RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 CHD4Q14839 1912 aa27.07■■□□□ 1.92
SNX13-206ENST00000474067 COL15A1P39059 1388 aa27.07■■□□□ 1.92
SNX13-206ENST00000474067 TGFB2P61812 414 aa27.06■■□□□ 1.92
SNX13-206ENST00000474067 MCM10Q7L590 875 aa27.05■■□□□ 1.92
SNX13-206ENST00000474067 LMOD3Q0VAK6 560 aa27.04■■□□□ 1.92
SNX13-206ENST00000474067 TAF7Q15545 349 aaPredicted RBP27.04■■□□□ 1.92
SNX13-206ENST00000474067 NFE2L2Q16236 605 aa27.04■■□□□ 1.92
SNX13-206ENST00000474067 NARFQ9UHQ1 456 aa27.04■■□□□ 1.92
SNX13-206ENST00000474067 ZBTB1Q9Y2K1 713 aa27.04■■□□□ 1.92
SNX13-206ENST00000474067 WDR43Q15061 677 aaKnown RBP eCLIP27.03■■□□□ 1.92
SNX13-206ENST00000474067 PLEKHF1Q96S99 279 aa27.03■■□□□ 1.92
SNX13-206ENST00000474067 CANXP27824 592 aaKnown RBP27.02■■□□□ 1.92
SNX13-206ENST00000474067 SNRPA1P09661 255 aaKnown RBP27.01■■□□□ 1.91
SNX13-206ENST00000474067 IL6STP40189 918 aaPredicted RBP27.01■■□□□ 1.91
SNX13-206ENST00000474067 USPL1Q5W0Q7 1092 aa27■■□□□ 1.91
SNX13-206ENST00000474067 C10orf71Q711Q0 1435 aa26.99■■□□□ 1.91
SNX13-206ENST00000474067 SRP68Q9UHB9 627 aaKnown RBP26.99■■□□□ 1.91
SNX13-206ENST00000474067 KIF13BQ9NQT8 1826 aa26.99■■□□□ 1.91
SNX13-206ENST00000474067 EIF5P55010 431 aaKnown RBP26.97■■□□□ 1.91
SNX13-206ENST00000474067 FKBP8Q14318 412 aa26.97■■□□□ 1.91
SNX13-206ENST00000474067 DCTN1Q14203 1278 aa26.96■■□□□ 1.91
SNX13-206ENST00000474067 PRKRIP1Q9H875 184 aaPredicted RBP26.96■■□□□ 1.91
SNX13-206ENST00000474067 DLG5Q8TDM6 1919 aa26.95■■□□□ 1.9
SNX13-206ENST00000474067 ZNF330Q9Y3S2 320 aaPredicted RBP26.95■■□□□ 1.9
SNX13-206ENST00000474067 YBX3P16989 372 aaKnown RBP eCLIP26.94■■□□□ 1.9
SNX13-206ENST00000474067 TM4SF1P30408 202 aa26.93■■□□□ 1.9
SNX13-206ENST00000474067 BABAM1Q9NWV8 329 aa26.93■■□□□ 1.9
SNX13-206ENST00000474067 POLRMTO00411 1230 aaKnown RBP26.92■■□□□ 1.9
SNX13-206ENST00000474067 RIPK4P57078 832 aa26.92■■□□□ 1.9
SNX13-206ENST00000474067 PXDNLA1KZ92 1463 aa26.92■■□□□ 1.9
SNX13-206ENST00000474067 RUNDC1Q96C34 613 aa26.91■■□□□ 1.9
SNX13-206ENST00000474067 ZNF652Q9Y2D9 606 aa26.91■■□□□ 1.9
SNX13-206ENST00000474067 KCNQ3O43525 872 aa26.9■■□□□ 1.9
SNX13-206ENST00000474067 RGL2O15211 777 aa26.89■■□□□ 1.9
SNX13-206ENST00000474067 DDR1Q08345 913 aa26.89■■□□□ 1.9
SNX13-206ENST00000474067 NFIXQ14938 502 aa26.89■■□□□ 1.9
SNX13-206ENST00000474067 PDZRN3Q9UPQ7 1066 aa26.89■■□□□ 1.9
SNX13-206ENST00000474067 A1BGP04217 495 aa26.88■■□□□ 1.89
SNX13-206ENST00000474067 TMPOP42166 694 aaKnown RBP26.88■■□□□ 1.89
SNX13-206ENST00000474067 PIM2Q9P1W9 311 aa26.88■■□□□ 1.89
SNX13-206ENST00000474067 USP16Q9Y5T5 823 aa26.88■■□□□ 1.89
SNX13-206ENST00000474067 DZIP3Q86Y13 1208 aaKnown RBP26.87■■□□□ 1.89
SNX13-206ENST00000474067 SCN7AQ01118 1682 aa26.86■■□□□ 1.89
SNX13-206ENST00000474067 A0A0G2JLW4 131 aa26.86■■□□□ 1.89
SNX13-206ENST00000474067 SERPINB2P05120 415 aa26.86■■□□□ 1.89
SNX13-206ENST00000474067 CLEC4GQ6UXB4 293 aa26.86■■□□□ 1.89
SNX13-206ENST00000474067 ZNF784Q8NCA9 323 aaPredicted RBP26.86■■□□□ 1.89
SNX13-206ENST00000474067 BCS1LQ9Y276 419 aa26.86■■□□□ 1.89
SNX13-206ENST00000474067 CARMIL3Q8ND23 1372 aa26.85■■□□□ 1.89
SNX13-206ENST00000474067 LAMB4A4D0S4 1761 aa26.85■■□□□ 1.89
SNX13-206ENST00000474067 KDM3BQ7LBC6 1761 aa26.85■■□□□ 1.89
SNX13-206ENST00000474067 NPHP1O15259 732 aa26.85■■□□□ 1.89
SNX13-206ENST00000474067 TSPYL4Q9UJ04 414 aa26.85■■□□□ 1.89
SNX13-206ENST00000474067 TBC1D2BQ9UPU7 963 aa26.85■■□□□ 1.89
SNX13-206ENST00000474067 ZNF316A6NFI3 1004 aaPredicted RBP26.84■■□□□ 1.89
SNX13-206ENST00000474067 DPEP1P16444 411 aa26.84■■□□□ 1.89
SNX13-206ENST00000474067 SETDB2Q96T68 719 aa26.84■■□□□ 1.89
SNX13-206ENST00000474067 BCL2L12Q9HB09 334 aa26.83■■□□□ 1.89
SNX13-206ENST00000474067 N4BP2Q86UW6 1770 aaPredicted RBP26.83■■□□□ 1.89
SNX13-206ENST00000474067 GIGYF1O75420 1035 aaPredicted RBP26.82■■□□□ 1.88
SNX13-206ENST00000474067 EIF4A1P60842 406 aaKnown RBP26.82■■□□□ 1.88
SNX13-206ENST00000474067 DALRD3Q5D0E6 543 aaKnown RBP26.82■■□□□ 1.88
SNX13-206ENST00000474067 ERBB4Q15303 1308 aa26.82■■□□□ 1.88
SNX13-206ENST00000474067 KIAA1551Q9HCM1 1747 aa26.82■■□□□ 1.88
SNX13-206ENST00000474067 NRXN2Q9P2S2 1712 aa26.82■■□□□ 1.88
SNX13-206ENST00000474067 BICDL1Q6ZP65 573 aa26.81■■□□□ 1.88
SNX13-206ENST00000474067 MIS18AQ9NYP9 233 aa26.81■■□□□ 1.88
SNX13-206ENST00000474067 CAMTA2O94983 1202 aa26.8■■□□□ 1.88
SNX13-206ENST00000474067 THUMPD2Q9BTF0 503 aaKnown RBP26.8■■□□□ 1.88
SNX13-206ENST00000474067 ADAMTS8Q9UP79 889 aa26.8■■□□□ 1.88
SNX13-206ENST00000474067 PDE6BP35913 854 aa26.79■■□□□ 1.88
SNX13-206ENST00000474067 ST5P78524 1137 aa26.79■■□□□ 1.88
SNX13-206ENST00000474067 CALD1Q05682 793 aaKnown RBP26.79■■□□□ 1.88
SNX13-206ENST00000474067 TBC1D9BQ66K14 1250 aa26.79■■□□□ 1.88
SNX13-206ENST00000474067 CCDC146Q8IYE0 955 aa26.79■■□□□ 1.88
SNX13-206ENST00000474067 WWC3Q9ULE0 1092 aa26.79■■□□□ 1.88
SNX13-206ENST00000474067 BCORQ6W2J9 1755 aa26.79■■□□□ 1.88
SNX13-206ENST00000474067 H0YIN7 160 aa26.78■■□□□ 1.88
SNX13-206ENST00000474067 AFDNP55196 1824 aaKnown RBP26.78■■□□□ 1.88
SNX13-206ENST00000474067 PRAMEF22A3QJZ6 481 aa26.77■■□□□ 1.88
SNX13-206ENST00000474067 ANP32CO43423 234 aa26.77■■□□□ 1.88
SNX13-206ENST00000474067 NEUROD2Q15784 382 aa26.77■■□□□ 1.88
SNX13-206ENST00000474067 CNBD1Q8NA66 436 aa26.77■■□□□ 1.88
SNX13-206ENST00000474067 BRCA1P38398 1863 aaKnown RBP26.76■■□□□ 1.88
SNX13-206ENST00000474067 KIF6Q6ZMV9 814 aa26.76■■□□□ 1.87
SNX13-206ENST00000474067 BRIP1Q9BX63 1249 aa26.76■■□□□ 1.87
SNX13-206ENST00000474067 ARFGEF1Q9Y6D6 1849 aa26.75■■□□□ 1.87
SNX13-206ENST00000474067 KCNA3P22001 575 aa26.75■■□□□ 1.87
SNX13-206ENST00000474067 ARHGAP27Q6ZUM4 889 aa26.75■■□□□ 1.87
SNX13-206ENST00000474067 ERVV-1B6SEH8 477 aa26.73■■□□□ 1.87
SNX13-206ENST00000474067 RRP7AQ9Y3A4 280 aaKnown RBP26.73■■□□□ 1.87
SNX13-206ENST00000474067 NBPF26B4DH59 902 aa26.72■■□□□ 1.87
SNX13-206ENST00000474067 CHRNA5P30532 468 aa26.72■■□□□ 1.87
SNX13-206ENST00000474067 PIP4K2AP48426 406 aaPredicted RBP26.72■■□□□ 1.87
SNX13-206ENST00000474067 NBPF10Q6P3W6 841 aaKnown RBP26.72■■□□□ 1.87
SNX13-206ENST00000474067 TPTE2Q6XPS3 522 aa26.72■■□□□ 1.87
SNX13-206ENST00000474067 NBPF5PQ86XG9 351 aaPredicted RBP26.72■■□□□ 1.87
SNX13-206ENST00000474067 C2CD5Q86YS7 1000 aa26.72■■□□□ 1.87
SNX13-206ENST00000474067 NBPF15Q8N660 670 aa26.72■■□□□ 1.87
SNX13-206ENST00000474067 TTLL6Q8N841 843 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms