RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 UTRNP46939 3433 aa18.93■□□□□ 0.62
ABCF3-211ENST00000475728 KCNQ3O43525 872 aa18.93■□□□□ 0.62
ABCF3-211ENST00000475728 AMIGO3Q86WK7 504 aa18.93■□□□□ 0.62
ABCF3-211ENST00000475728 ARXQ96QS3 562 aa18.93■□□□□ 0.62
ABCF3-211ENST00000475728 THUMPD2Q9BTF0 503 aaKnown RBP18.93■□□□□ 0.62
ABCF3-211ENST00000475728 DLG5Q8TDM6 1919 aa18.93■□□□□ 0.62
ABCF3-211ENST00000475728 APAF1O14727 1248 aa18.91■□□□□ 0.62
ABCF3-211ENST00000475728 CALD1Q05682 793 aaKnown RBP18.91■□□□□ 0.62
ABCF3-211ENST00000475728 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
ABCF3-211ENST00000475728 ARHGEF1Q92888 912 aaKnown RBP18.91■□□□□ 0.62
ABCF3-211ENST00000475728 TSPYL4Q9UJ04 414 aa18.91■□□□□ 0.62
ABCF3-211ENST00000475728 CHD4Q14839 1912 aa18.9■□□□□ 0.62
ABCF3-211ENST00000475728 A0A087WZG4 1122 aa18.9■□□□□ 0.62
ABCF3-211ENST00000475728 MSL1Q68DK7 614 aa18.9■□□□□ 0.62
ABCF3-211ENST00000475728 NLGN1Q8N2Q7 840 aa18.9■□□□□ 0.62
ABCF3-211ENST00000475728 MIS18AQ9NYP9 233 aa18.9■□□□□ 0.62
ABCF3-211ENST00000475728 TRIM35Q9UPQ4 493 aa18.9■□□□□ 0.62
ABCF3-211ENST00000475728 SOS1Q07889 1333 aaPredicted RBP18.9■□□□□ 0.62
ABCF3-211ENST00000475728 SMIM5Q71RC9 77 aa18.89■□□□□ 0.61
ABCF3-211ENST00000475728 ZBTB1Q9Y2K1 713 aa18.89■□□□□ 0.61
ABCF3-211ENST00000475728 ZPR1O75312 459 aa18.88■□□□□ 0.61
ABCF3-211ENST00000475728 CANXP27824 592 aaKnown RBP18.88■□□□□ 0.61
ABCF3-211ENST00000475728 COL15A1P39059 1388 aa18.87■□□□□ 0.61
ABCF3-211ENST00000475728 IL6STP40189 918 aaPredicted RBP18.87■□□□□ 0.61
ABCF3-211ENST00000475728 EIF4A1P60842 406 aaKnown RBP18.87■□□□□ 0.61
ABCF3-211ENST00000475728 COL24A1Q17RW2 1714 aa18.87■□□□□ 0.61
ABCF3-211ENST00000475728 FHDC1Q9C0D6 1143 aaPredicted RBP18.87■□□□□ 0.61
ABCF3-211ENST00000475728 USP42Q9H9J4 1324 aaKnown RBP18.87■□□□□ 0.61
ABCF3-211ENST00000475728 MYH14Q7Z406 1995 aaKnown RBP18.86■□□□□ 0.61
ABCF3-211ENST00000475728 NCBP3Q53F19 620 aaKnown RBP18.86■□□□□ 0.61
ABCF3-211ENST00000475728 USP16Q9Y5T5 823 aa18.86■□□□□ 0.61
ABCF3-211ENST00000475728 CHL1O00533 1208 aa18.85■□□□□ 0.61
ABCF3-211ENST00000475728 GIGYF1O75420 1035 aaPredicted RBP18.85■□□□□ 0.61
ABCF3-211ENST00000475728 GYS1P13807 737 aa18.85■□□□□ 0.61
ABCF3-211ENST00000475728 EIF5P55010 431 aaKnown RBP18.85■□□□□ 0.61
ABCF3-211ENST00000475728 SYT17Q9BSW7 474 aa18.85■□□□□ 0.61
ABCF3-211ENST00000475728 NARFQ9UHQ1 456 aa18.85■□□□□ 0.61
ABCF3-211ENST00000475728 KDM3BQ7LBC6 1761 aa18.84■□□□□ 0.61
ABCF3-211ENST00000475728 A1BGP04217 495 aa18.84■□□□□ 0.61
ABCF3-211ENST00000475728 CCDC27Q2M243 656 aa18.84■□□□□ 0.61
ABCF3-211ENST00000475728 CFAP44Q96MT7 982 aa18.84■□□□□ 0.61
ABCF3-211ENST00000475728 LAS1LQ9Y4W2 734 aaKnown RBP18.84■□□□□ 0.61
ABCF3-211ENST00000475728 GNAI1P63096 354 aa18.83■□□□□ 0.6
ABCF3-211ENST00000475728 FAM9BQ8IZU0 186 aa18.83■□□□□ 0.6
ABCF3-211ENST00000475728 NGEFQ8N5V2 710 aa18.83■□□□□ 0.6
ABCF3-211ENST00000475728 CCER2I3L3R5 266 aa18.82■□□□□ 0.6
ABCF3-211ENST00000475728 MMP10P09238 476 aa18.82■□□□□ 0.6
ABCF3-211ENST00000475728 KLHL34Q8N239 644 aa18.82■□□□□ 0.6
ABCF3-211ENST00000475728 IFT57Q9NWB7 429 aa18.82■□□□□ 0.6
ABCF3-211ENST00000475728 SRP68Q9UHB9 627 aaKnown RBP18.82■□□□□ 0.6
ABCF3-211ENST00000475728 ZNF330Q9Y3S2 320 aaPredicted RBP18.82■□□□□ 0.6
ABCF3-211ENST00000475728 ERBB4Q15303 1308 aa18.81■□□□□ 0.6
ABCF3-211ENST00000475728 PRAMEF22A3QJZ6 481 aa18.81■□□□□ 0.6
ABCF3-211ENST00000475728 USPL1Q5W0Q7 1092 aa18.81■□□□□ 0.6
ABCF3-211ENST00000475728 CD2APQ9Y5K6 639 aa18.81■□□□□ 0.6
ABCF3-211ENST00000475728 PARP3Q9Y6F1 533 aa18.81■□□□□ 0.6
ABCF3-211ENST00000475728 C4AP0C0L4 1744 aa18.8■□□□□ 0.6
ABCF3-211ENST00000475728 FKBP8Q14318 412 aa18.79■□□□□ 0.6
ABCF3-211ENST00000475728 DIEXFQ68CQ4 756 aaKnown RBP18.79■□□□□ 0.6
ABCF3-211ENST00000475728 CEP350Q5VT06 3117 aa18.79■□□□□ 0.6
ABCF3-211ENST00000475728 HOXB7P09629 217 aa18.78■□□□□ 0.6
ABCF3-211ENST00000475728 ZNF853P0CG23 659 aa18.78■□□□□ 0.6
ABCF3-211ENST00000475728 DZIP3Q86Y13 1208 aaKnown RBP18.78■□□□□ 0.6
ABCF3-211ENST00000475728 RGL2O15211 777 aa18.77■□□□□ 0.6
ABCF3-211ENST00000475728 WWC1Q8IX03 1113 aa18.77■□□□□ 0.6
ABCF3-211ENST00000475728 CHMP4AQ9BY43 222 aa18.77■□□□□ 0.6
ABCF3-211ENST00000475728 MBIPQ9NS73 344 aa18.77■□□□□ 0.6
ABCF3-211ENST00000475728 LAMB4A4D0S4 1761 aa18.77■□□□□ 0.6
ABCF3-211ENST00000475728 IL16Q14005 1332 aa18.76■□□□□ 0.59
ABCF3-211ENST00000475728 NBPF26B4DH59 902 aa18.76■□□□□ 0.59
ABCF3-211ENST00000475728 TM4SF1P30408 202 aa18.76■□□□□ 0.59
ABCF3-211ENST00000475728 NBPF10Q6P3W6 841 aaKnown RBP18.76■□□□□ 0.59
ABCF3-211ENST00000475728 NBPF15Q8N660 670 aa18.76■□□□□ 0.59
ABCF3-211ENST00000475728 TBC1D2BQ9UPU7 963 aa18.76■□□□□ 0.59
ABCF3-211ENST00000475728 ZNF652Q9Y2D9 606 aa18.76■□□□□ 0.59
ABCF3-211ENST00000475728 CLEC4GQ6UXB4 293 aa18.75■□□□□ 0.59
ABCF3-211ENST00000475728 CAMTA2O94983 1202 aa18.74■□□□□ 0.59
ABCF3-211ENST00000475728 EIF2S2P20042 333 aaKnown RBP18.74■□□□□ 0.59
ABCF3-211ENST00000475728 PIP4K2AP48426 406 aaPredicted RBP18.74■□□□□ 0.59
ABCF3-211ENST00000475728 WDR63Q8IWG1 891 aa18.74■□□□□ 0.59
ABCF3-211ENST00000475728 BCL2L12Q9HB09 334 aa18.74■□□□□ 0.59
ABCF3-211ENST00000475728 NFIXQ14938 502 aa18.73■□□□□ 0.59
ABCF3-211ENST00000475728 KIF6Q6ZMV9 814 aa18.73■□□□□ 0.59
ABCF3-211ENST00000475728 POLRMTO00411 1230 aaKnown RBP18.72■□□□□ 0.59
ABCF3-211ENST00000475728 MYL6BP14649 208 aa18.72■□□□□ 0.59
ABCF3-211ENST00000475728 DDR1Q08345 913 aa18.72■□□□□ 0.59
ABCF3-211ENST00000475728 DUSP27Q5VZP5 1158 aa18.72■□□□□ 0.59
ABCF3-211ENST00000475728 TGFB2P61812 414 aa18.71■□□□□ 0.59
ABCF3-211ENST00000475728 GPR162Q16538 588 aa18.71■□□□□ 0.59
ABCF3-211ENST00000475728 HDGFL1Q5TGJ6 251 aa18.71■□□□□ 0.59
ABCF3-211ENST00000475728 SETDB2Q96T68 719 aa18.71■□□□□ 0.59
ABCF3-211ENST00000475728 C10orf71Q711Q0 1435 aa18.71■□□□□ 0.59
ABCF3-211ENST00000475728 SCN7AQ01118 1682 aa18.7■□□□□ 0.58
ABCF3-211ENST00000475728 ERVV-1B6SEH8 477 aa18.7■□□□□ 0.58
ABCF3-211ENST00000475728 NLGN2Q8NFZ4 835 aa18.7■□□□□ 0.58
ABCF3-211ENST00000475728 DDX21Q9NR30 783 aaKnown RBP eCLIP18.7■□□□□ 0.58
ABCF3-211ENST00000475728 SALL2Q9Y467 1007 aaPredicted RBP18.7■□□□□ 0.58
ABCF3-211ENST00000475728 CARMIL3Q8ND23 1372 aa18.69■□□□□ 0.58
ABCF3-211ENST00000475728 SERPINB2P05120 415 aa18.69■□□□□ 0.58
ABCF3-211ENST00000475728 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms