RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 CEP152O94986 1710 aa7.79□□□□□ -1.16
VPS41-211ENST00000466017 SPHKAPQ2M3C7 1700 aa7.79□□□□□ -1.16
VPS41-211ENST00000466017 SIGLEC1Q9BZZ2 1709 aa7.79□□□□□ -1.16
VPS41-211ENST00000466017 ADH1CP00326 375 aa7.79□□□□□ -1.16
VPS41-211ENST00000466017 BMP1P13497 986 aa7.79□□□□□ -1.16
VPS41-211ENST00000466017 SMCPP49901 116 aaPredicted RBP7.79□□□□□ -1.16
VPS41-211ENST00000466017 TRIM46Q7Z4K8 759 aa7.79□□□□□ -1.16
VPS41-211ENST00000466017 TBC1D2BQ9UPU7 963 aa7.79□□□□□ -1.16
VPS41-211ENST00000466017 FBXO45P0C2W1 286 aa7.78□□□□□ -1.16
VPS41-211ENST00000466017 TIMP2P16035 220 aa7.78□□□□□ -1.16
VPS41-211ENST00000466017 IDI1Q13907 227 aa7.78□□□□□ -1.16
VPS41-211ENST00000466017 TRMT44Q8IYL2 757 aaKnown RBP7.78□□□□□ -1.16
VPS41-211ENST00000466017 ITPKCQ96DU7 683 aa7.78□□□□□ -1.16
VPS41-211ENST00000466017 MROH2AA6NES4 1674 aa7.78□□□□□ -1.16
VPS41-211ENST00000466017 SPATA31D1Q6ZQQ2 1576 aa7.77□□□□□ -1.17
VPS41-211ENST00000466017 IRF5Q13568 498 aa7.77□□□□□ -1.17
VPS41-211ENST00000466017 ZNF787Q6DD87 383 aa7.77□□□□□ -1.17
VPS41-211ENST00000466017 GPKOWQ92917 476 aaPredicted RBP eCLIP7.77□□□□□ -1.17
VPS41-211ENST00000466017 ERVK-7P63135 1459 aa7.76□□□□□ -1.17
VPS41-211ENST00000466017 FSHRP23945 695 aa7.76□□□□□ -1.17
VPS41-211ENST00000466017 PTK2Q05397 1052 aa7.76□□□□□ -1.17
VPS41-211ENST00000466017 MLECQ14165 292 aa7.76□□□□□ -1.17
VPS41-211ENST00000466017 NBPF8Q3BBV2 869 aa7.76□□□□□ -1.17
VPS41-211ENST00000466017 VASH1Q7L8A9 365 aaPredicted RBP7.76□□□□□ -1.17
VPS41-211ENST00000466017 ZBTB33Q86T24 672 aa7.76□□□□□ -1.17
VPS41-211ENST00000466017 ATP13A2Q9NQ11 1180 aa7.76□□□□□ -1.17
VPS41-211ENST00000466017 PIK3C2BO00750 1634 aa7.76□□□□□ -1.17
VPS41-211ENST00000466017 ZFYVE9O95405 1425 aa7.76□□□□□ -1.17
VPS41-211ENST00000466017 CLTCL1P53675 1640 aa7.75□□□□□ -1.17
VPS41-211ENST00000466017 CAPN5O15484 640 aaPredicted RBP7.75□□□□□ -1.17
VPS41-211ENST00000466017 SNRPBP14678 240 aaKnown RBP7.75□□□□□ -1.17
VPS41-211ENST00000466017 WDR4P57081 412 aaKnown RBP7.75□□□□□ -1.17
VPS41-211ENST00000466017 DCAF11Q8TEB1 546 aa7.75□□□□□ -1.17
VPS41-211ENST00000466017 POM121Q96HA1 1249 aa7.75□□□□□ -1.17
VPS41-211ENST00000466017 PREX1Q8TCU6 1659 aa7.75□□□□□ -1.17
VPS41-211ENST00000466017 CLTCQ00610 1675 aaKnown RBP7.74□□□□□ -1.17
VPS41-211ENST00000466017 KIF1BO60333 1816 aa7.74□□□□□ -1.17
VPS41-211ENST00000466017 MCM6Q14566 821 aa7.74□□□□□ -1.17
VPS41-211ENST00000466017 CTC1Q2NKJ3 1217 aa7.74□□□□□ -1.17
VPS41-211ENST00000466017 RGL3Q3MIN7 710 aa7.74□□□□□ -1.17
VPS41-211ENST00000466017 KCTD15Q96SI1 283 aaPredicted RBP7.74□□□□□ -1.17
VPS41-211ENST00000466017 GDPD2Q9HCC8 539 aa7.74□□□□□ -1.17
VPS41-211ENST00000466017 TMPRSS4Q9NRS4 437 aa7.74□□□□□ -1.17
VPS41-211ENST00000466017 SYNMO15061 1565 aa7.74□□□□□ -1.17
VPS41-211ENST00000466017 ZC3H4Q9UPT8 1303 aaKnown RBP7.74□□□□□ -1.17
VPS41-211ENST00000466017 CFAP65Q6ZU64 1925 aaKnown RBP7.74□□□□□ -1.17
VPS41-211ENST00000466017 SETD1BQ9UPS6 1966 aaKnown RBP7.73□□□□□ -1.17
VPS41-211ENST00000466017 ADAMTSL3P82987 1691 aa7.73□□□□□ -1.17
VPS41-211ENST00000466017 ADGRB3O60242 1522 aa7.73□□□□□ -1.17
VPS41-211ENST00000466017 GPRASP1Q5JY77 1395 aa7.73□□□□□ -1.17
VPS41-211ENST00000466017 PRAG1Q86YV5 1406 aa7.73□□□□□ -1.17
VPS41-211ENST00000466017 ZIC2O95409 532 aaPredicted RBP7.73□□□□□ -1.17
VPS41-211ENST00000466017 RAB15P59190 212 aa7.73□□□□□ -1.17
VPS41-211ENST00000466017 CBLBQ13191 982 aa7.73□□□□□ -1.17
VPS41-211ENST00000466017 INTS6LQ5JSJ4 861 aaKnown RBP7.73□□□□□ -1.17
VPS41-211ENST00000466017 MAP4K5Q9Y4K4 846 aa7.73□□□□□ -1.17
VPS41-211ENST00000466017 MYOM2P54296 1465 aa7.73□□□□□ -1.17
VPS41-211ENST00000466017 NRXN1Q9ULB1 1477 aa7.73□□□□□ -1.17
VPS41-211ENST00000466017 TNRQ92752 1358 aa7.72□□□□□ -1.17
VPS41-211ENST00000466017 ZBBXA8MT70 800 aa7.72□□□□□ -1.17
VPS41-211ENST00000466017 GIGYF1O75420 1035 aaPredicted RBP7.72□□□□□ -1.17
VPS41-211ENST00000466017 NR5A1Q13285 461 aa7.72□□□□□ -1.17
VPS41-211ENST00000466017 TMEM132AQ24JP5 1023 aa7.72□□□□□ -1.17
VPS41-211ENST00000466017 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.72□□□□□ -1.17
VPS41-211ENST00000466017 GPSM3Q9Y4H4 160 aa7.72□□□□□ -1.17
VPS41-211ENST00000466017 NLRP1Q9C000 1473 aa7.72□□□□□ -1.17
VPS41-211ENST00000466017 KDM5AP29375 1690 aaKnown RBP7.72□□□□□ -1.17
VPS41-211ENST00000466017 RALGAPBQ86X10 1494 aa7.71□□□□□ -1.18
VPS41-211ENST00000466017 EIF4G2P78344 907 aaKnown RBP eCLIP7.71□□□□□ -1.18
VPS41-211ENST00000466017 TSGA10IPQ3SY00 556 aa7.71□□□□□ -1.18
VPS41-211ENST00000466017 PPP1R26Q5T8A7 1209 aaPredicted RBP7.71□□□□□ -1.18
VPS41-211ENST00000466017 C14orf93Q9H972 538 aaKnown RBP7.71□□□□□ -1.18
VPS41-211ENST00000466017 NDUFB9Q9Y6M9 179 aa7.71□□□□□ -1.18
VPS41-211ENST00000466017 TMEM131LA2VDJ0 1609 aa7.7□□□□□ -1.18
VPS41-211ENST00000466017 SOBPA7XYQ1 873 aa7.7□□□□□ -1.18
VPS41-211ENST00000466017 ADD1P35611 737 aaKnown RBP7.7□□□□□ -1.18
VPS41-211ENST00000466017 ZNF775Q96BV0 537 aaPredicted RBP7.7□□□□□ -1.18
VPS41-211ENST00000466017 ZFP42Q96MM3 310 aa7.7□□□□□ -1.18
VPS41-211ENST00000466017 PCDHB9Q9Y5E1 797 aa7.7□□□□□ -1.18
VPS41-211ENST00000466017 UGGT1Q9NYU2 1555 aa7.7□□□□□ -1.18
VPS41-211ENST00000466017 KIAA1210Q9ULL0 1709 aa7.69□□□□□ -1.18
VPS41-211ENST00000466017 A2ML1A8K2U0 1454 aa7.69□□□□□ -1.18
VPS41-211ENST00000466017 FER1L4A9Z1Z3 1794 aa7.69□□□□□ -1.18
VPS41-211ENST00000466017 ESPNB1AK53 854 aa7.69□□□□□ -1.18
VPS41-211ENST00000466017 ERVH48-1M5A8F1 160 aa7.69□□□□□ -1.18
VPS41-211ENST00000466017 CEBPAP49715 358 aaPredicted RBP7.69□□□□□ -1.18
VPS41-211ENST00000466017 NR1H3Q13133 447 aa7.69□□□□□ -1.18
VPS41-211ENST00000466017 ZNF326Q5BKZ1 582 aaKnown RBP7.69□□□□□ -1.18
VPS41-211ENST00000466017 DZIP3Q86Y13 1208 aaKnown RBP7.69□□□□□ -1.18
VPS41-211ENST00000466017 CCDC116Q8IYX3 515 aa7.69□□□□□ -1.18
VPS41-211ENST00000466017 THEMISQ8N1K5 641 aaPredicted RBP7.69□□□□□ -1.18
VPS41-211ENST00000466017 KDF1Q8NAX2 398 aaPredicted RBP7.69□□□□□ -1.18
VPS41-211ENST00000466017 SLC10A4Q96EP9 437 aa7.69□□□□□ -1.18
VPS41-211ENST00000466017 PURBQ96QR8 312 aaKnown RBP7.69□□□□□ -1.18
VPS41-211ENST00000466017 COG6Q9Y2V7 657 aa7.69□□□□□ -1.18
VPS41-211ENST00000466017 ADGRF5Q8IZF2 1346 aa7.69□□□□□ -1.18
VPS41-211ENST00000466017 C3P01024 1663 aa7.69□□□□□ -1.18
VPS41-211ENST00000466017 IFT172Q9UG01 1749 aa7.69□□□□□ -1.18
VPS41-211ENST00000466017 LAMC1P11047 1609 aa7.68□□□□□ -1.18
VPS41-211ENST00000466017 C11orf95C9JLR9 678 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms