RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 PDGFDQ9GZP0 370 aaPredicted RBP14.12□□□□□ -0.15
ATG4B-219ENST00000479941 CCDC87Q9NVE4 849 aa14.12□□□□□ -0.15
ATG4B-219ENST00000479941 SENP3-EIF4A1A0A087X0R7 540 aa14.11□□□□□ -0.15
ATG4B-219ENST00000479941 MSH5O43196 834 aa14.11□□□□□ -0.15
ATG4B-219ENST00000479941 GIGYF1O75420 1035 aaPredicted RBP14.11□□□□□ -0.15
ATG4B-219ENST00000479941 PHF14O94880 888 aa14.11□□□□□ -0.15
ATG4B-219ENST00000479941 INTS5Q6P9B9 1019 aaKnown RBP14.11□□□□□ -0.15
ATG4B-219ENST00000479941 MTFR1LQ9H019 292 aa14.11□□□□□ -0.15
ATG4B-219ENST00000479941 CASZ1Q86V15 1759 aa14.11□□□□□ -0.15
ATG4B-219ENST00000479941 UBR3Q6ZT12 1888 aa14.1□□□□□ -0.15
ATG4B-219ENST00000479941 AMIGO3Q86WK7 504 aa14.1□□□□□ -0.15
ATG4B-219ENST00000479941 WDR63Q8IWG1 891 aa14.1□□□□□ -0.15
ATG4B-219ENST00000479941 SPON1Q9HCB6 807 aa14.1□□□□□ -0.15
ATG4B-219ENST00000479941 ZBTB1Q9Y2K1 713 aa14.1□□□□□ -0.15
ATG4B-219ENST00000479941 SALL2Q9Y467 1007 aaPredicted RBP14.1□□□□□ -0.15
ATG4B-219ENST00000479941 USP16Q9Y5T5 823 aa14.1□□□□□ -0.15
ATG4B-219ENST00000479941 MYH14Q7Z406 1995 aaKnown RBP14.1□□□□□ -0.15
ATG4B-219ENST00000479941 TUBGCP6Q96RT7 1819 aa14.1□□□□□ -0.15
ATG4B-219ENST00000479941 IL16Q14005 1332 aa14.1□□□□□ -0.15
ATG4B-219ENST00000479941 PRAMEF22A3QJZ6 481 aa14.09□□□□□ -0.15
ATG4B-219ENST00000479941 ZBTB7AO95365 584 aa14.09□□□□□ -0.15
ATG4B-219ENST00000479941 ARHGEF1Q92888 912 aaKnown RBP14.09□□□□□ -0.15
ATG4B-219ENST00000479941 MBIPQ9NS73 344 aa14.09□□□□□ -0.15
ATG4B-219ENST00000479941 CANXP27824 592 aaKnown RBP14.08□□□□□ -0.16
ATG4B-219ENST00000479941 IL6STP40189 918 aaPredicted RBP14.08□□□□□ -0.16
ATG4B-219ENST00000479941 SMIM5Q71RC9 77 aa14.08□□□□□ -0.16
ATG4B-219ENST00000479941 SOS1Q07889 1333 aaPredicted RBP14.08□□□□□ -0.16
ATG4B-219ENST00000479941 A1BGP04217 495 aa14.07□□□□□ -0.16
ATG4B-219ENST00000479941 RFC4P35249 363 aa14.07□□□□□ -0.16
ATG4B-219ENST00000479941 EIF5P55010 431 aaKnown RBP14.07□□□□□ -0.16
ATG4B-219ENST00000479941 NPM2Q86SE8 214 aaKnown RBP14.07□□□□□ -0.16
ATG4B-219ENST00000479941 ATF5Q9Y2D1 282 aaPredicted RBP14.07□□□□□ -0.16
ATG4B-219ENST00000479941 A0A087WZG4 1122 aa14.06□□□□□ -0.16
ATG4B-219ENST00000479941 HOXB7P09629 217 aa14.06□□□□□ -0.16
ATG4B-219ENST00000479941 COL15A1P39059 1388 aa14.06□□□□□ -0.16
ATG4B-219ENST00000479941 ERBB4Q15303 1308 aa14.05□□□□□ -0.16
ATG4B-219ENST00000479941 ZNF521Q96K83 1311 aa14.05□□□□□ -0.16
ATG4B-219ENST00000479941 ZPR1O75312 459 aa14.04□□□□□ -0.16
ATG4B-219ENST00000479941 POLD1P28340 1107 aa14.04□□□□□ -0.16
ATG4B-219ENST00000479941 PTGER2P43116 358 aa14.04□□□□□ -0.16
ATG4B-219ENST00000479941 NLGN1Q8N2Q7 840 aa14.04□□□□□ -0.16
ATG4B-219ENST00000479941 NARFQ9UHQ1 456 aa14.04□□□□□ -0.16
ATG4B-219ENST00000479941 LRP5O75197 1615 aa14.04□□□□□ -0.16
ATG4B-219ENST00000479941 LAMB4A4D0S4 1761 aa14.04□□□□□ -0.16
ATG4B-219ENST00000479941 EIF2S2P20042 333 aaKnown RBP14.03□□□□□ -0.16
ATG4B-219ENST00000479941 KRT24Q2M2I5 525 aa14.03□□□□□ -0.16
ATG4B-219ENST00000479941 DUSP27Q5VZP5 1158 aa14.03□□□□□ -0.16
ATG4B-219ENST00000479941 TSR2Q969E8 191 aaKnown RBP14.03□□□□□ -0.16
ATG4B-219ENST00000479941 SGIP1Q9BQI5 828 aa14.03□□□□□ -0.16
ATG4B-219ENST00000479941 CHMP4AQ9BY43 222 aa14.03□□□□□ -0.16
ATG4B-219ENST00000479941 MYH16Q9H6N6 1097 aa14.03□□□□□ -0.16
ATG4B-219ENST00000479941 ZNF330Q9Y3S2 320 aaPredicted RBP14.03□□□□□ -0.16
ATG4B-219ENST00000479941 USP42Q9H9J4 1324 aaKnown RBP14.03□□□□□ -0.16
ATG4B-219ENST00000479941 NBPF26B4DH59 902 aa14.02□□□□□ -0.17
ATG4B-219ENST00000479941 GYS1P13807 737 aa14.02□□□□□ -0.17
ATG4B-219ENST00000479941 PIP4K2AP48426 406 aaPredicted RBP14.02□□□□□ -0.17
ATG4B-219ENST00000479941 MSL1Q68DK7 614 aa14.02□□□□□ -0.17
ATG4B-219ENST00000479941 NBPF10Q6P3W6 841 aaKnown RBP14.02□□□□□ -0.17
ATG4B-219ENST00000479941 NBPF15Q8N660 670 aa14.02□□□□□ -0.17
ATG4B-219ENST00000479941 FANCIQ9NVI1 1328 aa14.01□□□□□ -0.17
ATG4B-219ENST00000479941 GOLGA2Q08379 1002 aa14.01□□□□□ -0.17
ATG4B-219ENST00000479941 HDGFL1Q5TGJ6 251 aa14.01□□□□□ -0.17
ATG4B-219ENST00000479941 USPL1Q5W0Q7 1092 aa14.01□□□□□ -0.17
ATG4B-219ENST00000479941 C8orf58Q8NAV2 365 aa14.01□□□□□ -0.17
ATG4B-219ENST00000479941 PPP1R1BQ9UD71 204 aaPredicted RBP14.01□□□□□ -0.17
ATG4B-219ENST00000479941 SRP68Q9UHB9 627 aaKnown RBP14.01□□□□□ -0.17
ATG4B-219ENST00000479941 C4AP0C0L4 1744 aa14.01□□□□□ -0.17
ATG4B-219ENST00000479941 COL24A1Q17RW2 1714 aa14.01□□□□□ -0.17
ATG4B-219ENST00000479941 ELL2O00472 640 aaPredicted RBP14□□□□□ -0.17
ATG4B-219ENST00000479941 DZIP3Q86Y13 1208 aaKnown RBP14□□□□□ -0.17
ATG4B-219ENST00000479941 ARXQ96QS3 562 aa14□□□□□ -0.17
ATG4B-219ENST00000479941 SPINK5Q9NQ38 1064 aaPredicted RBP14□□□□□ -0.17
ATG4B-219ENST00000479941 TBC1D2BQ9UPU7 963 aa14□□□□□ -0.17
ATG4B-219ENST00000479941 E9PSI1 815 aa13.99□□□□□ -0.17
ATG4B-219ENST00000479941 MYL6BP14649 208 aa13.99□□□□□ -0.17
ATG4B-219ENST00000479941 PDIA6Q15084 440 aa13.99□□□□□ -0.17
ATG4B-219ENST00000479941 NECTIN2Q92692 538 aa13.99□□□□□ -0.17
ATG4B-219ENST00000479941 DDX21Q9NR30 783 aaKnown RBP eCLIP13.99□□□□□ -0.17
ATG4B-219ENST00000479941 DBF4Q9UBU7 674 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-219ENST00000479941 RGL2O15211 777 aa13.98□□□□□ -0.17
ATG4B-219ENST00000479941 FKBP8Q14318 412 aa13.98□□□□□ -0.17
ATG4B-219ENST00000479941 TWISTNBQ3B726 338 aaPredicted RBP13.98□□□□□ -0.17
ATG4B-219ENST00000479941 TSPYL6Q8N831 410 aa13.98□□□□□ -0.17
ATG4B-219ENST00000479941 CAMTA2O94983 1202 aa13.97□□□□□ -0.17
ATG4B-219ENST00000479941 MMP10P09238 476 aa13.97□□□□□ -0.17
ATG4B-219ENST00000479941 HNRNPUQ00839 825 aaKnown RBP eCLIP13.97□□□□□ -0.17
ATG4B-219ENST00000479941 CCDC30Q5VVM6 783 aa13.97□□□□□ -0.17
ATG4B-219ENST00000479941 CLEC4GQ6UXB4 293 aa13.97□□□□□ -0.17
ATG4B-219ENST00000479941 LRP10Q7Z4F1 713 aa13.97□□□□□ -0.17
ATG4B-219ENST00000479941 BCL2L12Q9HB09 334 aa13.97□□□□□ -0.17
ATG4B-219ENST00000479941 CHPF2Q9P2E5 772 aa13.97□□□□□ -0.17
ATG4B-219ENST00000479941 ZNF652Q9Y2D9 606 aa13.97□□□□□ -0.17
ATG4B-219ENST00000479941 ERVV-1B6SEH8 477 aa13.96□□□□□ -0.17
ATG4B-219ENST00000479941 TM4SF1P30408 202 aa13.96□□□□□ -0.17
ATG4B-219ENST00000479941 EXOSC9Q06265 439 aaKnown RBP13.96□□□□□ -0.17
ATG4B-219ENST00000479941 SLFN5Q08AF3 891 aa13.96□□□□□ -0.17
ATG4B-219ENST00000479941 PROSER3Q2NL68 480 aa13.96□□□□□ -0.17
ATG4B-219ENST00000479941 KIF6Q6ZMV9 814 aa13.96□□□□□ -0.17
ATG4B-219ENST00000479941 HYPKQ9NX55 129 aa13.96□□□□□ -0.17
ATG4B-219ENST00000479941 PARP3Q9Y6F1 533 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms