RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 GNAT3A8MTJ3 354 aa25.44■■□□□ 1.66
GMDS-204ENST00000476972 TM4SF1P30408 202 aa25.44■■□□□ 1.66
GMDS-204ENST00000476972 ZPR1O75312 459 aa25.43■■□□□ 1.66
GMDS-204ENST00000476972 CYP19A1P11511 503 aaPredicted RBP25.43■■□□□ 1.66
GMDS-204ENST00000476972 RALBP1Q15311 655 aa25.43■■□□□ 1.66
GMDS-204ENST00000476972 MYH14Q7Z406 1995 aaKnown RBP25.42■■□□□ 1.66
GMDS-204ENST00000476972 USPL1Q5W0Q7 1092 aa25.42■■□□□ 1.66
GMDS-204ENST00000476972 C4AP0C0L4 1744 aa25.41■■□□□ 1.66
GMDS-204ENST00000476972 POLRMTO00411 1230 aaKnown RBP25.41■■□□□ 1.66
GMDS-204ENST00000476972 CHRNA5P30532 468 aa25.41■■□□□ 1.66
GMDS-204ENST00000476972 DALRD3Q5D0E6 543 aaKnown RBP25.41■■□□□ 1.66
GMDS-204ENST00000476972 IL17REQ8NFR9 667 aa25.41■■□□□ 1.66
GMDS-204ENST00000476972 SOS1Q07889 1333 aaPredicted RBP25.4■■□□□ 1.66
GMDS-204ENST00000476972 C9orf131Q5VYM1 1079 aa25.4■■□□□ 1.66
GMDS-204ENST00000476972 CEMIPQ8WUJ3 1361 aa25.39■■□□□ 1.65
GMDS-204ENST00000476972 KIAA1551Q9HCM1 1747 aa25.38■■□□□ 1.65
GMDS-204ENST00000476972 KIF13BQ9NQT8 1826 aa25.38■■□□□ 1.65
GMDS-204ENST00000476972 N4BP2Q86UW6 1770 aaPredicted RBP25.37■■□□□ 1.65
GMDS-204ENST00000476972 TOMM70O94826 608 aa25.37■■□□□ 1.65
GMDS-204ENST00000476972 TEFQ10587 303 aa25.37■■□□□ 1.65
GMDS-204ENST00000476972 NMRK2Q9NPI5 230 aa25.37■■□□□ 1.65
GMDS-204ENST00000476972 NARFQ9UHQ1 456 aa25.37■■□□□ 1.65
GMDS-204ENST00000476972 ZBTB1Q9Y2K1 713 aa25.37■■□□□ 1.65
GMDS-204ENST00000476972 VSIG10Q8N0Z9 540 aa25.36■■□□□ 1.65
GMDS-204ENST00000476972 MYBBP1AQ9BQG0 1328 aaKnown RBP25.36■■□□□ 1.65
GMDS-204ENST00000476972 NFIXQ14938 502 aa25.35■■□□□ 1.65
GMDS-204ENST00000476972 DLG5Q8TDM6 1919 aa25.35■■□□□ 1.65
GMDS-204ENST00000476972 BCL2L12Q9HB09 334 aa25.34■■□□□ 1.65
GMDS-204ENST00000476972 CANXP27824 592 aaKnown RBP25.33■■□□□ 1.65
GMDS-204ENST00000476972 TTC5Q8N0Z6 440 aa25.32■■□□□ 1.64
GMDS-204ENST00000476972 PLEKHF1Q96S99 279 aa25.31■■□□□ 1.64
GMDS-204ENST00000476972 RNF181Q9P0P0 153 aa25.31■■□□□ 1.64
GMDS-204ENST00000476972 COL15A1P39059 1388 aa25.31■■□□□ 1.64
GMDS-204ENST00000476972 STARD3NLO95772 234 aa25.3■■□□□ 1.64
GMDS-204ENST00000476972 SERPINB2P05120 415 aa25.3■■□□□ 1.64
GMDS-204ENST00000476972 APLP1P51693 650 aa25.3■■□□□ 1.64
GMDS-204ENST00000476972 IFFO2Q5TF58 517 aa25.3■■□□□ 1.64
GMDS-204ENST00000476972 ZNF790Q6PG37 636 aa25.3■■□□□ 1.64
GMDS-204ENST00000476972 MCM10Q7L590 875 aa25.3■■□□□ 1.64
GMDS-204ENST00000476972 RTF1Q92541 710 aaKnown RBP25.3■■□□□ 1.64
GMDS-204ENST00000476972 NEFMP07197 916 aa25.29■■□□□ 1.64
GMDS-204ENST00000476972 EIF5P55010 431 aaKnown RBP25.28■■□□□ 1.64
GMDS-204ENST00000476972 DCTN1Q14203 1278 aa25.28■■□□□ 1.64
GMDS-204ENST00000476972 ZNF496Q96IT1 587 aaPredicted RBP25.28■■□□□ 1.64
GMDS-204ENST00000476972 HEG1Q9ULI3 1381 aa25.27■■□□□ 1.64
GMDS-204ENST00000476972 BTBD11A6QL63 1104 aa25.26■■□□□ 1.63
GMDS-204ENST00000476972 HTATSF1O43719 755 aaKnown RBP25.26■■□□□ 1.63
GMDS-204ENST00000476972 BICDL1Q6ZP65 573 aa25.26■■□□□ 1.63
GMDS-204ENST00000476972 PRKRIP1Q9H875 184 aaPredicted RBP25.26■■□□□ 1.63
GMDS-204ENST00000476972 C16orf71Q8IYS4 520 aaPredicted RBP25.25■■□□□ 1.63
GMDS-204ENST00000476972 RBM46Q8TBY0 533 aaKnown RBP25.25■■□□□ 1.63
GMDS-204ENST00000476972 KDM2BQ8NHM5 1336 aa25.25■■□□□ 1.63
GMDS-204ENST00000476972 MAPK8IP3Q9UPT6 1336 aa25.25■■□□□ 1.63
GMDS-204ENST00000476972 A0A087WZG4 1122 aa25.24■■□□□ 1.63
GMDS-204ENST00000476972 DNAJC5GQ8N7S2 189 aa25.24■■□□□ 1.63
GMDS-204ENST00000476972 TEX13AQ9BXU3 409 aaPredicted RBP25.24■■□□□ 1.63
GMDS-204ENST00000476972 PNNQ9H307 717 aaKnown RBP25.24■■□□□ 1.63
GMDS-204ENST00000476972 RRAGCQ9HB90 399 aa25.24■■□□□ 1.63
GMDS-204ENST00000476972 KCNQ3O43525 872 aa25.23■■□□□ 1.63
GMDS-204ENST00000476972 NFE2L2Q16236 605 aa25.23■■□□□ 1.63
GMDS-204ENST00000476972 C2CD5Q86YS7 1000 aa25.23■■□□□ 1.63
GMDS-204ENST00000476972 TTLL6Q8N841 843 aa25.23■■□□□ 1.63
GMDS-204ENST00000476972 FMNL2Q96PY5 1086 aa25.23■■□□□ 1.63
GMDS-204ENST00000476972 RASSF7Q02833 373 aa25.22■■□□□ 1.63
GMDS-204ENST00000476972 H0YIN7 160 aa25.21■■□□□ 1.63
GMDS-204ENST00000476972 TBC1D2BQ9UPU7 963 aa25.21■■□□□ 1.63
GMDS-204ENST00000476972 KDM3BQ7LBC6 1761 aa25.21■■□□□ 1.63
GMDS-204ENST00000476972 BRCA1P38398 1863 aaKnown RBP25.2■■□□□ 1.62
GMDS-204ENST00000476972 PRELPP51888 382 aa25.2■■□□□ 1.62
GMDS-204ENST00000476972 TBC1D9BQ66K14 1250 aa25.2■■□□□ 1.62
GMDS-204ENST00000476972 ZNF330Q9Y3S2 320 aaPredicted RBP25.2■■□□□ 1.62
GMDS-204ENST00000476972 A1BGP04217 495 aa25.19■■□□□ 1.62
GMDS-204ENST00000476972 LMNB1P20700 586 aa25.19■■□□□ 1.62
GMDS-204ENST00000476972 CARMIL3Q8ND23 1372 aa25.18■■□□□ 1.62
GMDS-204ENST00000476972 IL6STP40189 918 aaPredicted RBP25.18■■□□□ 1.62
GMDS-204ENST00000476972 FSTL1Q12841 308 aa25.18■■□□□ 1.62
GMDS-204ENST00000476972 ZNF316A6NFI3 1004 aaPredicted RBP25.17■■□□□ 1.62
GMDS-204ENST00000476972 CCDC24Q8N4L8 307 aa25.17■■□□□ 1.62
GMDS-204ENST00000476972 HTRA3P83110 453 aa25.16■■□□□ 1.62
GMDS-204ENST00000476972 WDR43Q15061 677 aaKnown RBP eCLIP25.16■■□□□ 1.62
GMDS-204ENST00000476972 TAF7Q15545 349 aaPredicted RBP25.16■■□□□ 1.62
GMDS-204ENST00000476972 THUMPD2Q9BTF0 503 aaKnown RBP25.16■■□□□ 1.62
GMDS-204ENST00000476972 BRIP1Q9BX63 1249 aa25.16■■□□□ 1.62
GMDS-204ENST00000476972 ARFGEF1Q9Y6D6 1849 aa25.15■■□□□ 1.62
GMDS-204ENST00000476972 SCN7AQ01118 1682 aa25.15■■□□□ 1.62
GMDS-204ENST00000476972 LAMB4A4D0S4 1761 aa25.15■■□□□ 1.62
GMDS-204ENST00000476972 ZC3H4Q9UPT8 1303 aaKnown RBP25.14■■□□□ 1.62
GMDS-204ENST00000476972 NFKBIEO00221 500 aa25.14■■□□□ 1.62
GMDS-204ENST00000476972 PRR5LQ6MZQ0 368 aa25.14■■□□□ 1.62
GMDS-204ENST00000476972 NPM2Q86SE8 214 aaKnown RBP25.14■■□□□ 1.62
GMDS-204ENST00000476972 CCDC146Q8IYE0 955 aa25.14■■□□□ 1.62
GMDS-204ENST00000476972 ZNF622Q969S3 477 aaKnown RBP eCLIP25.14■■□□□ 1.62
GMDS-204ENST00000476972 GLTPD2A6NH11 291 aa25.13■■□□□ 1.61
GMDS-204ENST00000476972 PDE6BP35913 854 aa25.13■■□□□ 1.61
GMDS-204ENST00000476972 MIS18AQ9NYP9 233 aa25.13■■□□□ 1.61
GMDS-204ENST00000476972 PRAMEF22A3QJZ6 481 aa25.12■■□□□ 1.61
GMDS-204ENST00000476972 CAMTA2O94983 1202 aa25.12■■□□□ 1.61
GMDS-204ENST00000476972 SETDB2Q96T68 719 aa25.12■■□□□ 1.61
GMDS-204ENST00000476972 USP16Q9Y5T5 823 aa25.12■■□□□ 1.61
GMDS-204ENST00000476972 SNRPA1P09661 255 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms