RNA–Protein interactions for RNA: ENST00000475141.2

FRMD4A-204, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-204ENST00000475141 CCNL1Q9UK58 526 aaPredicted RBP18.31■□□□□ 0.52
FRMD4A-204ENST00000475141 CLEC11AQ9Y240 323 aa18.31■□□□□ 0.52
FRMD4A-204ENST00000475141 SIPA1L3O60292 1781 aaPredicted RBP18.31■□□□□ 0.52
FRMD4A-204ENST00000475141 LY75O60449 1722 aa18.3■□□□□ 0.52
FRMD4A-204ENST00000475141 C1QTNF8P60827 252 aa18.29■□□□□ 0.52
FRMD4A-204ENST00000475141 SPDYE1Q8NFV5 336 aaPredicted RBP18.29■□□□□ 0.52
FRMD4A-204ENST00000475141 TAF7Q15545 349 aaPredicted RBP18.28■□□□□ 0.52
FRMD4A-204ENST00000475141 PIGBQ92521 554 aa18.28■□□□□ 0.52
FRMD4A-204ENST00000475141 BTBD11A6QL63 1104 aa18.27■□□□□ 0.52
FRMD4A-204ENST00000475141 MSL1Q68DK7 614 aa18.27■□□□□ 0.52
FRMD4A-204ENST00000475141 COL23A1Q86Y22 540 aaPredicted RBP18.27■□□□□ 0.52
FRMD4A-204ENST00000475141 WDR63Q8IWG1 891 aa18.27■□□□□ 0.52
FRMD4A-204ENST00000475141 TTC5Q8N0Z6 440 aa18.27■□□□□ 0.52
FRMD4A-204ENST00000475141 LAS1LQ9Y4W2 734 aaKnown RBP18.27■□□□□ 0.52
FRMD4A-204ENST00000475141 GOLGB1Q14789 3259 aaKnown RBP18.27■□□□□ 0.51
FRMD4A-204ENST00000475141 COL24A1Q17RW2 1714 aa18.26■□□□□ 0.51
FRMD4A-204ENST00000475141 SMARCC1Q92922 1105 aaPredicted RBP18.26■□□□□ 0.51
FRMD4A-204ENST00000475141 IL16Q14005 1332 aa18.25■□□□□ 0.51
FRMD4A-204ENST00000475141 GNAI1P63096 354 aa18.25■□□□□ 0.51
FRMD4A-204ENST00000475141 IFT57Q9NWB7 429 aa18.25■□□□□ 0.51
FRMD4A-204ENST00000475141 BABAM1Q9NWV8 329 aa18.25■□□□□ 0.51
FRMD4A-204ENST00000475141 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
FRMD4A-204ENST00000475141 ZBED9Q6R2W3 1325 aa18.24■□□□□ 0.51
FRMD4A-204ENST00000475141 CFAP44Q96MT7 982 aa18.24■□□□□ 0.51
FRMD4A-204ENST00000475141 YTHDC1Q96MU7 727 aaKnown RBP18.24■□□□□ 0.51
FRMD4A-204ENST00000475141 PALLDQ8WX93 1383 aa18.24■□□□□ 0.51
FRMD4A-204ENST00000475141 KDM3BQ7LBC6 1761 aa18.24■□□□□ 0.51
FRMD4A-204ENST00000475141 ZNF521Q96K83 1311 aa18.23■□□□□ 0.51
FRMD4A-204ENST00000475141 YBX3P16989 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
FRMD4A-204ENST00000475141 GOLGA2Q08379 1002 aa18.23■□□□□ 0.51
FRMD4A-204ENST00000475141 ASAP1Q9ULH1 1129 aa18.23■□□□□ 0.51
FRMD4A-204ENST00000475141 SLC39A6Q13433 755 aa18.22■□□□□ 0.51
FRMD4A-204ENST00000475141 ZNF790Q6PG37 636 aa18.22■□□□□ 0.51
FRMD4A-204ENST00000475141 ATG3Q9NT62 314 aa18.22■□□□□ 0.51
FRMD4A-204ENST00000475141 MYH16Q9H6N6 1097 aa18.21■□□□□ 0.51
FRMD4A-204ENST00000475141 MIS18AQ9NYP9 233 aa18.21■□□□□ 0.51
FRMD4A-204ENST00000475141 UBR2Q8IWV8 1755 aa18.21■□□□□ 0.51
FRMD4A-204ENST00000475141 CHL1O00533 1208 aa18.2■□□□□ 0.5
FRMD4A-204ENST00000475141 GIGYF1O75420 1035 aaPredicted RBP18.2■□□□□ 0.5
FRMD4A-204ENST00000475141 PIP4P2Q8N4L2 257 aa18.2■□□□□ 0.5
FRMD4A-204ENST00000475141 E9PSI1 815 aa18.19■□□□□ 0.5
FRMD4A-204ENST00000475141 PTCD1O75127 700 aaKnown RBP18.19■□□□□ 0.5
FRMD4A-204ENST00000475141 ZNF853P0CG23 659 aa18.19■□□□□ 0.5
FRMD4A-204ENST00000475141 SMIM5Q71RC9 77 aa18.19■□□□□ 0.5
FRMD4A-204ENST00000475141 FMNL2Q96PY5 1086 aa18.19■□□□□ 0.5
FRMD4A-204ENST00000475141 MBIPQ9NS73 344 aa18.19■□□□□ 0.5
FRMD4A-204ENST00000475141 C5P01031 1676 aa18.18■□□□□ 0.5
FRMD4A-204ENST00000475141 KCPQ6ZWJ8 1503 aa18.18■□□□□ 0.5
FRMD4A-204ENST00000475141 LOC102724428A0A0B4J2F2 783 aa18.17■□□□□ 0.5
FRMD4A-204ENST00000475141 GRIN3BO60391 1043 aa18.17■□□□□ 0.5
FRMD4A-204ENST00000475141 SIK1P57059 783 aa18.17■□□□□ 0.5
FRMD4A-204ENST00000475141 FANCIQ9NVI1 1328 aa18.17■□□□□ 0.5
FRMD4A-204ENST00000475141 TAF1LQ8IZX4 1826 aa18.16■□□□□ 0.5
FRMD4A-204ENST00000475141 KCNQ3O43525 872 aa18.16■□□□□ 0.5
FRMD4A-204ENST00000475141 HMGB2P26583 209 aaKnown RBP18.16■□□□□ 0.5
FRMD4A-204ENST00000475141 TSR2Q969E8 191 aaKnown RBP18.16■□□□□ 0.5
FRMD4A-204ENST00000475141 ZNF496Q96IT1 587 aaPredicted RBP18.16■□□□□ 0.5
FRMD4A-204ENST00000475141 HEG1Q9ULI3 1381 aa18.16■□□□□ 0.5
FRMD4A-204ENST00000475141 ZNF831Q5JPB2 1677 aa18.15■□□□□ 0.5
FRMD4A-204ENST00000475141 EIF4A1P60842 406 aaKnown RBP18.15■□□□□ 0.5
FRMD4A-204ENST00000475141 WWC3Q9ULE0 1092 aa18.15■□□□□ 0.5
FRMD4A-204ENST00000475141 PHF14O94880 888 aa18.14■□□□□ 0.49
FRMD4A-204ENST00000475141 ATP6V1AP38606 617 aa18.14■□□□□ 0.49
FRMD4A-204ENST00000475141 SLFN5Q08AF3 891 aa18.14■□□□□ 0.49
FRMD4A-204ENST00000475141 AMIGO3Q86WK7 504 aa18.14■□□□□ 0.49
FRMD4A-204ENST00000475141 VSIG10Q8N0Z9 540 aa18.14■□□□□ 0.49
FRMD4A-204ENST00000475141 CICQ96RK0 1608 aaPredicted RBP18.13■□□□□ 0.49
FRMD4A-204ENST00000475141 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
FRMD4A-204ENST00000475141 CDCA7LQ96GN5 454 aa18.13■□□□□ 0.49
FRMD4A-204ENST00000475141 AK7Q96M32 723 aa18.13■□□□□ 0.49
FRMD4A-204ENST00000475141 LAMB4A4D0S4 1761 aa18.12■□□□□ 0.49
FRMD4A-204ENST00000475141 FXR2P51116 673 aaKnown RBP eCLIP18.12■□□□□ 0.49
FRMD4A-204ENST00000475141 FLAD1Q8NFF5 587 aa18.12■□□□□ 0.49
FRMD4A-204ENST00000475141 TEX13AQ9BXU3 409 aaPredicted RBP18.12■□□□□ 0.49
FRMD4A-204ENST00000475141 CD2APQ9Y5K6 639 aa18.12■□□□□ 0.49
FRMD4A-204ENST00000475141 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
FRMD4A-204ENST00000475141 TJP1Q07157 1748 aa18.12■□□□□ 0.49
FRMD4A-204ENST00000475141 SOS1Q07889 1333 aaPredicted RBP18.1■□□□□ 0.49
FRMD4A-204ENST00000475141 STARD3NLO95772 234 aa18.1■□□□□ 0.49
FRMD4A-204ENST00000475141 HOXB7P09629 217 aa18.1■□□□□ 0.49
FRMD4A-204ENST00000475141 ZNF526Q8TF50 670 aaPredicted RBP18.1■□□□□ 0.49
FRMD4A-204ENST00000475141 COL5A3P25940 1745 aaPredicted RBP18.09■□□□□ 0.49
FRMD4A-204ENST00000475141 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.09■□□□□ 0.49
FRMD4A-204ENST00000475141 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
FRMD4A-204ENST00000475141 DUSP27Q5VZP5 1158 aa18.09■□□□□ 0.49
FRMD4A-204ENST00000475141 DNAJC10Q8IXB1 793 aa18.09■□□□□ 0.49
FRMD4A-204ENST00000475141 SLC4A9Q96Q91 983 aa18.09■□□□□ 0.49
FRMD4A-204ENST00000475141 CHMP4AQ9BY43 222 aa18.09■□□□□ 0.49
FRMD4A-204ENST00000475141 ATP10DQ9P241 1426 aa18.08■□□□□ 0.49
FRMD4A-204ENST00000475141 UBR3Q6ZT12 1888 aa18.08■□□□□ 0.49
FRMD4A-204ENST00000475141 EXOSC9Q06265 439 aaKnown RBP18.08■□□□□ 0.48
FRMD4A-204ENST00000475141 ITPK1Q13572 414 aa18.08■□□□□ 0.48
FRMD4A-204ENST00000475141 KRT24Q2M2I5 525 aa18.08■□□□□ 0.48
FRMD4A-204ENST00000475141 ELL2O00472 640 aaPredicted RBP18.07■□□□□ 0.48
FRMD4A-204ENST00000475141 TWISTNBQ3B726 338 aaPredicted RBP18.07■□□□□ 0.48
FRMD4A-204ENST00000475141 TRMT2AQ8IZ69 625 aaKnown RBP18.07■□□□□ 0.48
FRMD4A-204ENST00000475141 C8orf58Q8NAV2 365 aa18.07■□□□□ 0.48
FRMD4A-204ENST00000475141 LINC00116Q8NCU8 138 aa18.07■□□□□ 0.48
FRMD4A-204ENST00000475141 HDGFL1Q5TGJ6 251 aa18.06■□□□□ 0.48
FRMD4A-204ENST00000475141 PRAMEF22A3QJZ6 481 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms