RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 CNTNAP4Q9C0A0 1308 aa20.69■□□□□ 0.9
PCOLCE-205ENST00000472348 C4BP0C0L5 1744 aa20.68■□□□□ 0.9
PCOLCE-205ENST00000472348 QSER1Q2KHR3 1735 aa20.68■□□□□ 0.9
PCOLCE-205ENST00000472348 CCDC30Q5VVM6 783 aa20.68■□□□□ 0.9
PCOLCE-205ENST00000472348 MYH14Q7Z406 1995 aaKnown RBP20.67■□□□□ 0.9
PCOLCE-205ENST00000472348 CYP19A1P11511 503 aaPredicted RBP20.67■□□□□ 0.9
PCOLCE-205ENST00000472348 PROM2Q8N271 834 aa20.67■□□□□ 0.9
PCOLCE-205ENST00000472348 NUP188Q5SRE5 1749 aa20.67■□□□□ 0.9
PCOLCE-205ENST00000472348 TSPYL6Q8N831 410 aa20.66■□□□□ 0.9
PCOLCE-205ENST00000472348 USP16Q9Y5T5 823 aa20.66■□□□□ 0.9
PCOLCE-205ENST00000472348 ITPK1Q13572 414 aa20.65■□□□□ 0.9
PCOLCE-205ENST00000472348 DNAJC10Q8IXB1 793 aa20.65■□□□□ 0.9
PCOLCE-205ENST00000472348 DBF4Q9UBU7 674 aaPredicted RBP20.65■□□□□ 0.9
PCOLCE-205ENST00000472348 PSDA5PKW4 1024 aaPredicted RBP20.64■□□□□ 0.89
PCOLCE-205ENST00000472348 KRT24Q2M2I5 525 aa20.64■□□□□ 0.89
PCOLCE-205ENST00000472348 HDGFL1Q5TGJ6 251 aa20.64■□□□□ 0.89
PCOLCE-205ENST00000472348 DDX21Q9NR30 783 aaKnown RBP eCLIP20.64■□□□□ 0.89
PCOLCE-205ENST00000472348 UBR3Q6ZT12 1888 aa20.64■□□□□ 0.89
PCOLCE-205ENST00000472348 RGL2O15211 777 aa20.63■□□□□ 0.89
PCOLCE-205ENST00000472348 LRRC4BQ9NT99 713 aa20.63■□□□□ 0.89
PCOLCE-205ENST00000472348 IL6STP40189 918 aaPredicted RBP20.62■□□□□ 0.89
PCOLCE-205ENST00000472348 STK31Q9BXU1 1019 aa20.62■□□□□ 0.89
PCOLCE-205ENST00000472348 CCDC87Q9NVE4 849 aa20.62■□□□□ 0.89
PCOLCE-205ENST00000472348 HYPKQ9NX55 129 aa20.61■□□□□ 0.89
PCOLCE-205ENST00000472348 PRAMEF22A3QJZ6 481 aa20.6■□□□□ 0.89
PCOLCE-205ENST00000472348 ELL2O00472 640 aaPredicted RBP20.6■□□□□ 0.89
PCOLCE-205ENST00000472348 ADRA2BP18089 450 aa20.6■□□□□ 0.89
PCOLCE-205ENST00000472348 CRKLP46109 303 aaKnown RBP20.6■□□□□ 0.89
PCOLCE-205ENST00000472348 RARSP54136 660 aaKnown RBP20.6■□□□□ 0.89
PCOLCE-205ENST00000472348 PDIA6Q15084 440 aa20.6■□□□□ 0.89
PCOLCE-205ENST00000472348 INTS5Q6P9B9 1019 aaKnown RBP20.6■□□□□ 0.89
PCOLCE-205ENST00000472348 LINC00116Q8NCU8 138 aa20.6■□□□□ 0.89
PCOLCE-205ENST00000472348 RPS6KA4O75676 772 aa20.59■□□□□ 0.89
PCOLCE-205ENST00000472348 R3HDM1Q15032 1099 aaKnown RBP20.59■□□□□ 0.89
PCOLCE-205ENST00000472348 EIF5P55010 431 aaKnown RBP20.58■□□□□ 0.89
PCOLCE-205ENST00000472348 LRP10Q7Z4F1 713 aa20.58■□□□□ 0.89
PCOLCE-205ENST00000472348 FLAD1Q8NFF5 587 aa20.58■□□□□ 0.89
PCOLCE-205ENST00000472348 EIF2S2P20042 333 aaKnown RBP20.57■□□□□ 0.88
PCOLCE-205ENST00000472348 AKT1S1Q96B36 256 aa20.57■□□□□ 0.88
PCOLCE-205ENST00000472348 KIF16BQ96L93 1317 aa20.56■□□□□ 0.88
PCOLCE-205ENST00000472348 A0A087WZG4 1122 aa20.56■□□□□ 0.88
PCOLCE-205ENST00000472348 NBPF26B4DH59 902 aa20.56■□□□□ 0.88
PCOLCE-205ENST00000472348 SSFA2P28290 1259 aa20.56■□□□□ 0.88
PCOLCE-205ENST00000472348 NBPF14Q5TI25 921 aa20.56■□□□□ 0.88
PCOLCE-205ENST00000472348 NBPF10Q6P3W6 841 aaKnown RBP20.56■□□□□ 0.88
PCOLCE-205ENST00000472348 NBPF15Q8N660 670 aa20.56■□□□□ 0.88
PCOLCE-205ENST00000472348 ARHGAP45Q92619 1136 aa20.56■□□□□ 0.88
PCOLCE-205ENST00000472348 RCAN3Q9UKA8 241 aa20.56■□□□□ 0.88
PCOLCE-205ENST00000472348 PTPRCP08575 1304 aa20.55■□□□□ 0.88
PCOLCE-205ENST00000472348 A1BGP04217 495 aa20.55■□□□□ 0.88
PCOLCE-205ENST00000472348 CENPBP07199 599 aaPredicted RBP20.55■□□□□ 0.88
PCOLCE-205ENST00000472348 SSH1Q8WYL5 1049 aa20.55■□□□□ 0.88
PCOLCE-205ENST00000472348 CHPF2Q9P2E5 772 aa20.55■□□□□ 0.88
PCOLCE-205ENST00000472348 ZBTB1Q9Y2K1 713 aa20.55■□□□□ 0.88
PCOLCE-205ENST00000472348 RTCBQ9Y3I0 505 aaKnown RBP20.55■□□□□ 0.88
PCOLCE-205ENST00000472348 TUBGCP6Q96RT7 1819 aa20.55■□□□□ 0.88
PCOLCE-205ENST00000472348 SLC4A2P04920 1241 aa20.54■□□□□ 0.88
PCOLCE-205ENST00000472348 MRPL50Q8N5N7 158 aaKnown RBP20.54■□□□□ 0.88
PCOLCE-205ENST00000472348 AK7Q96M32 723 aa20.54■□□□□ 0.88
PCOLCE-205ENST00000472348 BCORQ6W2J9 1755 aa20.54■□□□□ 0.88
PCOLCE-205ENST00000472348 C4AP0C0L4 1744 aa20.53■□□□□ 0.88
PCOLCE-205ENST00000472348 NPM2Q86SE8 214 aaKnown RBP20.53■□□□□ 0.88
PCOLCE-205ENST00000472348 ANO8Q9HCE9 1232 aaPredicted RBP20.53■□□□□ 0.88
PCOLCE-205ENST00000472348 IBTKQ9P2D0 1353 aaPredicted RBP20.53■□□□□ 0.88
PCOLCE-205ENST00000472348 COL15A1P39059 1388 aa20.52■□□□□ 0.88
PCOLCE-205ENST00000472348 SLC15A2Q16348 729 aa20.52■□□□□ 0.88
PCOLCE-205ENST00000472348 SMC4Q9NTJ3 1288 aa20.52■□□□□ 0.88
PCOLCE-205ENST00000472348 N4BP2Q86UW6 1770 aaPredicted RBP20.51■□□□□ 0.87
PCOLCE-205ENST00000472348 SCN7AQ01118 1682 aa20.51■□□□□ 0.87
PCOLCE-205ENST00000472348 ERVV-1B6SEH8 477 aa20.51■□□□□ 0.87
PCOLCE-205ENST00000472348 IPO8O15397 1037 aaKnown RBP20.51■□□□□ 0.87
PCOLCE-205ENST00000472348 DDX58O95786 925 aaKnown RBP20.51■□□□□ 0.87
PCOLCE-205ENST00000472348 STK32BQ9NY57 414 aa20.51■□□□□ 0.87
PCOLCE-205ENST00000472348 GNPATO15228 680 aa20.5■□□□□ 0.87
PCOLCE-205ENST00000472348 KCNQ4P56696 695 aa20.5■□□□□ 0.87
PCOLCE-205ENST00000472348 FLIIQ13045 1269 aa20.5■□□□□ 0.87
PCOLCE-205ENST00000472348 NUP98P52948 1817 aa20.5■□□□□ 0.87
PCOLCE-205ENST00000472348 CANXP27824 592 aaKnown RBP20.49■□□□□ 0.87
PCOLCE-205ENST00000472348 TRAPPC3LQ5T215 181 aa20.49■□□□□ 0.87
PCOLCE-205ENST00000472348 CLEC4GQ6UXB4 293 aa20.49■□□□□ 0.87
PCOLCE-205ENST00000472348 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.49■□□□□ 0.87
PCOLCE-205ENST00000472348 PXDNLA1KZ92 1463 aa20.49■□□□□ 0.87
PCOLCE-205ENST00000472348 ANKRD36CQ5JPF3 1778 aa20.49■□□□□ 0.87
PCOLCE-205ENST00000472348 ARFGEF2Q9Y6D5 1785 aa20.49■□□□□ 0.87
PCOLCE-205ENST00000472348 MS4A1P11836 297 aa20.48■□□□□ 0.87
PCOLCE-205ENST00000472348 PROSER3Q2NL68 480 aa20.48■□□□□ 0.87
PCOLCE-205ENST00000472348 PLBD2Q8NHP8 589 aa20.48■□□□□ 0.87
PCOLCE-205ENST00000472348 NARFQ9UHQ1 456 aa20.48■□□□□ 0.87
PCOLCE-205ENST00000472348 RNF123Q5XPI4 1314 aa20.48■□□□□ 0.87
PCOLCE-205ENST00000472348 MYL6BP14649 208 aa20.47■□□□□ 0.87
PCOLCE-205ENST00000472348 ZNF827Q17R98 1081 aa20.47■□□□□ 0.87
PCOLCE-205ENST00000472348 ANKRD13DQ6ZTN6 518 aa20.47■□□□□ 0.87
PCOLCE-205ENST00000472348 COPS6Q7L5N1 327 aa20.47■□□□□ 0.87
PCOLCE-205ENST00000472348 NECTIN2Q92692 538 aa20.47■□□□□ 0.87
PCOLCE-205ENST00000472348 API5Q9BZZ5 524 aaKnown RBP20.47■□□□□ 0.87
PCOLCE-205ENST00000472348 MAP3K15Q6ZN16 1313 aa20.47■□□□□ 0.87
PCOLCE-205ENST00000472348 KSR2Q6VAB6 950 aa20.46■□□□□ 0.87
PCOLCE-205ENST00000472348 KIF6Q6ZMV9 814 aa20.46■□□□□ 0.87
PCOLCE-205ENST00000472348 PHAXQ9H814 394 aaKnown RBP20.46■□□□□ 0.87
PCOLCE-205ENST00000472348 TFCP2L1Q9NZI6 479 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms