657 aa		10.17	□□□□□ -0.78
SFI1-223	ENST00000484806	ATP10D	Q9P241	1426 aa		10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	ARFGEF2	Q9Y6D5	1785 aa		10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	PI4KAP2	A4QPH2	592 aa		10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	ANXA1	P04083	346 aa		10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	A1BG	P04217	495 aa		10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	CRKL	P46109	303 aa	Known RBP	10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	PROSER3	Q2NL68	480 aa		10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	RC3H1	Q5TC82	1133 aa	Known RBP	10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	INTS3	Q68E01	1043 aa	Known RBP	10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	COPS6	Q7L5N1	327 aa		10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	PI4KAP1	Q8N8J0	262 aa		10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	EXOC6	Q8TAG9	804 aa		10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	SLC4A9	Q96Q91	983 aa		10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.16	□□□□□ -0.78
SFI1-223	ENST00000484806	PLSCR1	O15162	318 aa		10.15	□□□□□ -0.78
SFI1-223	ENST00000484806	APBA3	O96018	575 aa		10.15	□□□□□ -0.78
SFI1-223	ENST00000484806	RLBP1	P12271	317 aa		10.15	□□□□□ -0.78
SFI1-223	ENST00000484806	HSP90AB3P	Q58FF7	597 aa		10.15	□□□□□ -0.78
SFI1-223	ENST00000484806	ANKRD13D	Q6ZTN6	518 aa		10.15	□□□□□ -0.78
SFI1-223	ENST00000484806	PLBD2	Q8NHP8	589 aa		10.15	□□□□□ -0.78
SFI1-223	ENST00000484806	AK7	Q96M32	723 aa		10.15	□□□□□ -0.78
SFI1-223	ENST00000484806	SRCIN1	Q9C0H9	1055 aa		10.15	□□□□□ -0.78
SFI1-223	ENST00000484806	ZBTB1	Q9Y2K1	713 aa		10.15	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms