RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 STRCQ7RTU9 1775 aa5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 MED1Q15648 1581 aaPredicted RBP5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 SRGAP3O43295 1099 aa5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 FAM98CQ17RN3 349 aaKnown RBP5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 ANKRD13DQ6ZTN6 518 aa5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 ANKRD44Q8N8A2 993 aa5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 LINS1Q8NG48 757 aa5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 MYD88Q99836 296 aa5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 OVOS2A0A0G2JMS6 1433 aa5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 UNC5CLQ8IV45 518 aa5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 SMARCC1Q92922 1105 aaPredicted RBP5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 ACSBG1Q96GR2 724 aa5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 THRAP3Q9Y2W1 955 aaKnown RBP5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 PLEKHG2Q9H7P9 1386 aa5.09□□□□□ -1.59
ATP13A3-206ENST00000461660 PIP4K2AP48426 406 aaPredicted RBP5.09□□□□□ -1.6
ATP13A3-206ENST00000461660 PRIM1P49642 420 aaKnown RBP5.09□□□□□ -1.6
ATP13A3-206ENST00000461660 G3BP1Q13283 466 aaKnown RBP eCLIP5.09□□□□□ -1.6
ATP13A3-206ENST00000461660 ZBTB3Q9H5J0 574 aa5.09□□□□□ -1.6
ATP13A3-206ENST00000461660 ERBB4Q15303 1308 aa5.09□□□□□ -1.6
ATP13A3-206ENST00000461660 LTN1O94822 1766 aa5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 SMC5Q8IY18 1101 aa5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 KAT6BQ8WYB5 2073 aa5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 STRCP1A6NGW2 1772 aa5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 GRM8O00222 908 aa5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 GTF2E1P29083 439 aaPredicted RBP5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 CACNB1Q02641 598 aaPredicted RBP5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 BECN1Q14457 450 aa5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 CEP85Q6P2H3 762 aa5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 LRRCC1Q9C099 1032 aa5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 EXOC6BQ9Y2D4 811 aa5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 USP16Q9Y5T5 823 aa5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 SPATA31A6Q5VVP1 1343 aa5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 ABCC6O95255 1503 aa5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 CAMTA1Q9Y6Y1 1673 aa5.08□□□□□ -1.6
ATP13A3-206ENST00000461660 TRIM6-TRIM34B2RNG4 842 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 MFAP1P55081 439 aaKnown RBP5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 ERC1Q8IUD2 1116 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 DNAJC10Q8IXB1 793 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 CLASRPQ8N2M8 674 aaKnown RBP5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 BACH2Q9BYV9 841 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 TRPM3Q9HCF6 1732 aaPredicted RBP5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 HEG1Q9ULI3 1381 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 A0A087WZG4 1122 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 PRAMEF22A3QJZ6 481 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 ATP5J2-PTCD1G3V325 749 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 IFIT2P09913 472 aaKnown RBP5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 PROSER3Q2NL68 480 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 HSP90AB3PQ58FF7 597 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 RTL5Q5HYW3 569 aaPredicted RBP5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 SPATA31A1Q5TZJ5 1347 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 A1BGP04217 495 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 NUCB1Q02818 461 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 CWF19L2Q2TBE0 894 aaKnown RBP5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 UBE3BQ7Z3V4 1068 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 PPP1R42Q7Z4L9 355 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 CWC25Q9NXE8 425 aaPredicted RBP5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 ASAP1Q9ULH1 1129 aa5.07□□□□□ -1.6
ATP13A3-206ENST00000461660 KDM6AO15550 1401 aaPredicted RBP5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 RAB11FIP3O75154 756 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 HSP90AA1P07900 732 aaKnown RBP5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 HSPA1LP34931 641 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 ATP6V1AP38606 617 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 ATP8B2P98198 1209 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 NKX1-1Q15270 411 aaPredicted RBP5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 PLBD2Q8NHP8 589 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 PIGBQ92521 554 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 METTL22Q9BUU2 404 aaPredicted RBP5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 DCTPP1Q9H773 170 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 ALS2Q96Q42 1657 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 HSP90B1P14625 803 aaKnown RBP5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 GORABQ5T7V8 394 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 KIF1BPQ96EK5 621 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 TRPC5Q9UL62 973 aaPredicted RBP5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 RGPD1P0DJD0 1748 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 SPATA31A5Q5VU36 1347 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 SPATA31A7Q8IWB4 1347 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 CDC45O75419 566 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 VPS72Q15906 364 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 BEND3Q5T5X7 828 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 RILPL2Q969X0 211 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 USP44Q9H0E7 712 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 IL1RAPL2Q9NP60 686 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 ZNF652Q9Y2D9 606 aa5.06□□□□□ -1.6
ATP13A3-206ENST00000461660 USP54Q70EL1 1684 aa5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 ERC2O15083 957 aa5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 SMARCA5O60264 1052 aaPredicted RBP5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 SIL1Q9H173 461 aa5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 ROBO1Q9Y6N7 1651 aa5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 AFF2P51816 1311 aa5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 FAM177BA6PVY3 158 aa5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 MCCP23508 829 aa5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 GPTP24298 496 aa5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 BARGINQ6ZT62 677 aa5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 KIAA1211Q6ZU35 1233 aa5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 VSIG10Q8N0Z9 540 aa5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 PHRF1Q9P1Y6 1649 aaKnown RBP5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 NBPF7P0C2Y1 421 aaPredicted RBP5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 GCKRQ14397 625 aa5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 CCDC57Q2TAC2 916 aa5.05□□□□□ -1.6
ATP13A3-206ENST00000461660 ATG3Q9NT62 314 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms