RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 RHPN1Q8TCX5 695 aa16.37■□□□□ 0.21
BRAT1-203ENST00000467558 CABLES1Q8TDN4 633 aa16.37■□□□□ 0.21
BRAT1-203ENST00000467558 EVI5LQ96CN4 794 aa16.37■□□□□ 0.21
BRAT1-203ENST00000467558 NAT10Q9H0A0 1025 aaKnown RBP16.37■□□□□ 0.21
BRAT1-203ENST00000467558 TNNQ9UQP3 1299 aa16.37■□□□□ 0.21
BRAT1-203ENST00000467558 CDC42BPAQ5VT25 1732 aa16.36■□□□□ 0.21
BRAT1-203ENST00000467558 IMMTQ16891 758 aaKnown RBP16.36■□□□□ 0.21
BRAT1-203ENST00000467558 PRPF40BQ6NWY9 871 aaKnown RBP16.36■□□□□ 0.21
BRAT1-203ENST00000467558 SLC39A6Q13433 755 aa16.36■□□□□ 0.21
BRAT1-203ENST00000467558 COPS6Q7L5N1 327 aa16.36■□□□□ 0.21
BRAT1-203ENST00000467558 STK38Q15208 465 aa16.36■□□□□ 0.21
BRAT1-203ENST00000467558 RNF214Q8ND24 703 aa16.36■□□□□ 0.21
BRAT1-203ENST00000467558 XAGE3Q8WTP9 111 aa16.36■□□□□ 0.21
BRAT1-203ENST00000467558 TBC1D32Q96NH3 1257 aa16.36■□□□□ 0.21
BRAT1-203ENST00000467558 TBC1D2Q9BYX2 928 aa16.36■□□□□ 0.21
BRAT1-203ENST00000467558 ZMYM4Q5VZL5 1548 aa16.36■□□□□ 0.21
BRAT1-203ENST00000467558 ANKRD18BA2A2Z9 1011 aa16.35■□□□□ 0.21
BRAT1-203ENST00000467558 ZPR1O75312 459 aa16.35■□□□□ 0.21
BRAT1-203ENST00000467558 TDO2P48775 406 aa16.35■□□□□ 0.21
BRAT1-203ENST00000467558 KRT24Q2M2I5 525 aa16.35■□□□□ 0.21
BRAT1-203ENST00000467558 AIDAQ96BJ3 306 aa16.35■□□□□ 0.21
BRAT1-203ENST00000467558 RAI14Q9P0K7 980 aa16.35■□□□□ 0.21
BRAT1-203ENST00000467558 BLMP54132 1417 aaPredicted RBP16.35■□□□□ 0.21
BRAT1-203ENST00000467558 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
BRAT1-203ENST00000467558 JMYQ8N9B5 988 aa16.35■□□□□ 0.21
BRAT1-203ENST00000467558 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
BRAT1-203ENST00000467558 BABAM1Q9NWV8 329 aa16.35■□□□□ 0.21
BRAT1-203ENST00000467558 MTMR7Q9Y216 660 aa16.35■□□□□ 0.21
BRAT1-203ENST00000467558 LINS1Q8NG48 757 aa16.34■□□□□ 0.21
BRAT1-203ENST00000467558 CCDC69A6NI79 296 aa16.34■□□□□ 0.21
BRAT1-203ENST00000467558 GPTP24298 496 aa16.34■□□□□ 0.21
BRAT1-203ENST00000467558 GRM8O00222 908 aa16.34■□□□□ 0.21
BRAT1-203ENST00000467558 CDKL5O76039 1030 aa16.34■□□□□ 0.21
BRAT1-203ENST00000467558 ATP2B1P20020 1258 aa16.34■□□□□ 0.21
BRAT1-203ENST00000467558 ABCF2Q9UG63 623 aa16.34■□□□□ 0.21
BRAT1-203ENST00000467558 PLA2R1Q13018 1463 aa16.34■□□□□ 0.21
BRAT1-203ENST00000467558 ARAP3Q8WWN8 1544 aa16.34■□□□□ 0.21
BRAT1-203ENST00000467558 SMC5Q8IY18 1101 aa16.33■□□□□ 0.21
BRAT1-203ENST00000467558 DCAF5Q96JK2 942 aa16.33■□□□□ 0.21
BRAT1-203ENST00000467558 ORAI2Q96SN7 254 aa16.33■□□□□ 0.2
BRAT1-203ENST00000467558 KDM5CP41229 1560 aa16.33■□□□□ 0.2
BRAT1-203ENST00000467558 NFATC2IPQ8NCF5 419 aa16.33■□□□□ 0.2
BRAT1-203ENST00000467558 KDM4AO75164 1064 aa16.33■□□□□ 0.2
BRAT1-203ENST00000467558 IL2RBP14784 551 aa16.33■□□□□ 0.2
BRAT1-203ENST00000467558 DCTPP1Q9H773 170 aa16.33■□□□□ 0.2
BRAT1-203ENST00000467558 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
BRAT1-203ENST00000467558 LDHAL6AQ6ZMR3 332 aa16.32■□□□□ 0.2
BRAT1-203ENST00000467558 SH2B1Q9NRF2 756 aaPredicted RBP16.32■□□□□ 0.2
BRAT1-203ENST00000467558 KDM5AP29375 1690 aaKnown RBP16.32■□□□□ 0.2
BRAT1-203ENST00000467558 CHL1O00533 1208 aa16.32■□□□□ 0.2
BRAT1-203ENST00000467558 PDE1AP54750 535 aa16.32■□□□□ 0.2
BRAT1-203ENST00000467558 CAVIN4Q5BKX8 364 aa16.32■□□□□ 0.2
BRAT1-203ENST00000467558 UBAC1Q9BSL1 405 aa16.32■□□□□ 0.2
BRAT1-203ENST00000467558 TSPY26PQ9H489 355 aa16.32■□□□□ 0.2
BRAT1-203ENST00000467558 TCEAL9Q9UHQ7 104 aa16.32■□□□□ 0.2
BRAT1-203ENST00000467558 TOM1O60784 492 aa16.31■□□□□ 0.2
BRAT1-203ENST00000467558 CEBPZQ03701 1054 aaKnown RBP16.31■□□□□ 0.2
BRAT1-203ENST00000467558 OLFM4Q6UX06 510 aa16.31■□□□□ 0.2
BRAT1-203ENST00000467558 SDSP20132 328 aa16.31■□□□□ 0.2
BRAT1-203ENST00000467558 UGGT1Q9NYU2 1555 aa16.31■□□□□ 0.2
BRAT1-203ENST00000467558 HECW2Q9P2P5 1572 aa16.31■□□□□ 0.2
BRAT1-203ENST00000467558 ERVK-7P63135 1459 aa16.31■□□□□ 0.2
BRAT1-203ENST00000467558 SF3B2Q13435 895 aaKnown RBP16.31■□□□□ 0.2
BRAT1-203ENST00000467558 CFAP45Q9UL16 551 aa16.31■□□□□ 0.2
BRAT1-203ENST00000467558 RNMTO43148 476 aaKnown RBP16.31■□□□□ 0.2
BRAT1-203ENST00000467558 HMGB1P09429 215 aaKnown RBP16.31■□□□□ 0.2
BRAT1-203ENST00000467558 MAP3K12Q12852 859 aa16.31■□□□□ 0.2
BRAT1-203ENST00000467558 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
BRAT1-203ENST00000467558 SLC5A1P13866 664 aa16.3■□□□□ 0.2
BRAT1-203ENST00000467558 IL27Q8NEV9 243 aa16.3■□□□□ 0.2
BRAT1-203ENST00000467558 RNF123Q5XPI4 1314 aa16.3■□□□□ 0.2
BRAT1-203ENST00000467558 CEP85Q6P2H3 762 aa16.3■□□□□ 0.2
BRAT1-203ENST00000467558 TSHZ3Q63HK5 1081 aa16.3■□□□□ 0.2
BRAT1-203ENST00000467558 LIMCH1Q9UPQ0 1083 aa16.3■□□□□ 0.2
BRAT1-203ENST00000467558 EFCAB6Q5THR3 1501 aa16.3■□□□□ 0.2
BRAT1-203ENST00000467558 IPO7O95373 1038 aaKnown RBP16.29■□□□□ 0.2
BRAT1-203ENST00000467558 ME1P48163 572 aa16.29■□□□□ 0.2
BRAT1-203ENST00000467558 STK11IPQ8N1F8 1099 aa16.29■□□□□ 0.2
BRAT1-203ENST00000467558 NUP133Q8WUM0 1156 aa16.29■□□□□ 0.2
BRAT1-203ENST00000467558 ZBTB7BO15156 539 aaPredicted RBP16.29■□□□□ 0.2
BRAT1-203ENST00000467558 HOXB7P09629 217 aa16.29■□□□□ 0.2
BRAT1-203ENST00000467558 CCDC83Q8IWF9 413 aa16.29■□□□□ 0.2
BRAT1-203ENST00000467558 IKQ13123 557 aaPredicted RBP16.28■□□□□ 0.2
BRAT1-203ENST00000467558 PRDM15P57071 1507 aaPredicted RBP16.28■□□□□ 0.2
BRAT1-203ENST00000467558 SPATA32Q96LK8 384 aa16.28■□□□□ 0.2
BRAT1-203ENST00000467558 CCDC192P0DO97 292 aa16.27■□□□□ 0.2
BRAT1-203ENST00000467558 CCDC39Q9UFE4 941 aa16.27■□□□□ 0.2
BRAT1-203ENST00000467558 METP08581 1390 aa16.27■□□□□ 0.2
BRAT1-203ENST00000467558 JARID2Q92833 1246 aaPredicted RBP16.27■□□□□ 0.2
BRAT1-203ENST00000467558 PCMTD1Q96MG8 357 aaPredicted RBP16.27■□□□□ 0.2
BRAT1-203ENST00000467558 NAPBQ9H115 298 aa16.27■□□□□ 0.2
BRAT1-203ENST00000467558 DDX21Q9NR30 783 aaKnown RBP eCLIP16.27■□□□□ 0.2
BRAT1-203ENST00000467558 C8orf34Q49A92 452 aa16.27■□□□□ 0.19
BRAT1-203ENST00000467558 CDC5LQ99459 802 aaKnown RBP16.27■□□□□ 0.19
BRAT1-203ENST00000467558 GOLIM4O00461 696 aa16.27■□□□□ 0.19
BRAT1-203ENST00000467558 TXLNAP40222 546 aa16.27■□□□□ 0.19
BRAT1-203ENST00000467558 FAM43AQ8N2R8 423 aa16.27■□□□□ 0.19
BRAT1-203ENST00000467558 TRIM5Q9C035 493 aa16.26■□□□□ 0.19
BRAT1-203ENST00000467558 PLEKHG1Q9ULL1 1385 aa16.26■□□□□ 0.19
BRAT1-203ENST00000467558 SAMD1Q6SPF0 538 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms