RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 CHMP4AQ9BY43 222 aa16.37■□□□□ 0.21
SND1-209ENST00000470723 MYH14Q7Z406 1995 aaKnown RBP16.37■□□□□ 0.21
SND1-209ENST00000470723 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
SND1-209ENST00000470723 SLC15A2Q16348 729 aa16.36■□□□□ 0.21
SND1-209ENST00000470723 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
SND1-209ENST00000470723 VAMP4O75379 141 aa16.35■□□□□ 0.21
SND1-209ENST00000470723 RPS6KA4O75676 772 aa16.35■□□□□ 0.21
SND1-209ENST00000470723 CRKLP46109 303 aaKnown RBP16.35■□□□□ 0.21
SND1-209ENST00000470723 EXOSC9Q06265 439 aaKnown RBP16.35■□□□□ 0.21
SND1-209ENST00000470723 TSPYL6Q8N831 410 aa16.35■□□□□ 0.21
SND1-209ENST00000470723 TJP1Q07157 1748 aa16.35■□□□□ 0.21
SND1-209ENST00000470723 C5P01031 1676 aa16.34■□□□□ 0.21
SND1-209ENST00000470723 COL5A3P25940 1745 aaPredicted RBP16.34■□□□□ 0.21
SND1-209ENST00000470723 PSDA5PKW4 1024 aaPredicted RBP16.34■□□□□ 0.21
SND1-209ENST00000470723 CCDC87Q9NVE4 849 aa16.34■□□□□ 0.21
SND1-209ENST00000470723 ERBB4Q15303 1308 aa16.34■□□□□ 0.21
SND1-209ENST00000470723 NUP188Q5SRE5 1749 aa16.33■□□□□ 0.21
SND1-209ENST00000470723 A1BGP04217 495 aa16.33■□□□□ 0.2
SND1-209ENST00000470723 CT47B1P0C2W7 299 aaPredicted RBP16.33■□□□□ 0.2
SND1-209ENST00000470723 EIF5P55010 431 aaKnown RBP16.33■□□□□ 0.2
SND1-209ENST00000470723 PDIA6Q15084 440 aa16.33■□□□□ 0.2
SND1-209ENST00000470723 ZNF827Q17R98 1081 aa16.33■□□□□ 0.2
SND1-209ENST00000470723 ANO8Q9HCE9 1232 aaPredicted RBP16.33■□□□□ 0.2
SND1-209ENST00000470723 STK32BQ9NY57 414 aa16.33■□□□□ 0.2
SND1-209ENST00000470723 NBPF26B4DH59 902 aa16.32■□□□□ 0.2
SND1-209ENST00000470723 C4BP0C0L5 1744 aa16.32■□□□□ 0.2
SND1-209ENST00000470723 IL6STP40189 918 aaPredicted RBP16.32■□□□□ 0.2
SND1-209ENST00000470723 TWISTNBQ3B726 338 aaPredicted RBP16.32■□□□□ 0.2
SND1-209ENST00000470723 NBPF10Q6P3W6 841 aaKnown RBP16.32■□□□□ 0.2
SND1-209ENST00000470723 NBPF15Q8N660 670 aa16.32■□□□□ 0.2
SND1-209ENST00000470723 FLAD1Q8NFF5 587 aa16.32■□□□□ 0.2
SND1-209ENST00000470723 ZNF428Q96B54 188 aa16.32■□□□□ 0.2
SND1-209ENST00000470723 ELL2O00472 640 aaPredicted RBP16.31■□□□□ 0.2
SND1-209ENST00000470723 ADRA2BP18089 450 aa16.31■□□□□ 0.2
SND1-209ENST00000470723 SSFA2P28290 1259 aa16.31■□□□□ 0.2
SND1-209ENST00000470723 LRP10Q7Z4F1 713 aa16.31■□□□□ 0.2
SND1-209ENST00000470723 AMIGO3Q86WK7 504 aa16.3■□□□□ 0.2
SND1-209ENST00000470723 AK7Q96M32 723 aa16.3■□□□□ 0.2
SND1-209ENST00000470723 DDX21Q9NR30 783 aaKnown RBP eCLIP16.3■□□□□ 0.2
SND1-209ENST00000470723 TFCP2L1Q9NZI6 479 aa16.3■□□□□ 0.2
SND1-209ENST00000470723 ZBTB1Q9Y2K1 713 aa16.3■□□□□ 0.2
SND1-209ENST00000470723 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
SND1-209ENST00000470723 EIF2S2P20042 333 aaKnown RBP16.29■□□□□ 0.2
SND1-209ENST00000470723 TRAPPC3LQ5T215 181 aa16.29■□□□□ 0.2
SND1-209ENST00000470723 HDGFL1Q5TGJ6 251 aa16.29■□□□□ 0.2
SND1-209ENST00000470723 CCDC30Q5VVM6 783 aa16.29■□□□□ 0.2
SND1-209ENST00000470723 DBF4Q9UBU7 674 aaPredicted RBP16.29■□□□□ 0.2
SND1-209ENST00000470723 GNPATO15228 680 aa16.28■□□□□ 0.2
SND1-209ENST00000470723 CANXP27824 592 aaKnown RBP16.28■□□□□ 0.2
SND1-209ENST00000470723 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
SND1-209ENST00000470723 UBR3Q6ZT12 1888 aa16.28■□□□□ 0.2
SND1-209ENST00000470723 CACNA1FO60840 1977 aa16.27■□□□□ 0.2
SND1-209ENST00000470723 PNPLA7Q6ZV29 1317 aa16.27■□□□□ 0.2
SND1-209ENST00000470723 A0A087WZG4 1122 aa16.27■□□□□ 0.2
SND1-209ENST00000470723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.27■□□□□ 0.2
SND1-209ENST00000470723 RGL2O15211 777 aa16.27■□□□□ 0.2
SND1-209ENST00000470723 COL23A1Q86Y22 540 aaPredicted RBP16.27■□□□□ 0.2
SND1-209ENST00000470723 LAMB4A4D0S4 1761 aa16.27■□□□□ 0.2
SND1-209ENST00000470723 QSER1Q2KHR3 1735 aa16.27■□□□□ 0.19
SND1-209ENST00000470723 SLC16A10Q8TF71 515 aa16.26■□□□□ 0.19
SND1-209ENST00000470723 HYPKQ9NX55 129 aa16.26■□□□□ 0.19
SND1-209ENST00000470723 LRP5O75197 1615 aa16.26■□□□□ 0.19
SND1-209ENST00000470723 BRPF1P55201 1214 aaPredicted RBP16.25■□□□□ 0.19
SND1-209ENST00000470723 PROSER3Q2NL68 480 aa16.25■□□□□ 0.19
SND1-209ENST00000470723 ALDH1L2Q3SY69 923 aa16.25■□□□□ 0.19
SND1-209ENST00000470723 CHPF2Q9P2E5 772 aa16.25■□□□□ 0.19
SND1-209ENST00000470723 NARFQ9UHQ1 456 aa16.25■□□□□ 0.19
SND1-209ENST00000470723 R3HDM1Q15032 1099 aaKnown RBP16.24■□□□□ 0.19
SND1-209ENST00000470723 ERVV-1B6SEH8 477 aa16.23■□□□□ 0.19
SND1-209ENST00000470723 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
SND1-209ENST00000470723 PIP4K2AP48426 406 aaPredicted RBP16.23■□□□□ 0.19
SND1-209ENST00000470723 SMIM5Q71RC9 77 aa16.23■□□□□ 0.19
SND1-209ENST00000470723 NECTIN2Q92692 538 aa16.23■□□□□ 0.19
SND1-209ENST00000470723 MYL6BP14649 208 aa16.22■□□□□ 0.19
SND1-209ENST00000470723 RFC4P35249 363 aa16.22■□□□□ 0.19
SND1-209ENST00000470723 CLEC4GQ6UXB4 293 aa16.22■□□□□ 0.19
SND1-209ENST00000470723 COPS6Q7L5N1 327 aa16.22■□□□□ 0.19
SND1-209ENST00000470723 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
SND1-209ENST00000470723 STK31Q9BXU1 1019 aa16.22■□□□□ 0.19
SND1-209ENST00000470723 PDGFDQ9GZP0 370 aaPredicted RBP16.22■□□□□ 0.19
SND1-209ENST00000470723 COL15A1P39059 1388 aa16.22■□□□□ 0.19
SND1-209ENST00000470723 TUBGCP6Q96RT7 1819 aa16.22■□□□□ 0.19
SND1-209ENST00000470723 ANXA1P04083 346 aa16.21■□□□□ 0.19
SND1-209ENST00000470723 RARSP54136 660 aaKnown RBP16.21■□□□□ 0.19
SND1-209ENST00000470723 MRPL50Q8N5N7 158 aaKnown RBP16.21■□□□□ 0.19
SND1-209ENST00000470723 SSH1Q8WYL5 1049 aa16.21■□□□□ 0.19
SND1-209ENST00000470723 USP42Q9H9J4 1324 aaKnown RBP16.2■□□□□ 0.18
SND1-209ENST00000470723 CAMTA2O94983 1202 aa16.2■□□□□ 0.18
SND1-209ENST00000470723 TTLL7Q6ZT98 887 aa16.2■□□□□ 0.18
SND1-209ENST00000470723 NPM2Q86SE8 214 aaKnown RBP16.2■□□□□ 0.18
SND1-209ENST00000470723 DZIP3Q86Y13 1208 aaKnown RBP16.2■□□□□ 0.18
SND1-209ENST00000470723 XAGE3Q8WTP9 111 aa16.2■□□□□ 0.18
SND1-209ENST00000470723 PHAXQ9H814 394 aaKnown RBP16.2■□□□□ 0.18
SND1-209ENST00000470723 BCL2L12Q9HB09 334 aa16.2■□□□□ 0.18
SND1-209ENST00000470723 TBC1D2BQ9UPU7 963 aa16.2■□□□□ 0.18
SND1-209ENST00000470723 ZPR1O75312 459 aa16.19■□□□□ 0.18
SND1-209ENST00000470723 PHF14O94880 888 aa16.19■□□□□ 0.18
SND1-209ENST00000470723 GYS1P13807 737 aa16.19■□□□□ 0.18
SND1-209ENST00000470723 IFFO2Q5TF58 517 aa16.19■□□□□ 0.18
SND1-209ENST00000470723 ANKRD13DQ6ZTN6 518 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms