RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 CHL1O00533 1208 aa19.5■□□□□ 0.71
CDC42SE1-203ENST00000470278 ZNF853P0CG23 659 aa19.5■□□□□ 0.71
CDC42SE1-203ENST00000470278 POLD1P28340 1107 aa19.5■□□□□ 0.71
CDC42SE1-203ENST00000470278 ATP6V1AP38606 617 aa19.5■□□□□ 0.71
CDC42SE1-203ENST00000470278 SMIM5Q71RC9 77 aa19.5■□□□□ 0.71
CDC42SE1-203ENST00000470278 KLHL34Q8N239 644 aa19.5■□□□□ 0.71
CDC42SE1-203ENST00000470278 ZNF496Q96IT1 587 aaPredicted RBP19.5■□□□□ 0.71
CDC42SE1-203ENST00000470278 FMNL2Q96PY5 1086 aa19.5■□□□□ 0.71
CDC42SE1-203ENST00000470278 RBM42Q9BTD8 480 aaKnown RBP19.5■□□□□ 0.71
CDC42SE1-203ENST00000470278 ITPK1Q13572 414 aa19.49■□□□□ 0.71
CDC42SE1-203ENST00000470278 WDR63Q8IWG1 891 aa19.49■□□□□ 0.71
CDC42SE1-203ENST00000470278 TSPYL4Q9UJ04 414 aa19.49■□□□□ 0.71
CDC42SE1-203ENST00000470278 KIF13BQ9NQT8 1826 aa19.48■□□□□ 0.71
CDC42SE1-203ENST00000470278 KCNQ3O43525 872 aa19.48■□□□□ 0.71
CDC42SE1-203ENST00000470278 GNAI1P63096 354 aa19.48■□□□□ 0.71
CDC42SE1-203ENST00000470278 GPR162Q16538 588 aa19.48■□□□□ 0.71
CDC42SE1-203ENST00000470278 MIS18AQ9NYP9 233 aa19.47■□□□□ 0.71
CDC42SE1-203ENST00000470278 MYH14Q7Z406 1995 aaKnown RBP19.46■□□□□ 0.71
CDC42SE1-203ENST00000470278 SENP3-EIF4A1A0A087X0R7 540 aa19.46■□□□□ 0.71
CDC42SE1-203ENST00000470278 EIF4A1P60842 406 aaKnown RBP19.46■□□□□ 0.71
CDC42SE1-203ENST00000470278 LINC00116Q8NCU8 138 aa19.46■□□□□ 0.71
CDC42SE1-203ENST00000470278 CNTNAP4Q9C0A0 1308 aa19.46■□□□□ 0.71
CDC42SE1-203ENST00000470278 TEX13AQ9BXU3 409 aaPredicted RBP19.45■□□□□ 0.7
CDC42SE1-203ENST00000470278 MBIPQ9NS73 344 aa19.45■□□□□ 0.7
CDC42SE1-203ENST00000470278 C4AP0C0L4 1744 aa19.45■□□□□ 0.7
CDC42SE1-203ENST00000470278 SNRPA1P09661 255 aaKnown RBP19.44■□□□□ 0.7
CDC42SE1-203ENST00000470278 RC3H1Q5TC82 1133 aaKnown RBP19.44■□□□□ 0.7
CDC42SE1-203ENST00000470278 DNAJC10Q8IXB1 793 aa19.44■□□□□ 0.7
CDC42SE1-203ENST00000470278 SALL2Q9Y467 1007 aaPredicted RBP19.44■□□□□ 0.7
CDC42SE1-203ENST00000470278 C1QTNF8P60827 252 aa19.43■□□□□ 0.7
CDC42SE1-203ENST00000470278 LAS1LQ9Y4W2 734 aaKnown RBP19.43■□□□□ 0.7
CDC42SE1-203ENST00000470278 BRCA1P38398 1863 aaKnown RBP19.43■□□□□ 0.7
CDC42SE1-203ENST00000470278 ADCY9O60503 1353 aa19.43■□□□□ 0.7
CDC42SE1-203ENST00000470278 GIGYF1O75420 1035 aaPredicted RBP19.42■□□□□ 0.7
CDC42SE1-203ENST00000470278 CYP19A1P11511 503 aaPredicted RBP19.42■□□□□ 0.7
CDC42SE1-203ENST00000470278 STARD3NLO95772 234 aa19.41■□□□□ 0.7
CDC42SE1-203ENST00000470278 PELP1Q8IZL8 1130 aaKnown RBP19.41■□□□□ 0.7
CDC42SE1-203ENST00000470278 AK7Q96M32 723 aa19.41■□□□□ 0.7
CDC42SE1-203ENST00000470278 N4BP2Q86UW6 1770 aaPredicted RBP19.41■□□□□ 0.7
CDC42SE1-203ENST00000470278 MSH5O43196 834 aa19.4■□□□□ 0.7
CDC42SE1-203ENST00000470278 HOXB7P09629 217 aa19.4■□□□□ 0.7
CDC42SE1-203ENST00000470278 CRKLP46109 303 aaKnown RBP19.4■□□□□ 0.7
CDC42SE1-203ENST00000470278 FANCIQ9NVI1 1328 aa19.4■□□□□ 0.7
CDC42SE1-203ENST00000470278 HNRNPUQ00839 825 aaKnown RBP eCLIP19.39■□□□□ 0.69
CDC42SE1-203ENST00000470278 GOLGA2Q08379 1002 aa19.39■□□□□ 0.69
CDC42SE1-203ENST00000470278 MYH16Q9H6N6 1097 aa19.39■□□□□ 0.69
CDC42SE1-203ENST00000470278 SOS1Q07889 1333 aaPredicted RBP19.39■□□□□ 0.69
CDC42SE1-203ENST00000470278 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.38■□□□□ 0.69
CDC42SE1-203ENST00000470278 SSFA2P28290 1259 aa19.38■□□□□ 0.69
CDC42SE1-203ENST00000470278 INTS5Q6P9B9 1019 aaKnown RBP19.38■□□□□ 0.69
CDC42SE1-203ENST00000470278 SPINK5Q9NQ38 1064 aaPredicted RBP19.38■□□□□ 0.69
CDC42SE1-203ENST00000470278 CCDC87Q9NVE4 849 aa19.38■□□□□ 0.69
CDC42SE1-203ENST00000470278 ATP10DQ9P241 1426 aa19.38■□□□□ 0.69
CDC42SE1-203ENST00000470278 CD2APQ9Y5K6 639 aa19.38■□□□□ 0.69
CDC42SE1-203ENST00000470278 ZBED9Q6R2W3 1325 aa19.37■□□□□ 0.69
CDC42SE1-203ENST00000470278 PRAMEF22A3QJZ6 481 aa19.37■□□□□ 0.69
CDC42SE1-203ENST00000470278 E9PSI1 815 aa19.37■□□□□ 0.69
CDC42SE1-203ENST00000470278 GNPATO15228 680 aa19.37■□□□□ 0.69
CDC42SE1-203ENST00000470278 ADRA2BP18089 450 aa19.37■□□□□ 0.69
CDC42SE1-203ENST00000470278 FLAD1Q8NFF5 587 aa19.37■□□□□ 0.69
CDC42SE1-203ENST00000470278 TSR2Q969E8 191 aaKnown RBP19.37■□□□□ 0.69
CDC42SE1-203ENST00000470278 USP16Q9Y5T5 823 aa19.37■□□□□ 0.69
CDC42SE1-203ENST00000470278 ERBB4Q15303 1308 aa19.36■□□□□ 0.69
CDC42SE1-203ENST00000470278 RPS6KA4O75676 772 aa19.36■□□□□ 0.69
CDC42SE1-203ENST00000470278 PHF14O94880 888 aa19.36■□□□□ 0.69
CDC42SE1-203ENST00000470278 KRT24Q2M2I5 525 aa19.35■□□□□ 0.69
CDC42SE1-203ENST00000470278 ZBTB1Q9Y2K1 713 aa19.35■□□□□ 0.69
CDC42SE1-203ENST00000470278 RTCBQ9Y3I0 505 aaKnown RBP19.35■□□□□ 0.69
CDC42SE1-203ENST00000470278 PXDNLA1KZ92 1463 aa19.34■□□□□ 0.69
CDC42SE1-203ENST00000470278 SCN7AQ01118 1682 aa19.33■□□□□ 0.69
CDC42SE1-203ENST00000470278 COL15A1P39059 1388 aa19.33■□□□□ 0.69
CDC42SE1-203ENST00000470278 IL6STP40189 918 aaPredicted RBP19.33■□□□□ 0.68
CDC42SE1-203ENST00000470278 SLFN5Q08AF3 891 aa19.33■□□□□ 0.68
CDC42SE1-203ENST00000470278 DUSP27Q5VZP5 1158 aa19.33■□□□□ 0.68
CDC42SE1-203ENST00000470278 GRIN3BO60391 1043 aa19.32■□□□□ 0.68
CDC42SE1-203ENST00000470278 TRMT2AQ8IZ69 625 aaKnown RBP19.32■□□□□ 0.68
CDC42SE1-203ENST00000470278 C8orf58Q8NAV2 365 aa19.32■□□□□ 0.68
CDC42SE1-203ENST00000470278 BCORQ6W2J9 1755 aa19.32■□□□□ 0.68
CDC42SE1-203ENST00000470278 A1BGP04217 495 aa19.31■□□□□ 0.68
CDC42SE1-203ENST00000470278 EIF5P55010 431 aaKnown RBP19.31■□□□□ 0.68
CDC42SE1-203ENST00000470278 CHMP4AQ9BY43 222 aa19.31■□□□□ 0.68
CDC42SE1-203ENST00000470278 C10orf71Q711Q0 1435 aa19.31■□□□□ 0.68
CDC42SE1-203ENST00000470278 NBPF26B4DH59 902 aa19.3■□□□□ 0.68
CDC42SE1-203ENST00000470278 HDGFL1Q5TGJ6 251 aa19.3■□□□□ 0.68
CDC42SE1-203ENST00000470278 NBPF10Q6P3W6 841 aaKnown RBP19.3■□□□□ 0.68
CDC42SE1-203ENST00000470278 NBPF15Q8N660 670 aa19.3■□□□□ 0.68
CDC42SE1-203ENST00000470278 WWC3Q9ULE0 1092 aa19.3■□□□□ 0.68
CDC42SE1-203ENST00000470278 ARFGEF1Q9Y6D6 1849 aa19.3■□□□□ 0.68
CDC42SE1-203ENST00000470278 CANXP27824 592 aaKnown RBP19.29■□□□□ 0.68
CDC42SE1-203ENST00000470278 TWISTNBQ3B726 338 aaPredicted RBP19.29■□□□□ 0.68
CDC42SE1-203ENST00000470278 TRAPPC3LQ5T215 181 aa19.29■□□□□ 0.68
CDC42SE1-203ENST00000470278 CDCA7LQ96GN5 454 aa19.29■□□□□ 0.68
CDC42SE1-203ENST00000470278 EXOSC9Q06265 439 aaKnown RBP19.28■□□□□ 0.68
CDC42SE1-203ENST00000470278 PDIA6Q15084 440 aa19.28■□□□□ 0.68
CDC42SE1-203ENST00000470278 TSPYL6Q8N831 410 aa19.28■□□□□ 0.68
CDC42SE1-203ENST00000470278 USP42Q9H9J4 1324 aaKnown RBP19.27■□□□□ 0.68
CDC42SE1-203ENST00000470278 A0A087WZG4 1122 aa19.27■□□□□ 0.68
CDC42SE1-203ENST00000470278 EIF2S2P20042 333 aaKnown RBP19.27■□□□□ 0.68
CDC42SE1-203ENST00000470278 LRP10Q7Z4F1 713 aa19.27■□□□□ 0.68
CDC42SE1-203ENST00000470278 ARHGEF1Q92888 912 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms