RNA–Protein interactions for RNA: ENST00000462852.5

VPS45-205, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-205ENST00000462852 TJAP1Q5JTD0 557 aa11.48□□□□□ -0.57
VPS45-205ENST00000462852 TMC1Q8TDI8 760 aa11.48□□□□□ -0.57
VPS45-205ENST00000462852 TMEM134Q9H6X4 195 aa11.48□□□□□ -0.57
VPS45-205ENST00000462852 NPHP3Q7Z494 1330 aa11.48□□□□□ -0.57
VPS45-205ENST00000462852 USP31Q70CQ4 1352 aa11.48□□□□□ -0.57
VPS45-205ENST00000462852 BLMP54132 1417 aaPredicted RBP11.48□□□□□ -0.57
VPS45-205ENST00000462852 CGNL1Q0VF96 1302 aa11.47□□□□□ -0.57
VPS45-205ENST00000462852 RALBP1Q15311 655 aa11.47□□□□□ -0.57
VPS45-205ENST00000462852 CC2D1BQ5T0F9 858 aaKnown RBP11.47□□□□□ -0.57
VPS45-205ENST00000462852 COL22A1Q8NFW1 1626 aaPredicted RBP11.46□□□□□ -0.57
VPS45-205ENST00000462852 ATRNO75882 1429 aa11.46□□□□□ -0.57
VPS45-205ENST00000462852 GNPATO15228 680 aa11.46□□□□□ -0.57
VPS45-205ENST00000462852 PXYLP1Q8TE99 480 aa11.46□□□□□ -0.57
VPS45-205ENST00000462852 TERF2IPQ9NYB0 399 aa11.46□□□□□ -0.57
VPS45-205ENST00000462852 KNSTRNQ9Y448 316 aa11.46□□□□□ -0.57
VPS45-205ENST00000462852 TTC21BQ7Z4L5 1316 aa11.45□□□□□ -0.58
VPS45-205ENST00000462852 FYB1O15117 783 aa11.45□□□□□ -0.58
VPS45-205ENST00000462852 PPP2R1AP30153 589 aa11.45□□□□□ -0.58
VPS45-205ENST00000462852 ESCO1Q5FWF5 840 aa11.45□□□□□ -0.58
VPS45-205ENST00000462852 CCDC125Q86Z20 511 aa11.45□□□□□ -0.58
VPS45-205ENST00000462852 MTRQ99707 1265 aa11.45□□□□□ -0.58
VPS45-205ENST00000462852 COL18A1P39060 1754 aa11.45□□□□□ -0.58
VPS45-205ENST00000462852 LMO7Q8WWI1 1683 aa11.45□□□□□ -0.58
VPS45-205ENST00000462852 AATKQ6ZMQ8 1374 aa11.44□□□□□ -0.58
VPS45-205ENST00000462852 HDGFL2Q7Z4V5 671 aaPredicted RBP11.44□□□□□ -0.58
VPS45-205ENST00000462852 NLRP13Q86W25 1043 aa11.44□□□□□ -0.58
VPS45-205ENST00000462852 INSRP06213 1382 aa11.43□□□□□ -0.58
VPS45-205ENST00000462852 NME9Q86XW9 330 aa11.43□□□□□ -0.58
VPS45-205ENST00000462852 NECTIN2Q92692 538 aa11.43□□□□□ -0.58
VPS45-205ENST00000462852 TNS3Q68CZ2 1445 aa11.43□□□□□ -0.58
VPS45-205ENST00000462852 TTC21AQ8NDW8 1320 aa11.42□□□□□ -0.58
VPS45-205ENST00000462852 ABCC6O95255 1503 aa11.42□□□□□ -0.58
VPS45-205ENST00000462852 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.42□□□□□ -0.58
VPS45-205ENST00000462852 OATP04181 439 aa11.42□□□□□ -0.58
VPS45-205ENST00000462852 METTL3Q86U44 580 aaKnown RBP11.42□□□□□ -0.58
VPS45-205ENST00000462852 GPIHBP1Q8IV16 184 aa11.42□□□□□ -0.58
VPS45-205ENST00000462852 PMFBP1Q8TBY8 1022 aa11.42□□□□□ -0.58
VPS45-205ENST00000462852 GGNBP2Q9H3C7 697 aa11.42□□□□□ -0.58
VPS45-205ENST00000462852 USP19O94966 1318 aa11.41□□□□□ -0.58
VPS45-205ENST00000462852 BCL9LQ86UU0 1499 aa11.41□□□□□ -0.58
VPS45-205ENST00000462852 FOXO3O43524 673 aa11.41□□□□□ -0.58
VPS45-205ENST00000462852 SLC4A3P48751 1232 aa11.41□□□□□ -0.58
VPS45-205ENST00000462852 GJD4Q96KN9 370 aaPredicted RBP11.41□□□□□ -0.58
VPS45-205ENST00000462852 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
VPS45-205ENST00000462852 EP400Q96L91 3159 aa11.4□□□□□ -0.58
VPS45-205ENST00000462852 FAM208AQ9UK61 1670 aaKnown RBP11.4□□□□□ -0.58
VPS45-205ENST00000462852 RGS20O76081 388 aa11.4□□□□□ -0.58
VPS45-205ENST00000462852 ZNF516Q92618 1163 aa11.4□□□□□ -0.58
VPS45-205ENST00000462852 RGPD2P0DJD1 1756 aa11.4□□□□□ -0.58
VPS45-205ENST00000462852 RGPD5Q99666 1765 aa11.4□□□□□ -0.58
VPS45-205ENST00000462852 SBNO1A3KN83 1393 aa11.4□□□□□ -0.59
VPS45-205ENST00000462852 MRS2Q9HD23 443 aa11.39□□□□□ -0.59
VPS45-205ENST00000462852 XPCQ01831 940 aaPredicted RBP11.38□□□□□ -0.59
VPS45-205ENST00000462852 CNGB1Q14028 1251 aaPredicted RBP11.38□□□□□ -0.59
VPS45-205ENST00000462852 UNC5CLQ8IV45 518 aa11.38□□□□□ -0.59
VPS45-205ENST00000462852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.38□□□□□ -0.59
VPS45-205ENST00000462852 PNISRQ8TF01 805 aaKnown RBP11.38□□□□□ -0.59
VPS45-205ENST00000462852 NCAPD2Q15021 1401 aa11.37□□□□□ -0.59
VPS45-205ENST00000462852 SLC10A3P09131 477 aa11.37□□□□□ -0.59
VPS45-205ENST00000462852 SPATA31A3Q5VYP0 1347 aa11.36□□□□□ -0.59
VPS45-205ENST00000462852 SLIT2O94813 1529 aa11.36□□□□□ -0.59
VPS45-205ENST00000462852 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.36□□□□□ -0.59
VPS45-205ENST00000462852 COPS2P61201 443 aa11.36□□□□□ -0.59
VPS45-205ENST00000462852 SF3B2Q13435 895 aaKnown RBP11.36□□□□□ -0.59
VPS45-205ENST00000462852 LRRC37A3O60309 1634 aa11.35□□□□□ -0.59
VPS45-205ENST00000462852 NRAPQ86VF7 1730 aa11.35□□□□□ -0.59
VPS45-205ENST00000462852 WNK3Q9BYP7 1800 aa11.35□□□□□ -0.59
VPS45-205ENST00000462852 PSME1Q06323 249 aa11.35□□□□□ -0.59
VPS45-205ENST00000462852 MORC1Q86VD1 984 aa11.35□□□□□ -0.59
VPS45-205ENST00000462852 NGDNQ8NEJ9 315 aaKnown RBP11.35□□□□□ -0.59
VPS45-205ENST00000462852 RTL1A6NKG5 1358 aa11.35□□□□□ -0.59
VPS45-205ENST00000462852 DLG5Q8TDM6 1919 aa11.35□□□□□ -0.59
VPS45-205ENST00000462852 FBLN1P23142 703 aa11.34□□□□□ -0.59
VPS45-205ENST00000462852 KRT28Q7Z3Y7 464 aa11.34□□□□□ -0.59
VPS45-205ENST00000462852 NLRP7Q8WX94 980 aa11.34□□□□□ -0.59
VPS45-205ENST00000462852 PHOX2BQ99453 314 aa11.34□□□□□ -0.59
VPS45-205ENST00000462852 PRR14Q9BWN1 585 aa11.34□□□□□ -0.59
VPS45-205ENST00000462852 POLKQ9UBT6 870 aa11.34□□□□□ -0.59
VPS45-205ENST00000462852 EMILIN1Q9Y6C2 1016 aa11.34□□□□□ -0.59
VPS45-205ENST00000462852 PLCH1Q4KWH8 1693 aa11.33□□□□□ -0.6
VPS45-205ENST00000462852 KIF24Q5T7B8 1368 aa11.33□□□□□ -0.6
VPS45-205ENST00000462852 CFHP08603 1231 aa11.33□□□□□ -0.6
VPS45-205ENST00000462852 NKX2-3Q8TAU0 364 aa11.33□□□□□ -0.6
VPS45-205ENST00000462852 PCDHB3Q9Y5E6 796 aa11.33□□□□□ -0.6
VPS45-205ENST00000462852 GLI3P10071 1580 aa11.33□□□□□ -0.6
VPS45-205ENST00000462852 SHANK3Q9BYB0 1731 aa11.32□□□□□ -0.6
VPS45-205ENST00000462852 ARHGEF10O15013 1369 aa11.32□□□□□ -0.6
VPS45-205ENST00000462852 MTHFSP49914 203 aa11.32□□□□□ -0.6
VPS45-205ENST00000462852 VPS72Q15906 364 aa11.32□□□□□ -0.6
VPS45-205ENST00000462852 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
VPS45-205ENST00000462852 MAP3K19Q56UN5 1328 aa11.32□□□□□ -0.6
VPS45-205ENST00000462852 FLT4P35916 1363 aa11.31□□□□□ -0.6
VPS45-205ENST00000462852 TULP1O00294 542 aaPredicted RBP11.31□□□□□ -0.6
VPS45-205ENST00000462852 ACTN4O43707 911 aaKnown RBP11.31□□□□□ -0.6
VPS45-205ENST00000462852 TNNT2P45379 298 aaPredicted RBP11.31□□□□□ -0.6
VPS45-205ENST00000462852 SEPT12Q8IYM1 358 aa11.31□□□□□ -0.6
VPS45-205ENST00000462852 COG3Q96JB2 828 aa11.31□□□□□ -0.6
VPS45-205ENST00000462852 CCDC9Q9Y3X0 531 aaKnown RBP11.31□□□□□ -0.6
VPS45-205ENST00000462852 VIRMAQ69YN4 1812 aaKnown RBP11.3□□□□□ -0.6
VPS45-205ENST00000462852 PKD1L3Q7Z443 1732 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms