RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 A0A087WZG4 1122 aa28.16■■■□□ 2.1
RTN4R-205ENST00000469601 CANXP27824 592 aaKnown RBP28.16■■■□□ 2.1
RTN4R-205ENST00000469601 FKBP8Q14318 412 aa28.16■■■□□ 2.1
RTN4R-205ENST00000469601 NARFQ9UHQ1 456 aa28.16■■■□□ 2.1
RTN4R-205ENST00000469601 SIPA1L3O60292 1781 aaPredicted RBP28.15■■■□□ 2.1
RTN4R-205ENST00000469601 TGFB2P61812 414 aa28.15■■■□□ 2.1
RTN4R-205ENST00000469601 DCTN1Q14203 1278 aa28.15■■■□□ 2.1
RTN4R-205ENST00000469601 TAF7Q15545 349 aaPredicted RBP28.15■■■□□ 2.1
RTN4R-205ENST00000469601 NFE2L2Q16236 605 aa28.15■■■□□ 2.1
RTN4R-205ENST00000469601 YBX3P16989 372 aaKnown RBP eCLIP28.14■■■□□ 2.1
RTN4R-205ENST00000469601 USPL1Q5W0Q7 1092 aa28.14■■■□□ 2.1
RTN4R-205ENST00000469601 NPM2Q86SE8 214 aaKnown RBP28.14■■■□□ 2.1
RTN4R-205ENST00000469601 C4AP0C0L4 1744 aa28.14■■■□□ 2.1
RTN4R-205ENST00000469601 PNISRQ8TF01 805 aaKnown RBP28.13■■■□□ 2.09
RTN4R-205ENST00000469601 KCNQ3O43525 872 aa28.12■■■□□ 2.09
RTN4R-205ENST00000469601 EIF5P55010 431 aaKnown RBP28.12■■■□□ 2.09
RTN4R-205ENST00000469601 C10orf71Q711Q0 1435 aa28.11■■■□□ 2.09
RTN4R-205ENST00000469601 SNRPA1P09661 255 aaKnown RBP28.11■■■□□ 2.09
RTN4R-205ENST00000469601 IL6STP40189 918 aaPredicted RBP28.1■■■□□ 2.09
RTN4R-205ENST00000469601 TM4SF1P30408 202 aa28.09■■■□□ 2.09
RTN4R-205ENST00000469601 PRKRIP1Q9H875 184 aaPredicted RBP28.08■■■□□ 2.09
RTN4R-205ENST00000469601 DDR1Q08345 913 aa28.07■■■□□ 2.08
RTN4R-205ENST00000469601 WDR43Q15061 677 aaKnown RBP eCLIP28.07■■■□□ 2.08
RTN4R-205ENST00000469601 POLRMTO00411 1230 aaKnown RBP28.06■■■□□ 2.08
RTN4R-205ENST00000469601 A1BGP04217 495 aa28.06■■■□□ 2.08
RTN4R-205ENST00000469601 PXDNLA1KZ92 1463 aa28.06■■■□□ 2.08
RTN4R-205ENST00000469601 ZNF330Q9Y3S2 320 aaPredicted RBP28.05■■■□□ 2.08
RTN4R-205ENST00000469601 LMOD3Q0VAK6 560 aa28.04■■■□□ 2.08
RTN4R-205ENST00000469601 NFIXQ14938 502 aa28.04■■■□□ 2.08
RTN4R-205ENST00000469601 USP16Q9Y5T5 823 aa28.04■■■□□ 2.08
RTN4R-205ENST00000469601 A0A0G2JLW4 131 aa28.03■■■□□ 2.08
RTN4R-205ENST00000469601 RIPK4P57078 832 aa28.03■■■□□ 2.08
RTN4R-205ENST00000469601 ZNF784Q8NCA9 323 aaPredicted RBP28.03■■■□□ 2.08
RTN4R-205ENST00000469601 BCL2L12Q9HB09 334 aa28.02■■■□□ 2.08
RTN4R-205ENST00000469601 DPEP1P16444 411 aa28.01■■■□□ 2.07
RTN4R-205ENST00000469601 MIS18AQ9NYP9 233 aa28.01■■■□□ 2.07
RTN4R-205ENST00000469601 KIF13BQ9NQT8 1826 aa28.01■■■□□ 2.07
RTN4R-205ENST00000469601 CHD4Q14839 1912 aa28■■■□□ 2.07
RTN4R-205ENST00000469601 WWC3Q9ULE0 1092 aa28■■■□□ 2.07
RTN4R-205ENST00000469601 TBC1D2BQ9UPU7 963 aa28■■■□□ 2.07
RTN4R-205ENST00000469601 TMPOP42166 694 aaKnown RBP27.99■■■□□ 2.07
RTN4R-205ENST00000469601 THUMPD2Q9BTF0 503 aaKnown RBP27.99■■■□□ 2.07
RTN4R-205ENST00000469601 PRAMEF22A3QJZ6 481 aa27.98■■■□□ 2.07
RTN4R-205ENST00000469601 SERPINB2P05120 415 aa27.98■■■□□ 2.07
RTN4R-205ENST00000469601 RUNDC1Q96C34 613 aa27.98■■■□□ 2.07
RTN4R-205ENST00000469601 BCS1LQ9Y276 419 aa27.98■■■□□ 2.07
RTN4R-205ENST00000469601 DZIP3Q86Y13 1208 aaKnown RBP27.97■■■□□ 2.07
RTN4R-205ENST00000469601 PIM2Q9P1W9 311 aa27.97■■■□□ 2.07
RTN4R-205ENST00000469601 EIF4A1P60842 406 aaKnown RBP27.96■■■□□ 2.07
RTN4R-205ENST00000469601 BABAM1Q9NWV8 329 aa27.96■■■□□ 2.07
RTN4R-205ENST00000469601 UTRNP46939 3433 aa27.95■■■□□ 2.07
RTN4R-205ENST00000469601 CAMTA2O94983 1202 aa27.95■■■□□ 2.06
RTN4R-205ENST00000469601 BICDL1Q6ZP65 573 aa27.95■■■□□ 2.06
RTN4R-205ENST00000469601 ADAMTS8Q9UP79 889 aa27.95■■■□□ 2.06
RTN4R-205ENST00000469601 GIGYF1O75420 1035 aaPredicted RBP27.94■■■□□ 2.06
RTN4R-205ENST00000469601 KCNA3P22001 575 aa27.94■■■□□ 2.06
RTN4R-205ENST00000469601 TBC1D9BQ66K14 1250 aa27.94■■■□□ 2.06
RTN4R-205ENST00000469601 CCDC146Q8IYE0 955 aa27.94■■■□□ 2.06
RTN4R-205ENST00000469601 TSPYL4Q9UJ04 414 aa27.94■■■□□ 2.06
RTN4R-205ENST00000469601 ZNF652Q9Y2D9 606 aa27.94■■■□□ 2.06
RTN4R-205ENST00000469601 DLG5Q8TDM6 1919 aa27.93■■■□□ 2.06
RTN4R-205ENST00000469601 CLEC4GQ6UXB4 293 aa27.93■■■□□ 2.06
RTN4R-205ENST00000469601 CARMIL3Q8ND23 1372 aa27.93■■■□□ 2.06
RTN4R-205ENST00000469601 RGL2O15211 777 aa27.92■■■□□ 2.06
RTN4R-205ENST00000469601 PIP4K2AP48426 406 aaPredicted RBP27.92■■■□□ 2.06
RTN4R-205ENST00000469601 SETDB2Q96T68 719 aa27.92■■■□□ 2.06
RTN4R-205ENST00000469601 ZNF316A6NFI3 1004 aaPredicted RBP27.91■■■□□ 2.06
RTN4R-205ENST00000469601 DALRD3Q5D0E6 543 aaKnown RBP27.91■■■□□ 2.06
RTN4R-205ENST00000469601 KIAA1551Q9HCM1 1747 aa27.91■■■□□ 2.06
RTN4R-205ENST00000469601 NBPF26B4DH59 902 aa27.9■■■□□ 2.06
RTN4R-205ENST00000469601 NEUROD2Q15784 382 aa27.9■■■□□ 2.06
RTN4R-205ENST00000469601 NBPF10Q6P3W6 841 aaKnown RBP27.9■■■□□ 2.06
RTN4R-205ENST00000469601 NBPF15Q8N660 670 aa27.9■■■□□ 2.06
RTN4R-205ENST00000469601 RRP7AQ9Y3A4 280 aaKnown RBP27.9■■■□□ 2.06
RTN4R-205ENST00000469601 SCN7AQ01118 1682 aa27.9■■■□□ 2.06
RTN4R-205ENST00000469601 CHRNA5P30532 468 aa27.89■■■□□ 2.06
RTN4R-205ENST00000469601 PDZRN3Q9UPQ7 1066 aa27.89■■■□□ 2.06
RTN4R-205ENST00000469601 KDM3BQ7LBC6 1761 aa27.88■■■□□ 2.05
RTN4R-205ENST00000469601 N4BP2Q86UW6 1770 aaPredicted RBP27.88■■■□□ 2.05
RTN4R-205ENST00000469601 GOLGB1Q14789 3259 aaKnown RBP27.88■■■□□ 2.05
RTN4R-205ENST00000469601 NPHP1O15259 732 aa27.87■■■□□ 2.05
RTN4R-205ENST00000469601 ARHGAP27Q6ZUM4 889 aa27.87■■■□□ 2.05
RTN4R-205ENST00000469601 NRXN2Q9P2S2 1712 aa27.87■■■□□ 2.05
RTN4R-205ENST00000469601 H0YIN7 160 aa27.86■■■□□ 2.05
RTN4R-205ENST00000469601 BRIP1Q9BX63 1249 aa27.86■■■□□ 2.05
RTN4R-205ENST00000469601 ERBB4Q15303 1308 aa27.86■■■□□ 2.05
RTN4R-205ENST00000469601 PDE6BP35913 854 aa27.85■■■□□ 2.05
RTN4R-205ENST00000469601 CNBD1Q8NA66 436 aa27.85■■■□□ 2.05
RTN4R-205ENST00000469601 ST5P78524 1137 aa27.84■■■□□ 2.05
RTN4R-205ENST00000469601 PRR5LQ6MZQ0 368 aa27.84■■■□□ 2.05
RTN4R-205ENST00000469601 C2CD5Q86YS7 1000 aa27.84■■■□□ 2.05
RTN4R-205ENST00000469601 TRIM35Q9UPQ4 493 aa27.83■■■□□ 2.05
RTN4R-205ENST00000469601 LAMB4A4D0S4 1761 aa27.82■■■□□ 2.04
RTN4R-205ENST00000469601 ATP10DQ9P241 1426 aa27.82■■■□□ 2.04
RTN4R-205ENST00000469601 ERVV-1B6SEH8 477 aa27.81■■■□□ 2.04
RTN4R-205ENST00000469601 CHL1O00533 1208 aa27.81■■■□□ 2.04
RTN4R-205ENST00000469601 KIF6Q6ZMV9 814 aa27.81■■■□□ 2.04
RTN4R-205ENST00000469601 NBPF5PQ86XG9 351 aaPredicted RBP27.81■■■□□ 2.04
RTN4R-205ENST00000469601 TTLL6Q8N841 843 aa27.81■■■□□ 2.04
RTN4R-205ENST00000469601 ADCY9O60503 1353 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms