RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 DAB2P98082 770 aa9.52□□□□□ -0.89
LRCH3-215ENST00000476664 ATP2B2Q01814 1243 aa9.52□□□□□ -0.89
LRCH3-215ENST00000476664 PLCB3Q01970 1234 aa9.52□□□□□ -0.89
LRCH3-215ENST00000476664 ARID5AQ03989 594 aa9.52□□□□□ -0.89
LRCH3-215ENST00000476664 OXLD1Q5BKU9 147 aa9.52□□□□□ -0.89
LRCH3-215ENST00000476664 DMRTB1Q96MA1 342 aa9.52□□□□□ -0.89
LRCH3-215ENST00000476664 DUSP9Q99956 384 aaKnown RBP9.52□□□□□ -0.89
LRCH3-215ENST00000476664 ACBD3Q9H3P7 528 aa9.52□□□□□ -0.89
LRCH3-215ENST00000476664 ZSWIM4Q9H7M6 989 aa9.52□□□□□ -0.89
LRCH3-215ENST00000476664 KIAA1468Q9P260 1216 aa9.52□□□□□ -0.89
LRCH3-215ENST00000476664 MAP10Q9P2G4 905 aa9.52□□□□□ -0.89
LRCH3-215ENST00000476664 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.52□□□□□ -0.89
LRCH3-215ENST00000476664 TRAPPC8Q9Y2L5 1435 aa9.52□□□□□ -0.89
LRCH3-215ENST00000476664 CPS1P31327 1500 aa9.51□□□□□ -0.89
LRCH3-215ENST00000476664 MAPK8P45983 427 aa9.51□□□□□ -0.89
LRCH3-215ENST00000476664 PTPROQ16827 1216 aa9.51□□□□□ -0.89
LRCH3-215ENST00000476664 PTPRNQ16849 979 aa9.51□□□□□ -0.89
LRCH3-215ENST00000476664 MORN1Q5T089 497 aa9.51□□□□□ -0.89
LRCH3-215ENST00000476664 NBPF14Q5TI25 921 aa9.51□□□□□ -0.89
LRCH3-215ENST00000476664 CC2D2BQ6DHV5 1058 aa9.51□□□□□ -0.89
LRCH3-215ENST00000476664 KHSRPQ92945 711 aaKnown RBP eCLIP9.51□□□□□ -0.891e-6■■□□□ 13.4
LRCH3-215ENST00000476664 FAM161BQ96MY7 647 aa9.51□□□□□ -0.89
LRCH3-215ENST00000476664 LHX6Q9UPM6 363 aa9.51□□□□□ -0.89
LRCH3-215ENST00000476664 IGF1RP08069 1367 aa9.5□□□□□ -0.89
LRCH3-215ENST00000476664 ABCA8O94911 1581 aa9.5□□□□□ -0.89
LRCH3-215ENST00000476664 CTHP32929 405 aa9.5□□□□□ -0.89
LRCH3-215ENST00000476664 FKBP5Q13451 457 aaPredicted RBP9.5□□□□□ -0.89
LRCH3-215ENST00000476664 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
LRCH3-215ENST00000476664 KCNB2Q92953 911 aa9.5□□□□□ -0.89
LRCH3-215ENST00000476664 SPACA7Q96KW9 195 aa9.5□□□□□ -0.89
LRCH3-215ENST00000476664 PSMD1Q99460 953 aa9.5□□□□□ -0.89
LRCH3-215ENST00000476664 USB1Q9BQ65 265 aaKnown RBP9.5□□□□□ -0.89
LRCH3-215ENST00000476664 PRKD2Q9BZL6 878 aa9.5□□□□□ -0.89
LRCH3-215ENST00000476664 MAGI2Q86UL8 1455 aa9.5□□□□□ -0.89
LRCH3-215ENST00000476664 PLEKHD1A6NEE1 506 aa9.49□□□□□ -0.89
LRCH3-215ENST00000476664 M0R2N6 131 aa9.49□□□□□ -0.89
LRCH3-215ENST00000476664 CCDC181Q5TID7 509 aa9.49□□□□□ -0.89
LRCH3-215ENST00000476664 PIF1Q9H611 641 aa9.49□□□□□ -0.89
LRCH3-215ENST00000476664 SLC27A5Q9Y2P5 690 aa9.49□□□□□ -0.89
LRCH3-215ENST00000476664 UGGT2Q9NYU1 1516 aa9.49□□□□□ -0.89
LRCH3-215ENST00000476664 HECW1Q76N89 1606 aa9.49□□□□□ -0.89
LRCH3-215ENST00000476664 SUPT6HQ7KZ85 1726 aaKnown RBP9.48□□□□□ -0.89
LRCH3-215ENST00000476664 EHHADHQ08426 723 aa9.48□□□□□ -0.89
LRCH3-215ENST00000476664 DSC3Q14574 896 aa9.48□□□□□ -0.89
LRCH3-215ENST00000476664 TSGA10IPQ3SY00 556 aa9.48□□□□□ -0.89
LRCH3-215ENST00000476664 FAM9AQ8IZU1 332 aaPredicted RBP9.48□□□□□ -0.89
LRCH3-215ENST00000476664 BRINP2Q9C0B6 783 aa9.48□□□□□ -0.89
LRCH3-215ENST00000476664 OSBPL2Q9H1P3 480 aa9.48□□□□□ -0.89
LRCH3-215ENST00000476664 INPP5FQ9Y2H2 1132 aa9.48□□□□□ -0.89
LRCH3-215ENST00000476664 PPME1Q9Y570 386 aa9.48□□□□□ -0.89
LRCH3-215ENST00000476664 ATP10AO60312 1499 aa9.47□□□□□ -0.89
LRCH3-215ENST00000476664 TCOF1Q13428 1488 aaKnown RBP9.47□□□□□ -0.89
LRCH3-215ENST00000476664 ANAPC15P60006 121 aa9.47□□□□□ -0.89
LRCH3-215ENST00000476664 PDE3BQ13370 1112 aa9.47□□□□□ -0.89
LRCH3-215ENST00000476664 RNF20Q5VTR2 975 aa9.47□□□□□ -0.89
LRCH3-215ENST00000476664 VPS37DQ86XT2 251 aa9.47□□□□□ -0.89
LRCH3-215ENST00000476664 ADAM32Q8TC27 787 aa9.47□□□□□ -0.89
LRCH3-215ENST00000476664 TRIM52Q96A61 297 aa9.47□□□□□ -0.89
LRCH3-215ENST00000476664 GPATCH3Q96I76 525 aa9.47□□□□□ -0.89
LRCH3-215ENST00000476664 CCDC85AQ96PX6 553 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-215ENST00000476664 ARHGAP9Q9BRR9 750 aa9.47□□□□□ -0.89
LRCH3-215ENST00000476664 C9orf84Q5VXU9 1444 aa9.47□□□□□ -0.89
LRCH3-215ENST00000476664 SETBP1Q9Y6X0 1596 aa9.46□□□□□ -0.89
LRCH3-215ENST00000476664 TNNI2P48788 182 aa9.46□□□□□ -0.9
LRCH3-215ENST00000476664 NAA30Q147X3 362 aaPredicted RBP9.46□□□□□ -0.9
LRCH3-215ENST00000476664 RNF187Q5TA31 235 aaPredicted RBP9.46□□□□□ -0.9
LRCH3-215ENST00000476664 ZNF746Q6NUN9 644 aaPredicted RBP9.46□□□□□ -0.9
LRCH3-215ENST00000476664 CAPN12Q6ZSI9 719 aa9.46□□□□□ -0.9
LRCH3-215ENST00000476664 DZIP3Q86Y13 1208 aaKnown RBP9.46□□□□□ -0.9
LRCH3-215ENST00000476664 NLGN1Q8N2Q7 840 aa9.46□□□□□ -0.9
LRCH3-215ENST00000476664 OCSTAMPQ9BR26 566 aa9.46□□□□□ -0.9
LRCH3-215ENST00000476664 PCDHGA11Q9Y5H2 935 aa9.46□□□□□ -0.9
LRCH3-215ENST00000476664 PLA2R1Q13018 1463 aa9.46□□□□□ -0.9
LRCH3-215ENST00000476664 SHANK2Q9UPX8 1470 aa9.46□□□□□ -0.9
LRCH3-215ENST00000476664 POTEFA5A3E0 1075 aa9.45□□□□□ -0.9
LRCH3-215ENST00000476664 FOXO3O43524 673 aa9.45□□□□□ -0.9
LRCH3-215ENST00000476664 STK10O94804 968 aaKnown RBP9.45□□□□□ -0.9
LRCH3-215ENST00000476664 JUNDP17535 347 aa9.45□□□□□ -0.9
LRCH3-215ENST00000476664 HSD3B2P26439 372 aa9.45□□□□□ -0.9
LRCH3-215ENST00000476664 USP4Q13107 963 aa9.45□□□□□ -0.9
LRCH3-215ENST00000476664 ALKBH2Q6NS38 261 aa9.45□□□□□ -0.9
LRCH3-215ENST00000476664 PPP1R18Q6NYC8 613 aa9.45□□□□□ -0.9
LRCH3-215ENST00000476664 ZBTB33Q86T24 672 aa9.45□□□□□ -0.9
LRCH3-215ENST00000476664 ZNF654Q8IZM8 581 aa9.45□□□□□ -0.9
LRCH3-215ENST00000476664 SALL2Q9Y467 1007 aaPredicted RBP9.45□□□□□ -0.9
LRCH3-215ENST00000476664 RAPGEF2Q9Y4G8 1499 aa9.45□□□□□ -0.9
LRCH3-215ENST00000476664 LGR5O75473 907 aa9.44□□□□□ -0.9
LRCH3-215ENST00000476664 MPSTP25325 297 aa9.44□□□□□ -0.9
LRCH3-215ENST00000476664 NFE2L2Q16236 605 aa9.44□□□□□ -0.9
LRCH3-215ENST00000476664 ALG1LQ6GMV1 187 aa9.44□□□□□ -0.9
LRCH3-215ENST00000476664 GPR153Q6NV75 609 aa9.44□□□□□ -0.9
LRCH3-215ENST00000476664 CYLDQ9NQC7 956 aa9.44□□□□□ -0.9
LRCH3-215ENST00000476664 NOP58Q9Y2X3 529 aaKnown RBP9.44□□□□□ -0.9
LRCH3-215ENST00000476664 IGFBP4P22692 258 aa9.43□□□□□ -0.9
LRCH3-215ENST00000476664 TSEN2Q8NCE0 465 aaKnown RBP9.43□□□□□ -0.9
LRCH3-215ENST00000476664 ALKBH8Q96BT7 664 aaKnown RBP9.43□□□□□ -0.9
LRCH3-215ENST00000476664 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.43□□□□□ -0.9
LRCH3-215ENST00000476664 CFAP74Q9C0B2 1584 aa9.42□□□□□ -0.9
LRCH3-215ENST00000476664 ATP10BO94823 1461 aa9.42□□□□□ -0.9
LRCH3-215ENST00000476664 ACTN4O43707 911 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms