RNA–Protein interactions for RNA: ENST00000478848.1

FMR1-211, Transcript of fragile X mental retardation 1, humanhuman

TSL 2

Gene FMR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-211ENST00000478848 SZT2Q5T011 3432 aa12.3□□□□□ -0.44
FMR1-211ENST00000478848 RGPD2P0DJD1 1756 aa12.29□□□□□ -0.44
FMR1-211ENST00000478848 POLRMTO00411 1230 aaKnown RBP12.29□□□□□ -0.44
FMR1-211ENST00000478848 NBPF6Q5VWK0 638 aa12.29□□□□□ -0.44
FMR1-211ENST00000478848 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
FMR1-211ENST00000478848 NBPF4Q96M43 638 aa12.29□□□□□ -0.44
FMR1-211ENST00000478848 STAC3Q96MF2 364 aa12.29□□□□□ -0.44
FMR1-211ENST00000478848 CD163L1Q9NR16 1453 aa12.28□□□□□ -0.44
FMR1-211ENST00000478848 CEP290O15078 2479 aa12.28□□□□□ -0.44
FMR1-211ENST00000478848 RPS6KA4O75676 772 aa12.28□□□□□ -0.44
FMR1-211ENST00000478848 EPHX2P34913 555 aa12.28□□□□□ -0.44
FMR1-211ENST00000478848 TMOD3Q9NYL9 352 aa12.28□□□□□ -0.44
FMR1-211ENST00000478848 HACL1Q9UJ83 578 aa12.28□□□□□ -0.44
FMR1-211ENST00000478848 EVC2Q86UK5 1308 aa12.28□□□□□ -0.44
FMR1-211ENST00000478848 C21orf2O43822 256 aa12.27□□□□□ -0.45
FMR1-211ENST00000478848 HOXC9P31274 260 aa12.27□□□□□ -0.45
FMR1-211ENST00000478848 AMPHP49418 695 aa12.27□□□□□ -0.45
FMR1-211ENST00000478848 BRPF1P55201 1214 aaPredicted RBP12.27□□□□□ -0.45
FMR1-211ENST00000478848 CIAPIN1Q6FI81 312 aa12.27□□□□□ -0.45
FMR1-211ENST00000478848 C2CD5Q86YS7 1000 aa12.27□□□□□ -0.45
FMR1-211ENST00000478848 DICER1Q9UPY3 1922 aaKnown RBP12.27□□□□□ -0.45
FMR1-211ENST00000478848 SCN4AP35499 1836 aa12.26□□□□□ -0.45
FMR1-211ENST00000478848 PNMA8AQ86V59 439 aaPredicted RBP12.26□□□□□ -0.45
FMR1-211ENST00000478848 TAOK3Q9H2K8 898 aa12.26□□□□□ -0.45
FMR1-211ENST00000478848 FBLN1P23142 703 aa12.25□□□□□ -0.45
FMR1-211ENST00000478848 RC3H1Q5TC82 1133 aaKnown RBP12.25□□□□□ -0.45
FMR1-211ENST00000478848 CST9Q5W186 159 aa12.25□□□□□ -0.45
FMR1-211ENST00000478848 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
FMR1-211ENST00000478848 ATG3Q9NT62 314 aa12.25□□□□□ -0.45
FMR1-211ENST00000478848 TLL2Q9Y6L7 1015 aa12.25□□□□□ -0.45
FMR1-211ENST00000478848 MAP3K19Q56UN5 1328 aa12.25□□□□□ -0.45
FMR1-211ENST00000478848 H0YIN7 160 aa12.24□□□□□ -0.45
FMR1-211ENST00000478848 SLC4A9Q96Q91 983 aa12.24□□□□□ -0.45
FMR1-211ENST00000478848 CNTNAP4Q9C0A0 1308 aa12.24□□□□□ -0.45
FMR1-211ENST00000478848 USP42Q9H9J4 1324 aaKnown RBP12.24□□□□□ -0.45
FMR1-211ENST00000478848 ADAMTSL1Q8N6G6 1762 aa12.23□□□□□ -0.45
FMR1-211ENST00000478848 SBNO2Q9Y2G9 1366 aa12.23□□□□□ -0.45
FMR1-211ENST00000478848 RNF123Q5XPI4 1314 aa12.23□□□□□ -0.45
FMR1-211ENST00000478848 TRAF5O00463 557 aa12.23□□□□□ -0.45
FMR1-211ENST00000478848 TM4SF1P30408 202 aa12.23□□□□□ -0.45
FMR1-211ENST00000478848 ZNF622Q969S3 477 aaKnown RBP eCLIP12.23□□□□□ -0.453e-9■■■□□ 18.3
FMR1-211ENST00000478848 ZNF541Q9H0D2 1346 aa12.22□□□□□ -0.45
FMR1-211ENST00000478848 HPS5Q9UPZ3 1129 aa12.22□□□□□ -0.45
FMR1-211ENST00000478848 SMG6Q86US8 1419 aaKnown RBP12.21□□□□□ -0.45
FMR1-211ENST00000478848 KDRP35968 1356 aa12.21□□□□□ -0.45
FMR1-211ENST00000478848 PITPNM2Q9BZ72 1349 aa12.21□□□□□ -0.45
FMR1-211ENST00000478848 LTBP3Q9NS15 1303 aa12.21□□□□□ -0.45
FMR1-211ENST00000478848 MKI67P46013 3256 aaKnown RBP12.21□□□□□ -0.46
FMR1-211ENST00000478848 ADAMTS7Q9UKP4 1686 aa12.2□□□□□ -0.46
FMR1-211ENST00000478848 NKX1-1Q15270 411 aaPredicted RBP12.2□□□□□ -0.46
FMR1-211ENST00000478848 SAPCD2Q86UD0 394 aa12.2□□□□□ -0.46
FMR1-211ENST00000478848 ZIC5Q96T25 663 aa12.2□□□□□ -0.46
FMR1-211ENST00000478848 FER1L6Q2WGJ9 1857 aa12.2□□□□□ -0.46
FMR1-211ENST00000478848 DLEC1Q9Y238 1755 aa12.2□□□□□ -0.46
FMR1-211ENST00000478848 MON2Q7Z3U7 1717 aa12.2□□□□□ -0.46
FMR1-211ENST00000478848 MYH14Q7Z406 1995 aaKnown RBP12.19□□□□□ -0.46
FMR1-211ENST00000478848 CTU1Q7Z7A3 348 aaKnown RBP12.19□□□□□ -0.46
FMR1-211ENST00000478848 COLQQ9Y215 455 aaPredicted RBP12.19□□□□□ -0.46
FMR1-211ENST00000478848 ZPR1O75312 459 aa12.18□□□□□ -0.46
FMR1-211ENST00000478848 NFIXQ14938 502 aa12.18□□□□□ -0.46
FMR1-211ENST00000478848 USPL1Q5W0Q7 1092 aa12.18□□□□□ -0.46
FMR1-211ENST00000478848 BICDL1Q6ZP65 573 aa12.18□□□□□ -0.46
FMR1-211ENST00000478848 CARMIL3Q8ND23 1372 aa12.18□□□□□ -0.46
FMR1-211ENST00000478848 SERPINB2P05120 415 aa12.17□□□□□ -0.46
FMR1-211ENST00000478848 CRKLP46109 303 aaKnown RBP12.17□□□□□ -0.46
FMR1-211ENST00000478848 CELF2O95319 508 aaKnown RBP12.16□□□□□ -0.46
FMR1-211ENST00000478848 TMC1Q8TDI8 760 aa12.16□□□□□ -0.46
FMR1-211ENST00000478848 COL6A3P12111 3177 aa12.16□□□□□ -0.46
FMR1-211ENST00000478848 AFDNP55196 1824 aaKnown RBP12.16□□□□□ -0.46
FMR1-211ENST00000478848 TRPA1O75762 1119 aa12.15□□□□□ -0.46
FMR1-211ENST00000478848 NOGQ13253 232 aa12.15□□□□□ -0.46
FMR1-211ENST00000478848 RRS1Q15050 365 aaKnown RBP12.15□□□□□ -0.46
FMR1-211ENST00000478848 HDGFL2Q7Z4V5 671 aaPredicted RBP12.15□□□□□ -0.46
FMR1-211ENST00000478848 TRPM7Q96QT4 1865 aa12.14□□□□□ -0.47
FMR1-211ENST00000478848 COL5A3P25940 1745 aaPredicted RBP12.14□□□□□ -0.47
FMR1-211ENST00000478848 AKAP4Q5JQC9 854 aa12.14□□□□□ -0.47
FMR1-211ENST00000478848 ZNF277Q9NRM2 450 aaPredicted RBP12.14□□□□□ -0.47
FMR1-211ENST00000478848 SPG7Q9UQ90 795 aa12.14□□□□□ -0.47
FMR1-211ENST00000478848 COG3Q96JB2 828 aa12.13□□□□□ -0.47
FMR1-211ENST00000478848 HHIPL1Q96JK4 782 aa12.13□□□□□ -0.47
FMR1-211ENST00000478848 ZNF408Q9H9D4 720 aa12.13□□□□□ -0.47
FMR1-211ENST00000478848 SAGE1Q9NXZ1 904 aa12.13□□□□□ -0.47
FMR1-211ENST00000478848 KIAA0100Q14667 2235 aaKnown RBP12.13□□□□□ -0.47
FMR1-211ENST00000478848 EDC4Q6P2E9 1401 aaKnown RBP12.12□□□□□ -0.47
FMR1-211ENST00000478848 PTCD1O75127 700 aaKnown RBP12.12□□□□□ -0.47
FMR1-211ENST00000478848 SYNE4Q8N205 404 aa12.12□□□□□ -0.47
FMR1-211ENST00000478848 CCDC24Q8N4L8 307 aa12.12□□□□□ -0.47
FMR1-211ENST00000478848 RNF186Q9NXI6 227 aa12.12□□□□□ -0.47
FMR1-211ENST00000478848 RTL1A6NKG5 1358 aa12.11□□□□□ -0.47
FMR1-211ENST00000478848 LMOD1P29536 600 aaPredicted RBP12.11□□□□□ -0.47
FMR1-211ENST00000478848 EPS15P42566 896 aa12.11□□□□□ -0.47
FMR1-211ENST00000478848 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
FMR1-211ENST00000478848 HSP90AB2PQ58FF8 381 aa12.11□□□□□ -0.47
FMR1-211ENST00000478848 SOGA3Q5TF21 947 aa12.11□□□□□ -0.47
FMR1-211ENST00000478848 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
FMR1-211ENST00000478848 GPC2Q8N158 579 aa12.11□□□□□ -0.47
FMR1-211ENST00000478848 SLC12A5Q9H2X9 1139 aa12.11□□□□□ -0.47
FMR1-211ENST00000478848 GJA3Q9Y6H8 435 aa12.11□□□□□ -0.47
FMR1-211ENST00000478848 INSRP06213 1382 aa12.1□□□□□ -0.47
FMR1-211ENST00000478848 PHKG2P15735 406 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms